Optimized PCR amplification of influenza A virus RNA using Tth DNA polymerase, incorporating uracil N glycosylase (UNG) in a single tube reaction.

Abstract:

:An optimized reaction condition for amplification of influenza A virus RNA, by thermus thermophilus (Tth) DNA polymerase-based PCR, incorporating uracil N glycosylase (UNG) and dUTP in the reaction has been determined. dUTP could not be substituted for all dTTP sites when UNG was present in the reaction. The relative concentration of dUTP and dTTP has been optimized for allowing amplification of the target RNA. It has been verified that the amplified product DNA had sufficient dUTP and was digestable by UNG. Using the optimized reaction condition, influenza A virus-specific DNA fragment could be amplified and detected in 15 of 15 culture positive (for influenza A virus) nasopharyngeal specimens.

journal_name

J Clin Lab Anal

authors

Poddar SK,Sawyer MH,Connor JD

doi

10.1002/(sici)1098-2825(1997)11:6<323::aid-jcla2>3

subject

Has Abstract

pub_date

1997-01-01 00:00:00

pages

323-7

issue

6

eissn

0887-8013

issn

1098-2825

pii

10.1002/(SICI)1098-2825(1997)11:6<323::AID-JCLA2>3

journal_volume

11

pub_type

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