A new pathway for transmembrane electron transfer in photosynthetic reaction centers of Rhodobacter sphaeroides not involving the excited special pair.

Abstract:

:It is generally accepted that electron transfer in bacterial photosynthesis is driven by the first singlet excited state of a special pair of bacteriochlorophylls (P*). We have examined the first steps of electron transfer in a mutant of the Rhodobacter sphaeroides reaction center in which charge separation from P* is dramatically slowed down. The results provide for the first time clear evidence that excitation of the monomeric bacteriochlorophyll in the active branch of the reaction center (B(A)) drives ultrafast transmembrane electron transfer without the involvement of P*, demonstrating a new and efficient mechanism for solar energy transduction in photosynthesis. The most abundant charge-separated intermediate state probably is P+B(A)-, which is formed within 200 fs from B(A)* and decays with a lifetime of 6.5 ps into P+H(A)-. We also see evidence for the involvement of a B(A)+H(A)- state in the alternative pathway.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Van Brederode ME,Jones MR,Van Mourik F,Van Stokkum IH,Van Grondelle R

doi

10.1021/bi9703756

subject

Has Abstract

pub_date

1997-06-10 00:00:00

pages

6855-61

issue

23

eissn

0006-2960

issn

1520-4995

pii

bi9703756

journal_volume

36

pub_type

杂志文章
  • Three-dimensional structure of RK-1: a novel alpha-defensin peptide.

    abstract::NMR spectroscopy and simulated annealing calculations have been used to determine the three-dimensional structure of RK-1, an antimicrobial peptide from rabbit kidney recently discovered from homology screening based on the distinctive physicochemical properties of the corticostatins/defensins. RK-1 consists of 32 res...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi000457l

    authors: McManus AM,Dawson NF,Wade JD,Carrington LE,Winzor DJ,Craik DJ

    更新日期:2000-12-26 00:00:00

  • Channeling in sulfate activating complexes.

    abstract::The synthesis of activated sulfate (adenosine 5'-phosphosulfate, APS) and inorganic pyrophosphate from ATP and SO4 is remarkably unfavorable: K(eq) approximately 10(-8) under presumed, near-physiological conditions. Consequently, ATP sulfurylases, which catalyze APS synthesis, suffer approximately 10(8)-fold losses in...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi060421e

    authors: Sun M,Leyh TS

    更新日期:2006-09-26 00:00:00

  • P-Bodies: Composition, Properties, and Functions.

    abstract::Processing bodies (P-bodies) are cytoplasmic ribonucleoprotein (RNP) granules primarily composed of translationally repressed mRNAs and proteins related to mRNA decay, suggesting roles in post-transcriptional regulation. P-bodies are conserved in eukaryotic cells and exhibit properties of liquid droplets. However, the...

    journal_title:Biochemistry

    pub_type: 杂志文章,评审

    doi:10.1021/acs.biochem.7b01162

    authors: Luo Y,Na Z,Slavoff SA

    更新日期:2018-05-01 00:00:00

  • Morin inhibits the early stages of amyloid β-peptide aggregation by altering tertiary and quaternary interactions to produce "off-pathway" structures.

    abstract::Alzheimer's disease is a debilitating neurodegenerative disorder whose pathology has been linked to the aggregation and deposition of the amyloid β-peptide (Aβ) in neural tissue. A truly effective therapeutic agent remains elusive, and attention has recently turned to the use of natural products as effective antiaggre...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi300113x

    authors: Lemkul JA,Bevan DR

    更新日期:2012-07-31 00:00:00

  • Tryptophan 500 and arginine 707 define product and substrate active site binding in soybean lipoxygenase-1.

    abstract::There is much debate whether the fatty acid substrate of lipoxygenase binds "carboxylate-end first" or "methyl-end first" in the active site of soybean lipoxygenase-1 (sLO-1). To address this issue, we investigated the sLO-1 mutants Trp500Leu, Trp500Phe, Lys260Leu, and Arg707Leu with steady-state and stopped-flow kine...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0489098

    authors: Ruddat VC,Mogul R,Chorny I,Chen C,Perrin N,Whitman S,Kenyon V,Jacobson MP,Bernasconi CF,Holman TR

    更新日期:2004-10-19 00:00:00

  • hnRNP A2 selectively binds the cytoplasmic transport sequence of myelin basic protein mRNA.

