Application of spherical harmonics derived space rotation invariant indices to the analysis of multiple sclerosis lesions' geometry by MRI.

Abstract:

:In the longitudinal study of multiple sclerosis (MS) lesions, varying position of the patient inside the MRI scanner is one of the major sources of assessment errors. We propose to use analytical indices that are invariant to spatial orientation to describe the lesions, rather than focus on patient repositioning or image realignment. Studies were made on simulated lesions systematically rotated, from in vitro MS lesions scanned on different days, and from in vivo MS lesions from a patient that was scanned five times the same day with short intervals of time between scans. Each of the lesions' 3D surfaces was approximated using spherical harmonics, from which indices that are invariant to space rotation were derived. From these indices, an accurate and highly reproducible volume estimate can be derived, which is superior to the common approach of 2D slice stacking. The results indicate that the suggested approach is useful in reducing part of the errors that affect the analysis of changes of MS lesions during follow-up studies. In conclusion, our proposed method circumvents the need for precise patient repositioning and can be advantageous in MRI longitudinal studies of MS patients.

journal_name

Magn Reson Imaging

authors

Goldberg-Zimring D,Achiron A,Warfield SK,Guttmann CR,Azhari H

doi

10.1016/j.mri.2004.01.053

subject

Has Abstract

pub_date

2004-07-01 00:00:00

pages

815-25

issue

6

eissn

0730-725X

issn

1873-5894

pii

S0730725X04000736

journal_volume

22

pub_type

杂志文章
  • Application of fuzzy c-means segmentation technique for tissue differentiation in MR images of a hemorrhagic glioblastoma multiforme.

    abstract::The application of a raw data-based, operator-independent MR segmentation technique to differentiate boundaries of tumor from edema or hemorrhage is demonstrated. A case of a glioblastoma multiforme with gross and histopathologic correlation is presented. The MR image data set was segmented into tissue classes based o...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/0730-725x(94)00093-i

    authors: Phillips WE 2nd,Velthuizen RP,Phuphanich S,Hall LO,Clarke LP,Silbiger ML

    更新日期:1995-01-01 00:00:00

  • Cardiac magnetic resonance tissue tracking in right ventricle: Feasibility and normal values.

    abstract:PURPOSE:To investigate right ventricular (RV) strain in patients without identified cardiac pathology using cardiac magnetic resonance tissue tracking (CMR TT). METHODS:A total of 50 consecutive patients with no identified cardiac pathology were analyzed. RV longitudinal and circumferential strain was assessed by CMR ...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/j.mri.2017.01.007

    authors: Truong VT,Safdar KS,Kalra DK,Gao X,Ambach S,Taylor MD,Moore R,Taylor RJ,Germann J,Toro-Salazar O,Jefferies JL,Bartone C,Raman SV,Ngo T,Mazur W

    更新日期:2017-05-01 00:00:00

  • Balanced multi-image demons for non-rigid registration of magnetic resonance images.

    abstract::A new approach is introduced for non-rigid registration of a pair of magnetic resonance images (MRI). It is a generalization of the demons algorithm with low computational cost, based on local information augmentation (by integrating multiple images) and balanced implementation. Specifically, a single deformation that...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/j.mri.2020.09.013

    authors: Mesin L

    更新日期:2020-12-01 00:00:00

  • Quantitative multi-modal functional MRI with blood oxygenation level dependent exponential decays adjusted for flow attenuated inversion recovery (BOLDED AFFAIR).

    abstract::A magnetic resonance imaging (MRI) method is described that allows interleaved measurements of transverse (R(2)(*) and R(2)) and longitudinal (R(1)) relaxation rates of tissue water in conjunction with spin labeling. The image-contrasts are intrinsically blood oxygenation level dependent (BOLD) and cerebral blood flow...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/s0730-725x(00)00125-9

    authors: Hyder F,Renken R,Kennan RP,Rothman DL

    更新日期:2000-04-01 00:00:00

  • A new diagnostic approach to vascular rings and pulmonary slings: the role of MRI.

    abstract:UNLABELLED:The conventional diagnostic work-up of a patient suspected of having a vascular cause for stridor, or dysphagia, includes esophagography and bronchoscopy to delineate the abnormal structure without imaging the structure itself. Cine-angiography is regarded as the golden standard, but is not routinely perform...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/s0730-725x(97)00245-2

    authors: Beekman RP,Hazekamp MG,Sobotka MA,Meijboom EJ,de Roos A,Staalman CR,Beek FJ,Ottenkamp J

    更新日期:1998-01-01 00:00:00

  • 23Na magnetic resonance imaging: distribution of brine in muscle.

