Path of DNA within the Mu transpososome. Transposase interactions bridging two Mu ends and the enhancer trap five DNA supercoils.

Abstract:

:The phage Mu transpososome is assembled by interactions of transposase subunits with the left (L) and right (R) ends of Mu and an enhancer (E) located in between. A metastable three-site complex LER progresses into a more stable type 0 complex in which a tetrameric transposase is poised for DNA cleavage. "Difference topology" has revealed five trapped negative supercoils within type 0, three contributed by crossings of E with L and R, and two by crossings of L with R. This is the most complex DNA arrangement seen to date within a recombination synapse. Contrary to the prevailing notion, the enhancer appears not to be released immediately following type 0 assembly. Difference topology provides a simple method for determining the ordered sequestration of DNA segments within nucleoprotein assemblies.

journal_name

Cell

journal_title

Cell

authors

Pathania S,Jayaram M,Harshey RM

doi

10.1016/s0092-8674(02)00728-6

subject

Has Abstract

pub_date

2002-05-17 00:00:00

pages

425-36

issue

4

eissn

0092-8674

issn

1097-4172

pii

S0092867402007286

journal_volume

109

pub_type

杂志文章

相关文献

CELL文献大全
  • Extended self-renewal capacity of pluripotent hemopoietic stem cells: association with persistent Friend spleen focus-forming virus.

    abstract::The pluripotential hemopoietic stem cells (CFU-S) of genetically resistant Fv2rr adult C57BL/6 (B6) mice can be persistently infected by Friend virus (FV) when exposed to defective spleen focus-forming virus (SFFV) and helper virus (LLV) at the time of transplantation into heavily irradiated syngeneic recipients (that...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(82)90327-0

    authors: Eckner RJ,Hettrick KL,Greenberger JS,Bennett M

    更新日期:1982-12-01 00:00:00

  • Initiating cellular stress responses.

    abstract::The phosphoinositide 3-kinase related kinases (PIKKs) mediate responses to diverse stresses, including DNA double-strand breaks (DSBs), abnormal replication fork progression, the recognition of premature termination codons in mRNAs, and inadequate nutrient availability. Rigorous control of these kinases limits cellula...

    journal_title:Cell

    pub_type: 杂志文章,评审

    doi:10.1016/j.cell.2004.06.023

    authors: Bakkenist CJ,Kastan MB

    更新日期:2004-07-09 00:00:00

  • Expression cloning and characterization of a novel adipocyte long chain fatty acid transport protein.

    abstract::Long chain fatty acids (LCFAs) are an important energy substrate used by cardiac myocytes and other cells, but the mechanism whereby these molecules cross the plasma membrane is poorly understood. We used an expression cloning strategy and a cDNA library from 3T3-L1 adipocytes to identify a cDNA that, when expressed i...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(94)90252-6

    authors: Schaffer JE,Lodish HF

    更新日期:1994-11-04 00:00:00

  • The evi5 oncogene regulates cyclin accumulation by stabilizing the anaphase-promoting complex inhibitor emi1.

    abstract::The anaphase-promoting complex/cyclosome (APC/C) inhibitor Emi1 controls progression to S phase and mitosis by stabilizing key APC/C ubiquitination substrates, including cyclin A. Examining Emi1 binding proteins, we identified the Evi5 oncogene as a regulator of Emi1 accumulation. Evi5 antagonizes SCF(betaTrCP)-depend...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2005.10.038

    authors: Eldridge AG,Loktev AV,Hansen DV,Verschuren EW,Reimann JD,Jackson PK

    更新日期:2006-01-27 00:00:00

  • Epigenetics drives RAGs to recombination riches.

    abstract::V(D)J recombination of antigen receptor gene segments in B and T cells is mediated by the lymphoid-specific proteins RAG1 and RAG2. Now, Ji et al. (2010) demonstrate how RAG1 and RAG2 use DNA sequence specificity and modified histones within chromatin to target specific loci for V(D)J recombination at different stages...

    journal_title:Cell

    pub_type: 评论,杂志文章

    doi:10.1016/j.cell.2010.04.014

    authors: Schlissel MS

    更新日期:2010-04-30 00:00:00

  • Deletions are associated with somatic rearrangement of immunoglobulin heavy chain genes.

    abstract::The organization of mouse immunoglobulin heavy chain genes has been investigated by hybridization with cloned mu and alpha cDNA probes. Restriction endonuclease fragments bearing mu and alpha constant region genes and two types of variable region (VH) genes were compared in BALB/c embryos, liver and nine plasmacytomas...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(80)90386-4

    authors: Cory S,Adams JM

    更新日期:1980-01-01 00:00:00

  • Structure of the guanine nucleotide exchange factor Sec7 domain of human arno and analysis of the interaction with ARF GTPase.