    abstract::Segregation of mRNAs in the cytoplasm of polar cells has been demonstrated for proteins involved in Xenopus and Drosophila oogenesis, and for some proteins in somatic cells. It is assumed that vectorial transport of the messages is generally responsible for this localization. The mRNA encoding the basic protein of cen...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9800247

    authors: Hoek KS,Kidd GJ,Carson JH,Smith R

    更新日期:1998-05-12 00:00:00

  • Differential modulation of P-glycoprotein transport by protein kinase inhibition.

    abstract::Previous studies of P-glycoprotein have demonstrated that its function can be modulated by phosphorylation. In the present study, inhibition of protein kinase C with calphostin C or stauroporine or prolonged treatment with the phorbol ester TPA decreased phosphorylation of P-glycoprotein, and impaired transport of vin...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00086a022

    authors: Bates SE,Lee JS,Dickstein B,Spolyar M,Fojo AT

    更新日期:1993-09-07 00:00:00

  • Photochromic agents as tools for protein structure study: lapachenole is a photoaffinity ligand of cytochrome P450 3A4.

    abstract::Cytochrome P450 3A4 is a drug-metabolizing enzyme of extraordinarily broad substrate specificity. This quality imparts upon the enzyme special importance in understanding its determinants of activity and substrate recognition. Limited successes in P450 3A4 active-site structure studies have been achieved by use of mec...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi049231z

    authors: Gartner CA,Wen B,Wan J,Becker RS,Jones G 2nd,Gygi SP,Nelson SD

    更新日期:2005-02-15 00:00:00

  • Quantitative characterization of the binding of plasminogen to intact fibrin clots, lysine-sepharose, and fibrin cleaved by plasmin.

    abstract::The binding of human Glu- and Lys-plasminogens to intact fibrin clots, to lysine-Sepharose, and to fibrin cleaved by plasmin was quantitatively characterized. On intact fibrin clots, there was one strong binding site for Glu-plasminogen with a dissociation constant, Kd, of 25 microM and one strong binding site for Lys...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00334a031

    authors: Bok RA,Mangel WF

    更新日期:1985-06-18 00:00:00

  • Thermodynamic mapping of effector protein interfaces with RalA and RalB.

    abstract::RalA and RalB are members of the Ras family of small G proteins and are activated downstream of Ras via RalGEFs. The RalGEF-Ral axis represents one of the major effector pathways controlled by Ras and as such is an important pharmacological target. RalA and RalB are approximately 80% identical at the amino acid level;...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi501530u

    authors: Campbell LJ,Peppa M,Crabtree MD,Shafiq A,McGough NF,Mott HR,Owen D

    更新日期:2015-02-17 00:00:00

  • A high-affinity fluorenone-based beta 2-adrenergic receptor antagonist with a photoactivatable pharmacophore.

    abstract::To develop molecules capable of directly probing the catechol binding region of the beta(2)-adrenergic receptor (beta(2)AR), novel benzophenone- and fluorenone-based beta(2)AR antagonists were prepared as potential photoaffinity probes. While the benzophenone-containing ligands bound with relatively modest affinity, o...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi001342k

    authors: Wu Z,Ruoho AE

    更新日期:2000-10-24 00:00:00

  • Picosecond infrared study of the photodynamics of carbonmonoxy-cytochrome c oxidase.

    abstract::Time-resolved infrared (TRIR) techniques have been employed to study the reactions of carbon monoxide with the cytochrome alpha 3-Cu(B) site of cytochrome c oxidase (CcO). The ligation dynamics immediately following photodissociation have been investigated using picosecond TRIR spectroscopy and linear dichroism. The r...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00168a015

    authors: Dyer RB,Peterson KA,Stoutland PO,Woodruff WH

    更新日期:1994-01-18 00:00:00

  • Analyzing the Folding and Binding Steps of an Intrinsically Disordered Protein by Protein Engineering.

    abstract::Intrinsically disordered proteins (IDPs) are functionally active despite lacking a well-defined three-dimensional structure. Such proteins often undergo a disorder-to-order transition, or induced folding, when binding to their specific physiological partner. Because of cooperativity, the folding and binding steps typi...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.7b00350

    authors: Bonetti D,Troilo F,Toto A,Brunori M,Longhi S,Gianni S

    更新日期:2017-07-25 00:00:00

  • Functional interaction of the c-Myc transactivation domain with the TATA binding protein: evidence for an induced fit model of transactivation domain folding.

    abstract::c-Myc is a member of a family of sequence specific-DNA binding proteins that are thought to regulate the transcription of genes involved in normal cell growth, differentiation, and apoptosis. In order to understand how human c-myc functions as a transcription factor, we have studied the mechanism of action and structu...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi960793v

    authors: McEwan IJ,Dahlman-Wright K,Ford J,Wright AP

    更新日期:1996-07-23 00:00:00

  • Functional roles of the invariant aspartic acid 55, tyrosine 306, and aspartic acid 309 in glucoamylase from Aspergillus awamori studied by mutagenesis.