    abstract::Magnetic resonance imaging (MRI) has been used to characterize tissues in morphological studies. Here, 23Na NMR imaging was used to study the distribution in muscle of brine (5 M NaCl), injected before onset of rigor mortis. First, the distribution of brine was monitored in excised muscle from rabbits for 6 hr followi...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/0730-725x(94)92360-4

    authors: Renou JP,Benderbous S,Bielicki G,Foucat L,Donnat JP

    更新日期:1994-01-01 00:00:00

  • 4D MR phase and magnitude segmentations with GPU parallel computing.

    abstract::The increasing size and number of data sets of large four dimensional (three spatial, one temporal) magnetic resonance (MR) cardiac images necessitates efficient segmentation algorithms. Analysis of phase-contrast MR images yields cardiac flow information which can be manipulated to produce accurate segmentations of t...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/j.mri.2014.08.019

    authors: Bergen RV,Lin HY,Alexander ME,Bidinosti CP

    更新日期:2015-01-01 00:00:00

  • Quantitation of normal canine hippocampus formation volume: correlation of MRI with gross histology.

    abstract::The hippocampal formation possesses an important role in the development and maintenance of short-term memory. In this study, magnetic resonance imaging (MRI) and gross histology were used to quantify the volume of the hippocampal formation in canines. High resolution MRI, using 1 mm thick slices and an intraplanar re...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/0730-725x(95)02083-6

    authors: Vullo T,Deo-Narine V,Stallmeyer MJ,Gomez DG,Cahill PT

    更新日期:1996-01-01 00:00:00

  • Susceptibility-matched envelope for the correction of EPI artifacts.

    abstract::Fast gradient echo sequences, such as echo planer imaging (EPI) and spiral imaging, are vulnerable to artifacts resulting from B(0) inhomogeneities. A major contribution to these artifacts is the susceptibility variation across the head, which is most severe in regions adjacent to air-tissue interfaces, such as the mo...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/j.mri.2005.07.011

    authors: Neufeld A,Assaf Y,Graif M,Hendler T,Navon G

    更新日期:2005-11-01 00:00:00

  • Initial clinical evaluation of gadolinium DTPA for contrast-enhanced magnetic resonance imaging.

    abstract::Gadolinium DTPA was evaluated as an intravenous contrast agent for magnetic resonance imaging in 15 patients with primary or secondary intracranial neoplastic disease. T1 and T2 weighted images were obtained prior to contrast administration. T1 weighted spin echo 35/800 (TE/TR) images were utilized to detect enhanceme...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/0730-725x(85)90006-2

    authors: Runge VM,Schoerner W,Niendorf HP,Laniado M,Koehler D,Claussen C,Felix R,James AE Jr

    更新日期:1985-01-01 00:00:00

  • Simultaneous acquisition of multiple orders of intermolecular multiple-quantum coherence images in vivo.

    abstract::Until recently, NMR imaging with intermolecular multiple-quantum coherences (iMQCs) has been based on the acquisition of a single echo. In vivo studies of iMQC image contrast would greatly benefit from a method that could acquire several orders of quantum coherence during the same acquisition. This would enable compar...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/j.mri.2004.10.019

    authors: Shannon KL,Branca RT,Galiana G,Cenzano S,Bouchard LS,Soboyejo W,Warren WS

    更新日期:2004-12-01 00:00:00

  • Measurements of RF heating during 3.0-T MRI of a pig implanted with deep brain stimulator.

    abstract:PURPOSE:To present preliminary, in vivo temperature measurements during MRI of a pig implanted with a deep brain stimulation (DBS) system. MATERIALS AND METHODS:DBS system (Medtronic Inc., Minneapolis, MN) was implanted in the brain of an anesthetized pig. 3.0-T MRI was performed with a T/R head coil using the low-SAR...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/j.mri.2012.11.005

    authors: Gorny KR,Presti MF,Goerss SJ,Hwang SC,Jang DP,Kim I,Min HK,Shu Y,Favazza CP,Lee KH,Bernstein MA

    更新日期:2013-06-01 00:00:00

  • Automated segmentation of lateral ventricles from human and primate magnetic resonance images using cognition network technology.

    abstract::Automatic segmentation of different types of tissue from magnetic resonance images is of great importance for clinical and research applications, particularly large-scale and longitudinal studies of brain pathology. We developed a fully automated algorithm for the segmentation of lateral ventricles from cranial magnet...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/j.mri.2006.08.013

    authors: Schönmeyer R,Prvulovic D,Rotarska-Jagiela A,Haenschel C,Linden DE

    更新日期:2006-12-01 00:00:00

  • Severe anaphylactoid reaction after i.v. Gd-DTPA.

