Pathfinder and other tools for analyzing signal transduction networks.

Abstract:

:Many electronic design tools are, at their core, tools for analyzing interacting networks of components in which there is a definite causal sense of direction in each interaction: outputs affect inputs, but not vice versa. Simplifying or restricting a network of protein interactions so that this kind of directedness holds makes the same category of software tools applicable. In signal transduction cascades the direction is usually given by "kinase phosphorylates substrate." This paper examines a few kinds of directed network analysis tools in the context of signal transduction.

journal_name

Ann N Y Acad Sci

authors

Lok L

doi

10.1111/j.1749-6632.2002.tb04534.x

subject

Has Abstract

pub_date

2002-10-01 00:00:00

pages

589-94

eissn

0077-8923

issn

1749-6632

journal_volume

971

pub_type

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