    abstract::Sec7-related guanine nucleotide exchange factors (GEFs) initiate vesicle budding from the Golgi membrane surface by converting the GTPase ARF to a GTP-bound, membrane-associated form. Here we report the crystal structure of the catalytic Sec7 homology domain of Arno, a human GEF for ARF1, determined at 2.2 angstroms r...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/s0092-8674(00)80933-2

    authors: Mossessova E,Gulbis JM,Goldberg J

    更新日期:1998-02-06 00:00:00

  • Histone deimination antagonizes arginine methylation.

    abstract::Methylation of arginine residues within histone H3 has been linked to active transcription. This modification appears on the estrogen-regulated pS2 promoter when the CARM1 methyltransferase is recruited during transcriptional activation. Here we describe a process, deimination, that converts histone arginine to citrul...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2004.08.020

    authors: Cuthbert GL,Daujat S,Snowden AW,Erdjument-Bromage H,Hagiwara T,Yamada M,Schneider R,Gregory PD,Tempst P,Bannister AJ,Kouzarides T

    更新日期:2004-09-03 00:00:00

  • Glycosylation site binding protein, a component of oligosaccharyl transferase, is highly similar to three other 57 kd luminal proteins of the ER.

    abstract::A 57 kd component of oligosaccharyl transferase, termed glycosylation site binding protein, specifically recognizes a photoaffinity probe containing the N-glycosylation site sequence Asn-Lys-Thr. It is present in the lumen of the ER (endoplasmic reticulum) and its release from this compartment results in a loss of N-g...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(88)90120-1

    authors: Geetha-Habib M,Noiva R,Kaplan HA,Lennarz WJ

    更新日期:1988-09-23 00:00:00

  • Wnt signaling: multivesicular bodies hold GSK3 captive.

    abstract::Two key events in Wnt signal transduction, receptor endocytosis and inactivation of Glycogen Synthase Kinase 3 (GSK3), remain incompletely understood. Taelman et al. (2010) discover that Wnt signaling inactivates GSK3 by sequestering the enzyme in multivesicular bodies, thus linking these two events and providing a ne...

    journal_title:Cell

    pub_type: 评论,杂志文章

    doi:10.1016/j.cell.2010.12.003

    authors: Niehrs C,Acebron SP

    更新日期:2010-12-23 00:00:00

  • Insulin signaling: inositol phosphates get into the Akt.

    abstract::An acute but transient response to insulin is essential for glucose homeostasis in mammals. Chakraborty et al. (2010) uncover a new feedback mechanism regulating insulin signaling. They show that the inositol pyrophosphate IP7, which is produced in response to insulin, inhibits the Akt kinase, a primary effector of in...

    journal_title:Cell

    pub_type: 评论,杂志文章

    doi:10.1016/j.cell.2010.11.040

    authors: Manning BD

    更新日期:2010-12-10 00:00:00

  • Toxoplasma: guess who's coming to dinner.

    abstract::In this issue of Cell, Coppens and coworkers (Coppens et al., 2006) describe how Toxoplasma gondii, an obligate intracellular parasite, feeds on the host. Coppens et al. provide evidence that the parasite takes host cell endosomes and lysosomes hostage by sequestering them where the parasite resides, within invaginati...

    journal_title:Cell

    pub_type: 评论,杂志文章

    doi:10.1016/j.cell.2006.03.029

    authors: Gruenberg J,van der Goot FG

    更新日期:2006-04-21 00:00:00

  • DEX-1 and DYF-7 establish sensory dendrite length by anchoring dendritic tips during cell migration.

    abstract::Cells are devices whose structures delimit function. For example, in the nervous system, neuronal and glial shapes dictate paths of information flow. To understand how cells acquire their shapes, we examined the formation of a sense organ in C. elegans. Using time-lapse imaging, we found that sensory dendrites form by...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2009.01.057

    authors: Heiman MG,Shaham S

    更新日期:2009-04-17 00:00:00

  • A putative Ras GTPase activating protein acts as a negative regulator of signaling by the Sevenless receptor tyrosine kinase.

    abstract::A Drosophila gene with similarity to the mammalian Ras GTPase activating protein has been isolated in screens for mutations that affect eye development. Inactivation of the locus, Gap1, mimics constitutive activation of the Sevenless receptor tyrosine kinase and eliminates the need for a functional Sevenless protein i...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(92)90073-l

    authors: Gaul U,Mardon G,Rubin GM

    更新日期:1992-03-20 00:00:00

  • Dystrophin: the protein product of the Duchenne muscular dystrophy locus.