    abstract::Serious adverse reactions following the IV administration of Gd-DTPA (Magnevist, gadopenetate dimeglumine, Berlex Laboratories, Wayne, NJ), although extremely rare, can occur. As yet, there has been no published case of a severe anaphylactoid-type reaction to Gd-DTPA. ...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/0730-725x(90)90019-x

    authors: Weiss KL

    更新日期:1990-01-01 00:00:00

  • Skeletal muscle lymphoma: MRI evaluation.

    abstract::The magnetic resonance imaging (MRI) features of two cases of malignant lymphoproliferative disease involving skeletal muscle are presented. In both cases involved muscles were quantitatively and subjectively hypointense to fat on T1-weighted spin echo images, hypointense or isointense on T2-weighted spin echo images,...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/0730-725x(92)90522-2

    authors: Metzler JP,Fleckenstein JL,Vuitch F,Frenkel EP

    更新日期:1992-01-01 00:00:00

  • Cardiac magnetic resonance imaging in arrhythmogenic right ventricular cardiomyopathy: correlation to the QRS dispersion.

    abstract::The aim of the study was to evaluate the relationship between the presence of right ventricular abnormalities detected by cardiac magnetic resonance (CMR) and QRS dispersion, the strongest independent predictor of sudden death in ARVC. A consecutive series of 40 patients from a single institution were recruited with a...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/j.mri.2012.06.005

    authors: Ma N,Cheng H,Lu M,Jiang S,Yin G,Zhao S

    更新日期:2012-12-01 00:00:00

  • Equivalent cross relaxation rate image for decreasing a false negative case of sentinel lymph node biopsy.

    abstract::In the breast carcinamas, sentinel lymph node biopsy (SLNB) attracts attention as technique to be settled by axillary lymph node metastasis, but existence of a false negative case is a problem. Equivalent cross relaxation rate image (ECRI) is the measurement method that we can evaluate a change of organization structu...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/s0730-725x(03)00208-x

    authors: Matsushima S,Sasaki F,Sarumaru S,Ohta D,Era S,Sogami M,Inaba T,Kinosada Y

    更新日期:2003-11-01 00:00:00

  • Application of magnetic resonance imaging to the measurement of neurodegeneration in rat brain: MRI data correlate strongly with histology and enzymatic analysis.

    abstract::Focal brain ischemia was induced by middle cerebral artery occlusion in the rat. The volume of cerebral damage was determined 2 days later by MRI in vivo and in the same animals histologically. The edema volume as measured by MRI and the histologically determined infarction was highly correlated. As a consequence, the...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/0730-725x(92)90411-r

    authors: Allegrini PR,Sauer D

    更新日期:1992-01-01 00:00:00

  • Real-time animal functional magnetic resonance imaging and its application to neuropharmacological studies.

    abstract::In pharmacological magnetic resonance imaging (phMRI) with anesthetized animals, there is usually only a single time window to observe the dynamic signal change to an acute drug administration since subsequent drug injections are likely to result in altered response properties (e.g., tolerance). Unlike the block-desig...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/j.mri.2008.02.020

    authors: Lu H,Yang S,Zuo Y,Demny S,Stein EA,Yang Y

    更新日期:2008-11-01 00:00:00

  • Cortical morphologic changes in recent-onset, drug-naïve idiopathic generalized epilepsy.

    abstract:PURPOSE:Only a few studies have investigated the brain morphology abnormalities in structural MRI in patients with drug-naïve idiopathic generalized epilepsy (IGE) and mainly focused on brain volume changes. In the present study, we aimed to investigate the changes in three morphologic measurement differences including...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/j.mri.2019.05.035

    authors: Deng DM,Chen LZ,Li YW,Long R,Tang GC,Han FG,Diao XM,Chen HL,Long ZL,Qiu LH

    更新日期:2019-09-01 00:00:00

  • NMR imaging, NMR diffraction and applications of pulsed gradient spin echoes in porous media.

    abstract::Diffraction ideas were first introduced to NMR by Mansfield and Grannell. Here we compare "Mansfield (k-space) diffraction" with the "diffusive (q-space) diffraction," noting their similarities and differences. The diffusive-diffraction concept is extremely helpful in elucidating the Pulsed Gradient Spin Echo NMR expe...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/s0730-725x(96)00152-x

    authors: Callaghan PT

    更新日期:1996-01-01 00:00:00

  • Echo-shifted multislice EPI for high-speed fMRI.

