Quantitation of dopaminergic neurons in 3-dimensional reaggregate tissue culture by computer-assisted image analysis.

Abstract:

:Three-dimensional (3D) reaggregate tissue culture provides a means of quantitatively assessing neuronal cell survival under a variety of experimental conditions. A method is presented for estimation of, and comparison between, the total numbers of cells of a given neurochemical type within individual experimental flasks. The method involves cell counting from random reaggregate sections, determination of sectional volumes, and of 3D reaggregate volumes by a novel image-analysis computer system.

journal_name

J Neurosci Methods

authors

Vidal L,Heller B,Won L,Heller A

doi

10.1016/0165-0270(94)00110-3

subject

Has Abstract

pub_date

1995-01-01 00:00:00

pages

89-98

issue

1

eissn

0165-0270

issn

1872-678X

pii

0165027094001103

journal_volume

56

pub_type

杂志文章
  • Proximal branching patterns of middle cerebral artery (MCA) in rats and their influence on the infarct size produced by MCA occlusion.

    abstract::The branching patterns of the proximal middle cerebral artery (MCA) and their influence on the infarct size following MCA occlusion in rats were studied. In the proximal part from the level of the olfactory tract, the MCA most often presented one surface branch extending anteriorly, with a variable number of surface b...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(95)00058-5

    authors: Niiro M,Simon RP,Kadota K,Asakura T

    更新日期:1996-01-01 00:00:00

  • A low-cost, portable, micro-controlled device for multi-channel LED visual stimulation.

    abstract::Light emitting diodes (LEDs) are extensively used as light sources to investigate visual and visually related function and dysfunction. Here, we describe the design of a compact, low-cost, stand-alone LED-based system that enables the configuration, storage and presentation of elaborate visual stimulation paradigms. T...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2011.02.004

    authors: Pinto MA,de Souza JK,Baron J,Tierra-Criollo CJ

    更新日期:2011-04-15 00:00:00

  • Quantification of antioxidant activity in brain tissue homogenates using the 'total equivalent antioxidant capacity'.

    abstract::We demonstrate herein that the standard 'Trolox equivalent antioxidant capacity' (TEAC) assay, typically utilized to quantify total antioxidant levels within plasma, can also be utilized for tissue homogenates. Normal mice and transgenic mice lacking apolipoprotein E were subjected to a diet including iron as a generi...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/s0165-0270(03)00028-1

    authors: Shea TB,Rogers E,Ashline D,Ortiz D,Sheu MS

    更新日期:2003-05-30 00:00:00

  • A new method for the rapid and long term growth of human neural precursor cells.

    abstract::A reliable source of human neural tissue would be of immense practical value to both neuroscientists and clinical neural transplantation trials. In this study, human precursor cells were isolated from the developing human cortex and, in the presence of both epidermal and fibroblast growth factor-2, grew in culture as ...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/s0165-0270(98)00126-5

    authors: Svendsen CN,ter Borg MG,Armstrong RJ,Rosser AE,Chandran S,Ostenfeld T,Caldwell MA

    更新日期:1998-12-01 00:00:00

  • A simple electronic unit allowing extracellular recording and stimulation through the same wire hook or suction electrode.

    abstract::A simple and easily constructed unit was designed using a buffer amplifier, a programmable transconductance amplifier and an active filter. The unit allows extracellular recording and stimulation through the same electrode. Thus in experiments where it is required to stimulate a nerve and record the effects of the sti...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(84)90034-7

    authors: Hatzopoulos A,Theophilidis G

    更新日期:1984-08-01 00:00:00

  • Evaluation of hearing and auditory nerve function by combining ABR, DPOAE and eABR tests into a single recording session.

    abstract::In this article, we describe an efficient method for testing both auditory receptor and auditory nerve function in a single recording session. Auditory receptor function is tested in response to pure tone, tone burst and click acoustic stimuli (i.e. distortion products of otoacoustic emissions, DPOAE; and auditory-evo...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2003.11.003

    authors: Polak M,Eshraghi AA,Nehme O,Ahsan S,Guzman J,Delgado RE,He J,Telischi FF,Balkany TJ,Van De Water TR

    更新日期:2004-04-30 00:00:00

  • The multiscale entropy: Guidelines for use and interpretation in brain signal analysis.