    abstract::The protein product of the human Duchenne muscular dystrophy locus (DMD) and its mouse homolog (mDMD) have been identified by using polyclonal antibodies directed against fusion proteins containing two distinct regions of the mDMD cDNA. The DMD protein is shown to be approximately 400 kd and to represent approximately...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(87)90579-4

    authors: Hoffman EP,Brown RH Jr,Kunkel LM

    更新日期:1987-12-24 00:00:00

  • Cid13 is a cytoplasmic poly(A) polymerase that regulates ribonucleotide reductase mRNA.

    abstract::Fission yeast Cid13 and budding yeast Trf4/5 are members of a newly identified nucleotidyltransferase family conserved from yeast to man. Trf4/5 are thought to be essential DNA polymerases. We report that Cid13 is a poly(A) polymerase. Unlike conventional poly(A) polymerases, which act in the nucleus and indiscriminat...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/s0092-8674(02)00753-5

    authors: Saitoh S,Chabes A,McDonald WH,Thelander L,Yates JR,Russell P

    更新日期:2002-05-31 00:00:00

  • Apaf1 (CED-4 homolog) regulates programmed cell death in mammalian development.

    abstract::The cytosolic protein APAF1, human homolog of C. elegans CED-4, participates in the CASPASE 9 (CASP9)-dependent activation of CASP3 in the general apoptotic pathway. We have generated by gene trap a null allele of the murine Apaf1. Homozygous mutants die at embryonic day 16.5. Their phenotype includes severe craniofac...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/s0092-8674(00)81732-8

    authors: Cecconi F,Alvarez-Bolado G,Meyer BI,Roth KA,Gruss P

    更新日期:1998-09-18 00:00:00

  • Differential antisense transcription from the Dictyostelium EB4 gene locus: implications on antisense-mediated regulation of mRNA stability.

    abstract::The 2.2 kb mRNA of the Dictyostelium discoideum prespore gene EB4-PSV is constitutively transcribed during growth and development, but the message is only accumulated when cells form aggregates and establish the prespore-prestalk pattern. Disruption of the pattern by mechanical disaggregation results in a rapid loss o...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(92)90130-5

    authors: Hildebrandt M,Nellen W

    更新日期:1992-04-03 00:00:00

  • Bone and Muscle Endocrine Functions: Unexpected Paradigms of Inter-organ Communication.

    abstract::Most physiological functions originate with the communication between organs. Mouse genetics has revived this holistic view of physiology through the identification of inter-organ communications that are unanticipated, functionally important, and would have been difficult to uncover otherwise. This Review highlights t...

    journal_title:Cell

    pub_type: 杂志文章,评审

    doi:10.1016/j.cell.2016.02.043

    authors: Karsenty G,Olson EN

    更新日期:2016-03-10 00:00:00

  • Auxin distribution and plant pattern formation: how many angels can dance on the point of PIN?

    abstract::The plant hormone auxin is central in patterning diverse plant tissues. The direction of auxin flow and the distribution of auxin within tissues are regulated by auxin efflux transporters that are polarly localized in cells. Feedback regulation between auxin and its transporters establishes homeostatic patterns of aux...

    journal_title:Cell

    pub_type: 杂志文章,评审

    doi:10.1016/j.cell.2005.06.005

    authors: Leyser O

    更新日期:2005-06-17 00:00:00

  • Randomization of left-right asymmetry due to loss of nodal cilia generating leftward flow of extraembryonic fluid in mice lacking KIF3B motor protein.

    abstract::Microtubule-dependent motor, murine KIF3B, was disrupted by gene targeting. The null mutants did not survive beyond midgestation, exhibiting growth retardation, pericardial sac ballooning, and neural tube disorganization. Prominently, the left-right asymmetry was randomized in the heart loop and the direction of embry...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/s0092-8674(00)81705-5

    authors: Nonaka S,Tanaka Y,Okada Y,Takeda S,Harada A,Kanai Y,Kido M,Hirokawa N

    更新日期:1998-12-11 00:00:00

  • Patterns of Early p21 Dynamics Determine Proliferation-Senescence Cell Fate after Chemotherapy.

    abstract::Chemotherapy is designed to induce cell death. However, at non-lethal doses, cancer cells can choose to remain proliferative or become senescent. The slow development of senescence makes studying this decision challenging. Here, by analyzing single-cell p21 dynamics before, during, and days after drug treatment, we li...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2019.05.041

    authors: Hsu CH,Altschuler SJ,Wu LF

    更新日期:2019-07-11 00:00:00

  • Separation of endocytic from exocytic coated vesicles using a novel cholinesterase mediated density shift technique.