    abstract::The advantages of event-related functional Magnetic Resonance Imaging (fMRI) and the increasing use of fMRI in cognitive experiments are both driving the development of techniques that allow images sensitive to the blood oxygen level-dependent effect to be acquired at ever-higher temporal resolution. Here, we present ...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/j.mri.2005.12.030

    authors: Gibson A,Peters AM,Bowtell R

    更新日期:2006-05-01 00:00:00

  • Magnetic resonance imaging appearance of metastatic Merkel cell carcinoma to the sacrum and epidural space.

    abstract::Merkel cell carcinoma (MCC) is a rare malignant tumor of the skin and often is diagnosed histologically as lymphoma, melanoma and even metastatic small cell carcinoma of the lung (SCCL). Classified as a neuroendocrine tumor, clinically it originates in the head and neck region and may present with metastatic disease a...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/s0730-725x(00)00176-4

    authors: Moayed S,Maldjianb C,Adam R,Bonakdarpour A

    更新日期:2000-10-01 00:00:00

  • Primary epiploic appendagitis: MRI findings.

    abstract::Primary epiploic appendagitis (PEA) occurs secondary to inflammation of an epiploic appendage, and is considered to be a rare cause of acute abdomen. In this case report, we describe the magnetic resonance imaging (MRI) findings of PEA correlated with computed tomographic (CT) findings. MRI findings included an oval s...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/s0730-725x(02)00478-2

    authors: Sirvanci M,Balci NC,Karaman K,Duran C,Karakaş E

    更新日期:2002-01-01 00:00:00

  • Influence of baseline hematocrit on between-subject BOLD signal change using gradient echo and asymmetric spin echo EPI.

    abstract::The dependence of BOLD signal change (BSC) on baseline hematocrit is in the process of being characterized, primarily using conventional Gradient Echo (GE) echo planar imaging (EPI). We describe the first empiric exploration of this relationship using, in addition to GE, Spin Echo (SE) and two Asymmetric Spin Echo EPI...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/s0730-725x(03)00083-3

    authors: Gustard S,Williams EJ,Hall LD,Pickard JD,Carpenter TA

    更新日期:2003-07-01 00:00:00

  • Mri measurements of T1, T2 and D for gels undergoing volume phase transition.

    abstract::Gels consist of crosslinked polymer network swollen in solvent. The network of flexible long-chain molecules traps the liquid medium they are immersed in. Some gels undergo abrupt volume change, a phase transition process, by swelling-shrinking in response to external stimuli changes in solvent composition, temperatur...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/s0730-725x(02)00639-2

    authors: Yung KT

    更新日期:2003-02-01 00:00:00

  • Off-resonance correction using an estimated linear time map.

    abstract::Images acquired in the presence of magnetic field deviations and reconstructed without taking into account the off-resonance, are distorted and corrupted with artifacts. Several post-processing algorithms have been developed for correcting the distortion when it is not possible to fix the field inhomogeneities. These ...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/s0730-725x(02)00487-3

    authors: Akel JA,Rosenblitt M,Irarrazaval P

    更新日期:2002-02-01 00:00:00

  • MRI-assisted radiation therapy planning of brain tumors--clinical experiences in 17 patients.

    abstract::A new and simple method for precise determination of lateral opposed treatment portals was developed and used in 17 patients. Compared to CT, MRI led to significant changes of portals in 59% (10/17) of cases. Individual shielding blocks could be precisely designed by use of our new method. MRI is the procedure of choi...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/0730-725x(91)90007-9

    authors: Just M,Rösler HP,Higer HP,Kutzner J,Thelen M

    更新日期:1991-01-01 00:00:00

  • The diagnosis of hippocampal sclerosis: other techniques.

    abstract::Pathologically, hippocampal sclerosis (HS) is characterized by neuronal loss and gliosis affecting particularly the pyramidal neurons of CA1, CA3, and CA4 with relative sparing of the CA2 neurons. This can be identified in vivo with magnetic resonance (MR) imaging techniques that can reveal both morphological and sign...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章,评审

    doi:10.1016/0730-725x(95)02016-m

    authors: Jackson GD

    更新日期:1995-01-01 00:00:00

  • Acute effects of exercise on muscle MRI in peripheral arterial occlusive disease.

    abstract::The midcalf muscles of eight patients who had peripheral arterial occlusive disease were evaluated by exercise MRI before and after bypass surgery or percutaneous transluminal angioplasty. MRI showed a high intensity of these muscles, especially the posterior muscles, after exercise in all patients before intervention...

    journal_title:Magnetic resonance imaging

    pub_type: 杂志文章

    doi:10.1016/0730-725x(95)00018-c

    authors: Yoshioka H,Anno I,Kuramoto K,Matsumoto K,Jikuya T,Itai Y

    更新日期:1995-01-01 00:00:00