    abstract:BACKGROUND:Multiscale entropy (MSE) estimates the predictability of a signal over multiple temporal scales. It has been recently applied to study brain signal variability, notably during aging. The grounds of its application and interpretation remain unclear and subject to debate. METHOD:We used both simulated and exp...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2016.09.004

    authors: Courtiol J,Perdikis D,Petkoski S,Müller V,Huys R,Sleimen-Malkoun R,Jirsa VK

    更新日期:2016-11-01 00:00:00

  • A framework for analyzing the relationship between gene expression and morphological, topological, and dynamical patterns in neuronal networks.

    abstract:BACKGROUND:A key point in developmental biology is to understand how gene expression influences the morphological and dynamical patterns that are observed in living beings. NEW METHOD:In this work we propose a methodology capable of addressing this problem that is based on estimating the mutual information and Pearson...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2015.02.019

    authors: de Arruda HF,Comin CH,Miazaki M,Viana MP,Costa Lda F

    更新日期:2015-04-30 00:00:00

  • An optimized method for enumerating CNS derived memory B cells during viral-induced inflammation.

    abstract:BACKGROUND:CNS inflammation resulting from infection, injury, or neurodegeneration leads to accumulation of diverse B cell subsets. Although antibody secreting cells (ASC) within the inflamed CNS have been extensively examined, memory B cell (Bmem) characterization has been limited as they do not secrete antibody witho...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2017.05.011

    authors: DiSano KD,Stohlman SA,Bergmann CC

    更新日期:2017-06-15 00:00:00

  • Selective MCA occlusion: a precise embolic stroke model.

    abstract::The present study describes a method for improving the precision and accuracy of clot placement within the middle cerebral artery (MCA) of rats, utilizing a micro-catheter and laser Doppler flowmetry. This technique reduces the size of clot needed to achieve stable occlusion with no failed embolizations and a low perc...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2005.12.026

    authors: Dinapoli VA,Rosen CL,Nagamine T,Crocco T

    更新日期:2006-06-30 00:00:00

  • Magnetic resonance angiography of carotid and cerebral arterial occlusion in rats using a clinical scanner.

    abstract::In rat models to induce both focal cerebral ischemia and chronic cerebral hypoperfusion, it is highly desirable to verify the success of vessel occlusion and reopening with non-invasive method. The contrast-agent free 3D time-of-flight magnetic resonance angiography (TOF-MRA), diffusion-weighted imaging (DWI) and T2-w...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2007.08.005

    authors: Yang YM,Feng X,Yao ZW,Tang WJ,Liu HQ,Zhang L

    更新日期:2008-01-30 00:00:00

  • CSF-1 receptor inhibition as a highly effective tool for depletion of microglia in mixed glial cultures.

    abstract:BACKGROUND:A breakthrough in the microglia and macrophages field was the identification of the macrophage colony stimulating factor-1 (CSF-1) as a pro-survival factor. Its pharmacological inhibition in animals depletes rapidly all microglia and macrophages. Microglial depletion in mixed glial cultures has always repres...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2019.108537

    authors: Hupp S,Iliev AI

    更新日期:2020-02-15 00:00:00

  • Investigation of rat exploratory behavior via evolving artificial neural networks.

    abstract:BACKGROUND:Neuroevolution comprises the use of evolutionary computation to define the architecture and/or to train artificial neural networks (ANNs). This strategy has been employed to investigate the behavior of rats in the elevated plus-maze, which is a widely used tool for studying anxiety in mice and rats. NEW MET...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2016.06.010

    authors: Costa AA,Tinós R

    更新日期:2016-09-01 00:00:00

  • Volumetric imaging of brain activity with spatial-frequency decoding of neuromagnetic signals.

    abstract:BACKGROUND:The brain generates signals in a wide frequency range (∼2840 Hz). Existing magnetoencephalography (MEG) methods typically detect brain activity in a median-frequency range (1-70 Hz). The objective of the present study was to develop a new method to utilize the frequency signatures for source imaging. NEW ME...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2014.10.007

    authors: Xiang J,Korman A,Samarasinghe KM,Wang X,Zhang F,Qiao H,Sun B,Wang F,Fan HH,Thompson EA

