Abstract:
:An equimolar mixture of DL-[alpha-2H]- and DL-[alpha-13C]mandelate, when incubated with mandelate racemase (EC 5.1.2.2), shows conversion of singly labeled mandelate to unlabeled mandelate, due to solvent exchange of the alpha proton, while the level of doubly labeled mandelate remains at a constant low level. Similarly, an equimolar mixture of unlabeled and DL-[alpha-2H,alpha-13C]mandelate, when incubated with the enzyme, shows conversion of doubly labeled mandelate to singly labeled mandelate, due to solvent exchange, while the level of unlabeled mandelate remains constant at 50%. Incubation of an equimolar mixture of DL-[alpha-3H]mandelate and DL-rho-chloromandelate. These results indicate that mandelate racemase does not catalyze an intermolecular proton transfer to achieve racemization. These data are necessary, but not sufficient, results to indicate that mandelate racemase operates via a one-acceptor mechanism, in which the proton abstracted from one stereochemical face of a substrate molecule is returned to the opposite face of the same carbon of the substrate molecule.
journal_name
Biochemistryjournal_title
Biochemistryauthors
Sharp TR,Hegeman GD,Kenyon GLdoi
10.1021/bi00625a015subject
Has Abstractpub_date
1977-03-22 00:00:00pages
1123-8issue
6eissn
0006-2960issn
1520-4995journal_volume
16pub_type
杂志文章相关文献
BIOCHEMISTRY文献大全abstract::Site-directed mutations R177A and R177K in the gene encoding manganese peroxidase isozyme 1 (mnp1) from Phanerochaete chrysosporium were generated. The mutant enzymes were expressed in P. chrysosporium during primary metabolic growth under the control of the glyceraldehyde-3-phosphate dehydrogenase gene promoter, puri...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi990943c
更新日期:1999-08-31 00:00:00
abstract::The beta- and delta-subunits of the nicotinic acetylcholine receptor from Torpedo californica were covalently photolabeled at the synaptic surface with the ATP photoaffinity analogue [alpha-32P]-8-azido-ATP. The specificity of labeling for nucleotide binding sites was demonstrated by the saturation of labeling with in...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00080a002
更新日期:1993-07-27 00:00:00
abstract::Peptide nucleic acids (PNAs) are nonionic DNA/RNA mimics that can recognize complementary sequences by Watson-Crick base pairing. The neutral PNA backbone facilitates the recognition of duplex DNA by strand invasion, suggesting that antigene PNAs (agPNAs) can be important tools for exploring the structure and function...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi700230a
更新日期:2007-06-26 00:00:00
abstract::The conformations of melittin, an amphipathic polypeptide consisting of 26 amino acid residues, and its hydrophobic (residues 1--19) and hydrophilic (residues 20--26) fragments were examined in various solvent systems, including H2O, 2H2O, 2-chloroethanol, and 1,2-dimyristoylphosphatidylcholine (DMPC) multilayers, by ...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00539a006
更新日期:1982-05-11 00:00:00
abstract::DB2277, a heterocyclic diamidine, is a successful design for mixed base pair (bp) DNA sequence recognition. The compound has a central aza-benzimidazole group that forms two H-bonds with a GC bp that has flanking AT bps. The nuclear magnetic resonance structure of the DB2277-DNA complex with an AAGATA recognition site...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/acs.biochem.8b00647
更新日期:2018-08-21 00:00:00
abstract::Proton nuclear magnetic resonance spectra of human hemoglobins in water reveal several exchangeable protons which are indicators of the quaternary structures of both the liganded and unliganded molecules. A comparison of the spectra of normal human adult hemoglobin with those of mutant hemoglobins Chesapeake (FG4alpha...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00682a036
更新日期:1975-06-03 00:00:00
abstract::Eukaryotic assimilatory nitrate reductase (NR) is a dimeric multidomain molybdo-heme-flavo protein that catalyzes the first and rate-limiting step in the nitrate assimilation of plants, algae, and fungi. Nitrate reduction takes place at the N-terminal molybdenum cofactor-containing domain. Reducing equivalents are der...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi1003487
更新日期:2010-09-21 00:00:00
abstract::The calcium-dependent interaction of several annexins with membranes was studied. A novel technique was developed that allowed estimation of calcium binding to aggregating systems. This consisted of immobilized phospholipids on phenyl-Sepharose. Proteins associated with this affinity gel in the presence of radioactive...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00249a009