    abstract::Three mutants, Asp55-Gly, Tyr306-->Phe, and Asp309-->Asn, of Aspergillus awamori glucoamylase (identical to Aspergillus niger glucoamylase) were constructed to elucidate the roles of two conserved regions within fungal glucoamylases. Kinetic studies indicate that both of these regions are closely associated with activ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00055a017

    authors: Sierks MR,Svensson B

    更新日期:1993-02-02 00:00:00

  • Novel mechanism for the activation of rhodopsin kinase: implications for other G protein-coupled receptor kinases (GRK's).

    abstract::ATP, its nonhydrolyzable analogue, AMP-PNP, and albumin were found to promote the dissociation of rhodopsin kinase from rod outer segments (ROS) containing photoactivated-rhodopsin (Rho*). These features were embodied in a protocol for the recovery of rhodopsin kinase from incubations containing ROS which had been sub...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi952480q

    authors: Dean KR,Akhtar M

    更新日期:1996-05-14 00:00:00

  • Treponema denticola PurE Is a bacterial AIR carboxylase.

    abstract::De novo purine biosynthesis proceeds by two divergent paths. In bacteria, yeasts, and plants, 5-aminoimidazole ribonucleotide (AIR) is converted to 4-carboxy-AIR (CAIR) by two enzymes: N(5)-carboxy-AIR (N(5)-CAIR) synthetase (PurK) and N(5)-CAIR mutase (class I PurE). In animals, the conversion of AIR to CAIR requires...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi102033a

    authors: Tranchimand S,Starks CM,Mathews II,Hockings SC,Kappock TJ

    更新日期:2011-05-31 00:00:00

  • Binding of verocytotoxin 1 to its receptor is influenced by differences in receptor fatty acid content.

    abstract::Globotriaosylceramide [(Gal alpha 1-4Gal beta 1-4Glc-ceramide (Gb3)] was separated from human kidney, and the fatty acid composition was determined. Semisynthetic Gb3 molecular species of corresponding fatty acid chain length were prepared and compared for verotoxin (VT) binding affinity by TLC overlay, and a quantita...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00120a011

    authors: Pellizzari A,Pang H,Lingwood CA

    更新日期:1992-02-11 00:00:00

  • Protection of satellite tobacco necrosis virus ribonucleic acid by wheat germ 40S and 80S ribosomes.

    abstract::Wheat germ ribosomes combine with the AUG codon at positions 30-32 from the 5' terminus of in vitro radioiodinated satellite tobacco necrosis virus (STNV) ribonucleic acid (RNA) to form initiation complexes that protect specific regions of the RNA from attack by ribonucleases. Wheat gern 80S ribosomes convey partial p...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00551a044

    authors: Browning KS,Leung DW,Clark JM Jr

    更新日期:1980-05-13 00:00:00

  • The hydrogen-bonding structure in parallel-stranded duplex DNA is reverse Watson-Crick.

    abstract::Raman spectra of the parallel-stranded duplex formed from the deoxyoligonucleotides 5'-d-[(A)10TAATTTTAAATATTT]-3' (D1) and 5'-d[(T)10ATTAAAATTTATAAA]-3' (D2) in H2O and D2O have been acquired. The spectra of the parallel-stranded DNA are then compared to the spectra of the antiparallel double helix formed from the de...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00226a012

    authors: Otto C,Thomas GA,Rippe K,Jovin TM,Peticolas WL

    更新日期:1991-03-26 00:00:00

  • Kinetic mechanism for the flipping and excision of 1,N(6)-ethenoadenine by AlkA.

    abstract::Escherichia coli 3-methyladenine DNA glycosylase II (AlkA), an adaptive response glycosylase with a broad substrate range, initiates base excision repair by flipping a lesion out of the DNA duplex and hydrolyzing the N-glycosidic bond. We used transient and steady state kinetics to determine the minimal mechanism for ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi501356x

    authors: Taylor EL,O'Brien PJ

    更新日期:2015-01-27 00:00:00

  • Solution structure and lipid membrane partitioning of VSTx1, an inhibitor of the KvAP potassium channel.