    abstract::Coated vesicles isolated from rat liver perfused with diisopropylfluorophosphate (DFP) to inactivate endogenous cholinesterase contained newly synthesized secretory cholinesterase after a 30 min recovery. The cholinesterase is found in coated vesicles of presumed endocytic origin following DFP treatment and perfusion ...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(86)90471-x

    authors: Helmy S,Porter-Jordan K,Dawidowicz EA,Pilch P,Schwartz AL,Fine RE

    更新日期:1986-02-14 00:00:00

  • FtsK Is a DNA motor protein that activates chromosome dimer resolution by switching the catalytic state of the XerC and XerD recombinases.

    abstract::FtsK acts at the bacterial division septum to couple chromosome segregation with cell division. We demonstrate that a truncated FtsK derivative, FtsK(50C), uses ATP hydrolysis to translocate along duplex DNA as a multimer in vitro, consistent with FtsK having an in vivo role in pumping DNA through the closing division...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/s0092-8674(02)00624-4

    authors: Aussel L,Barre FX,Aroyo M,Stasiak A,Stasiak AZ,Sherratt D

    更新日期:2002-01-25 00:00:00

  • Mechanosensation of Tight Junctions Depends on ZO-1 Phase Separation and Flow.

    abstract::Cell-cell junctions respond to mechanical forces by changing their organization and function. To gain insight into the mechanochemical basis underlying junction mechanosensitivity, we analyzed tight junction (TJ) formation between the enveloping cell layer (EVL) and the yolk syncytial layer (YSL) in the gastrulating z...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2019.10.006

    authors: Schwayer C,Shamipour S,Pranjic-Ferscha K,Schauer A,Balda M,Tada M,Matter K,Heisenberg CP

    更新日期:2019-10-31 00:00:00

  • Mechanism of transcriptional silencing in yeast.

    abstract::Transcriptional silencing is a phenomenon in which the transcription of a gene by RNA polymerase II or III is repressed or not, dependent only on the gene's chromosomal location. Two prevailing models exist for silencing: (1) steric hindrance in silenced chromatin inhibits the binding of upstream activator proteins or...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2004.11.030

    authors: Chen L,Widom J

    更新日期:2005-01-14 00:00:00

  • Inheritable Silencing of Endogenous Genes by Hit-and-Run Targeted Epigenetic Editing.

    abstract::Gene silencing is instrumental to interrogate gene function and holds promise for therapeutic applications. Here, we repurpose the endogenous retroviruses' silencing machinery of embryonic stem cells to stably silence three highly expressed genes in somatic cells by epigenetics. This was achieved by transiently expres...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2016.09.006

    authors: Amabile A,Migliara A,Capasso P,Biffi M,Cittaro D,Naldini L,Lombardo A

    更新日期:2016-09-22 00:00:00

  • Molecular basis of sulfite oxidase deficiency from the structure of sulfite oxidase.

    abstract::The molybdenum-containing enzyme sulfite oxidase catalyzes the conversion of sulfite to sulfate, the terminal step in the oxidative degradation of cysteine and methionine. Deficiency of this enzyme in humans usually leads to major neurological abnormalities and early death. The crystal structure of chicken liver sulfi...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/s0092-8674(00)80488-2

    authors: Kisker C,Schindelin H,Pacheco A,Wehbi WA,Garrett RM,Rajagopalan KV,Enemark JH,Rees DC

    更新日期:1997-12-26 00:00:00

  • Endophilin mutations block clathrin-mediated endocytosis but not neurotransmitter release.

    abstract::We have identified mutations in Drosophila endophilin to study its function in vivo. Endophilin is required presynaptically at the neuromuscular junction, and absence of Endophilin dramatically impairs endocytosis in vivo. Mutant larvae that lack Endophilin fail to take up FM1-43 dye in synaptic boutons, indicating an...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/s0092-8674(02)00688-8

    authors: Verstreken P,Kjaerulff O,Lloyd TE,Atkinson R,Zhou Y,Meinertzhagen IA,Bellen HJ

    更新日期:2002-04-05 00:00:00

  • Structural basis for cargo regulation of COPII coat assembly.

    abstract::Using cryo-electron microscopy, we have solved the structure of an icosidodecahedral COPII coat involved in cargo export from the endoplasmic reticulum (ER) coassembled from purified cargo adaptor Sec23-24 and Sec13-31 lattice-forming complexes. The coat structure shows a tetrameric assembly of the Sec23-24 adaptor la...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2008.06.024

    authors: Stagg SM,LaPointe P,Razvi A,Gürkan C,Potter CS,Carragher B,Balch WE

    更新日期:2008-08-08 00:00:00