更新日期:1994-11-15 00:00:00
abstract::The kringle 2 (K2) module of human plasminogen (Pgn) binds L-lysine and analogous zwitterionic compounds, such as the antifibronolytic agent trans-(aminomethyl)cyclohexanecarboxylic acid (AMCHA). Far-UV CD and NMR spectra reveal little conformational change in K2 upon ligand binding. However, retarded (1)H-(2)H isotop...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi9917378
更新日期:1999-11-30 00:00:00
abstract::A versatile diatomic physiological messenger, nitric oxide (NO), is biosynthesized by a group of flavo-heme enzymes, the nitric oxide synthases. We have examined the active site of the neuronal isoform by EPR spectroscopy of the ferrous nitric oxide complex. The nitric oxide complex of the substrate-free enzyme exhibi...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi970823+
更新日期:1997-09-09 00:00:00
abstract::We have studied the structure of the CuB site in the binuclear heme-copper center of the fully oxidized form of the quinol-oxidizing cytochrome aa3-600 from Bacillus subtilis by EXAFS and ENDOR spectroscopy. This enzyme is member of the large superfamily of heme-copper respiratory oxidases, which catalyze the reductio...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00032a019
更新日期:1995-08-15 00:00:00
abstract::Neutral glycosphingolipids and gangliosides in rabbit thymus, spleen, bone marrow, and erythrocyte ghosts were analyzed by conventional chemical and enzymatic procedures and negative ion fast atom bombardment mass spectrometry (FABMS). Thymus gangliosides showed a characteristic composition. Major gangliosides compris...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00352a023
更新日期:1986-02-25 00:00:00
abstract::The coexistence effects of multiple kinds of oxidized deoxyribonucleotides were examined using an SV40 origin-dependent in vitro replication system with a HeLa extract. Oxidized dGTP and dATP, 8-hydroxy-2'-deoxyguanosine 5'-triphosphate (8-OH-dGTP) and 2-hydroxy-2'-deoxyadenosine 5'-triphosphate (2-OH-dATP), were used...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi062117r
更新日期:2007-06-05 00:00:00
abstract::An aminoglycoside 3-acetyltransferase [AAC(3)], possibly a new isoenzymic species of the 3-N-acetyltransferase group, was purified to apparent homogeneity from a crude extract of Pseudomonas aeruginosa, a gentamicin-resistant clinical isolate. The method of purification was consecutive column chromatography--(i) gel f...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00534a009
更新日期:1982-03-02 00:00:00
abstract::Among hormone-inducible transcription factors, estrogen receptors (ERs) play important roles in tissue growth and differentiation, via either direct or indirect binding, in the nucleus, to specific DNA targets called estrogen responsive elements (EREs), or through nongenomic pathways. In humans, two estrogen receptor ...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/acs.biochem.5b00026
更新日期:2015-06-30 00:00:00
abstract::The operator-binding domain of phage lambda repressor provides a model for DNA recognition by the helix-turn-helix (HTH) motif. In the wild-type protein, dimerization is mediated by hydrophobic packing (of the dyad-related helix 5), which serves as an indirect determinant of operator affinity. The mutant repressor, Ty...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00232a003
更新日期:1991-05-07 00:00:00
abstract::The difference spectra of binary and ternary complexes of horse liver alcohol dehydrogenase with oxidized and reduced nicotinamide adenine dinucleotides, nicotinamide 1,N6-ethenoadenine dinucleotide, and adenosine diphosphate ribose along with a number of substrate analogues have been measured. These spectra bear a ve...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00517a022
更新日期:1981-07-07 00:00:00
abstract::The fluorescence self-quenching by energy transfer of FITC-C9, a fluoresceinated derivative of human complement protein C9 [Sims, P.J. (1984) Biochemistry (preceding paper in this issue)], has been used to monitor the kinetics of C9 polymerization induced by the membrane-associated complex of complement proteins C5b-8...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00309a021
更新日期:1984-07-03 00:00:00
abstract::Thioredoxin reductase from Escherichia coli is a member of the pyridine nucleotide-disulfide oxidoreductase family, and contains one FAD and one redox-active disulfide per subunit. It is known that two other well-studied members of this family, lipoamide dehydrogenase and glutathione reductase, cycle between the two e...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi952521i