    abstract::VSTx1 is a voltage sensor toxin from the spider Grammostola spatulata that inhibits KvAP, an archeabacterial voltage-activated K(+) channel whose X-ray structure has been reported. Although the receptor for VSTx1 and the mechanism of inhibition are unknown, the sequence of the toxin is related to hanatoxin (HaTx) and ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0477034

    authors: Jung HJ,Lee JY,Kim SH,Eu YJ,Shin SY,Milescu M,Swartz KJ,Kim JI

    更新日期:2005-04-26 00:00:00

  • Rapid reaction kinetics of proline dehydrogenase in the multifunctional proline utilization A protein.

    abstract::The multifunctional proline utilization A (PutA) flavoenzyme from Escherichia coli catalyzes the oxidation of proline to glutamate in two reaction steps using separate proline dehydrogenase (PRODH) and Δ(1)-pyrroline-5-carboxylate (P5C) dehydrogenase domains. Here, the kinetic mechanism of PRODH in PutA is studied by ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi201603f

    authors: Moxley MA,Becker DF

    更新日期:2012-01-10 00:00:00

  • Mutagenesis of a proton linkage pathway in Escherichia coli manganese superoxide dismutase.

    abstract::Mutagenesis of Escherichia coli manganese superoxide dismutase (MnSD) demonstrates involvement of the strictly conserved gateway tyrosine (Y34) in exogenous ligand interactions. Conservative replacement of this residue by phenylalanine (Y34F) affects the pH sensitivity of the active-site metal ion and perturbs ligand ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9704212

    authors: Whittaker MM,Whittaker JW

    更新日期:1997-07-22 00:00:00

  • Product dependence of deuterium isotope effects in enzyme-catalyzed reactions.

    abstract::Theory for enzyme-catalyzed reactions is developed for the dependence on product concentration of deuterium isotope effects on V and V/K. Generally, a product that decreases the off-rate for a second product to zero causes the isotope effect on V/K to decrease to DKeq and that on V to decrease to a value between 1 and...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00058a013

    authors: Cook PF,Yoon MY,Hara S,McClure GD Jr

    更新日期:1993-02-23 00:00:00

  • alpha-lytic protease precursor: characterization of a structured folding intermediate.

    abstract::The bacterial alpha-lytic protease (alphaLP) is synthesized as a precursor containing a large N-terminal pro region (Pro) transiently required for correct folding of the protease [Silen, J. L., and Agard, D. A. (1989) Nature 341, 462-464]. Upon folding, the precursor is autocatalyticly cleaved to yield a tight-binding...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi982165e

    authors: Anderson DE,Peters RJ,Wilk B,Agard DA

    更新日期:1999-04-13 00:00:00

  • Calorimetric studies of adenosine 5'-triphosphate hydrolysis by heavy meromyosin.

    abstract::The heat production for the reaction steps of ATP hydrolysis by heavy meromyosin has been reexamined by using a reaction-type calorimeter. So far, the values reported for the heat production have varied substantially among research groups. The present results obtained in 0.3 M KCl, 10 mM MgCl2, and 20 mM Tris-HCl at p...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00518a037

    authors: Yamada T,Shimizu H,Suga H

    更新日期:1981-07-21 00:00:00

  • Raman spectroscopy of synthetic antimicrobial frog peptides magainin 2a and PGLa.

    abstract::Magainin and PGLa are 23- and 21-residue peptides isolated from the skin of the African clawed frog Xenopus laevis. They protect the frog from infection and exhibit a broad-spectrum antimicrobial activity in vitro. The mechanism of this activity involves the interaction of magainin with microbial membranes. We have me...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00470a031

    authors: Williams RW,Starman R,Taylor KM,Gable K,Beeler T,Zasloff M,Covell D

    更新日期:1990-05-08 00:00:00

  • Zinc is associated with the beta subunit of DNA-dependent RNA polymerase of Bacillus subtilis.

    abstract::The Bacillus subtilis DNA-dependent RNA polymerase holoenzyme and core enzyme each contain approximately two atoms of zinc per molecule. When the dissociated subunits of the enzyme are passed through a blue dextran-Sepharose affinity column, only the beta subunit binds to the column. The total zinc content of the enzy...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00632a012

    authors: Halling SM,Sanchez-Anzaldo FJ,Fukuda R,Doi RH,Meares CF

    更新日期:1977-06-28 00:00:00

  • Enzymatic properties of proteolytic derivatives of human alpha-thrombin.

    abstract::The use of derivatives of alpha-thrombin obtained by limited proteolysis, that have only a single peptide bond cleaved, allowed the unequivocal correlation between the change in covalent structure and alteration of the enzymatic properties. beta T-Thrombin contains a single cleavage in the surface loop corresponding t...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00406a049

    authors: Hofsteenge J,Braun PJ,Stone SR

    更新日期:1988-03-22 00:00:00