更新日期:1996-04-16 00:00:00
abstract::Understanding the process of amyloidogenesis is important for the future treatment of misfolding-based diseases, such as Alzheimer's, spongiform encephalopathies, and other important disorders affecting humans. In this work, we have used one of the best-characterized models for folding and misfolding, the activation d...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi900960s
更新日期:2009-11-10 00:00:00
abstract::The active site structures of human Q31 granzyme A, murine granzymes (A, B, C, D, E, and F), and human granzymes (A, B, and 3) isolated from cytotoxic T lymphocytes (CTL) were studied with peptide thioester substrates, peptide chloromethyl ketone, and isocoumarin inhibitors. Human Q31, murine, and human granzyme A hyd...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00222a027
更新日期:1991-02-26 00:00:00
abstract::Previously, we have shown that 4-hydroxynonenal (4-HNE) induces Fas-mediated apoptosis in HLE B-3 cells through a pathway which is independent of FasL, FADD, procaspase 8, and DISC (Li, J., et al. (2006) Biochemistry 45, 12253-12264). The involvement of Daxx has also been suggested in this pathway, but its role is not...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi701559f
更新日期:2008-01-08 00:00:00
abstract::Phosphoenolthiopyruvate, the analogue of phosphoenolpyruvate in which the bridging oxygen of the phosphate ester is replaced by sulfur, has been synthesized from methyl acrylate and dimethyl (chlorothio)phosphonate. The compound is a substrate for alkaline phosphatase, pyruvate kinase, enolase, and phosphoenolpyruvate...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00404a038
更新日期:1988-02-23 00:00:00
abstract::The removal of cylclobutane pyrimidine dimers from cellular DNA occurs preferentially in actively transcribed genes of cells subjected to ultraviolet radiation. In contrast, reports concerning the transcription-dependent repair of N-methylpurines formed in cellular DNA following exposure to methylating agents are quit...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00005a037
更新日期:1995-02-07 00:00:00
abstract::The binding of Ca2+ and the resulting change in catalytic specificity that allows phosphorylation of the calcium ATPase of sarcoplasmic reticulum by ATP were examined by measuring the amount of phosphoenzyme formation from [32P]ATP, or 45Ca incorporation into vesicles, after the simultaneous addition of ATP and EGTA a...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00423a018
更新日期:1988-11-15 00:00:00
abstract::The interaction of Triton X-100 and other nonionic detergents with a delipidated preparation of the Ca2+ ATPase from sarcoplasmic reticulum has been studied. Binding of radiolabeled Triton X-100 was determined by column chromatography at 6 degrees C, and two classes of binding sites were observed. Below the critical m...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00510a006
更新日期:1981-03-31 00:00:00
abstract::The metalloregulatory protein MntR from Bacillus subtilis acts as a transcriptional regulator of manganese homeostasis. MntR is a member of a subfamily of DtxR-related proteins that perform analogous regulatory functions in a variety of pathogenic organisms. Metal ions activate MntR to bind DNA and repress the transcr...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi0350248
更新日期:2003-11-04 00:00:00
abstract::The tRNA(His) guanylyltransferase (Thg1) catalyzes the incorporation of a single guanosine residue at the -1 position (G(-1)) of tRNA(His), using an unusual 3'-5' nucleotidyl transfer reaction. Thg1 and Thg1 orthologs known as Thg1-like proteins (TLPs), which catalyze tRNA repair and editing, are the only known enzyme...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi201397f
更新日期:2012-01-10 00:00:00
abstract::N-RAP is a recently discovered muscle-specific protein that is concentrated at the myotendon junctions in skeletal muscle and at the intercalated disks in cardiac muscle. The C-terminal half of N-RAP contains a region with sequence homology to nebulin, while a LIM domain is found at its N-terminus. N-RAP is hypothesiz...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi982395t
更新日期:1999-05-11 00:00:00
abstract::The mannitol transport protein (EIImtl) carries out translocation with concomitant phosphorylation of mannitol from the periplasm to the cytoplasm, at the expense of phosphoenolpyruvate (PEP). The phosphoryl group which is needed for this group translocation is sequentially transferred from PEP via two phosphorylation...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00221a006
更新日期:1991-02-19 00:00:00