    更新日期:2015-01-15 00:00:00

  • Automated and quantitative image analysis of ischemic dendritic blebbing using in vivo 2-photon microscopy data.

    abstract::Ischemia induces a 'blebbing' of dendrites, a structural alteration where dendrites take on a 'beads on a string' appearance. We developed a toolkit program, BlebQuant, for quantitative automated bleb analysis to chart the morphology of dendrites labeled with GFP/YFP under normal conditions and after ischemia-induced ...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2010.12.018

    authors: Chen S,Tran S,Sigler A,Murphy TH

    更新日期:2011-02-15 00:00:00

  • Maze model to study spatial learning and memory in freely moving monkeys.

    abstract::Many types of mazes have been used in cognitive brain research and data obtained from those experiments, especially those from rodents' studies, support the idea that the hippocampus is related to spatial learning and memory. But the results from non-human primates researches regarding the role of the hippocampus in s...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2007.12.017

    authors: Zhang B,Tan H,Sun NL,Wang JH,Meng ZQ,Li CY,Fraser WA,Hu XT,Carlson S,Ma YY

    更新日期:2008-05-15 00:00:00

  • Noninvasive in vivo assessment of muscle impairment in the mdx mouse model--a comparison of two common wire hanging methods with two different results.

    abstract::Duchenne muscular dystrophy (DMD) is an X-chromosome-linked disorder that arises from a mutation in the gene for the cytoskeletal protein dystrophin, normally expressed in the myofibres. The most widely applied animal model in DMD basic research is the C57BL/10ScSn-mdx/J mouse, commonly referred to as the "mdx mouse"....

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2011.10.001

    authors: Klein SM,Vykoukal J,Lechler P,Zeitler K,Gehmert S,Schreml S,Alt E,Bogdahn U,Prantl L

    更新日期:2012-01-30 00:00:00

  • Membrane ultrastructure preservation and membrane potentials after isolation of rabbit retinal glial (Müller) cells by papain.

    abstract::Enzymatically isolated retinal glial (Müller) cells have been the subject of many electrophysiological studies. Local high membrane conductivities for potassium ions have been speculated to correspond with local occurrence of orthogonal arrays of intramembranous particles (OAP) observed in freeze-fracture replicas of ...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(90)90145-6

    authors: Reichenbach A,Wolburg H,Richter W,Eberhardt W

    更新日期:1990-06-01 00:00:00

  • A retrograde double-labeling technique for light microscopy. A combination of axonal transport of cholera toxin B-subunit and a gold-lectin conjugate.

    abstract::A light microscopical, non-fluorescent, retrograde double-labeling technique is described. Cholera toxin B-subunit (CTb) and a conjugate of wheatgerm agglutinin and bovine serum albumin coupled to 10 nm gold particles (gold-lectin) are both excellent retrograde tracers and, when visualized by means of immunohistochemi...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(94)00034-e

    authors: Ruigrok TJ,Teune TM,van der Burg J,Sabel-Goedknegt H

    更新日期:1995-09-01 00:00:00

  • Threshold depolarization measurements in resting human motoneurones.

    abstract::Threshold depolarization is defined as the amplitude of the depolarization that will just bring a neurone to its firing threshold. Here, a novel technique is described for the measurement of threshold depolarization in resting human motoneurones. The tibial nerve was stimulated at an intensity that was just sufficient...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(91)90097-j

    authors: Türker KS,Miles TS

    更新日期:1991-08-01 00:00:00

  • Long-term recordings and receptive field measurements from single units of the visual cortex of awake unrestrained kittens.

    abstract::A method is described which allows simultaneous recording of the activity of several neurons in the visual cortex of awake unrestrained kittens for a period sufficiently long to follow experience-dependent changes in receptive field properties. The electrodes consisted of 25 microns thick Teflon-coated platinum-iridiu...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(88)90131-8

    authors: Mioche L,Singer W

    更新日期:1988-11-01 00:00:00

  • A novel rat model of cerebral artery occlusion complicated with prior venous stagnation.

    abstract:BACKGROUND:To establish a novel rat model of middle cerebral artery occlusion (MCAO) complicated with prior venous stagnation, and to investigate the role of cerebral venous drainage in neural injury after acute cerebral infarction. NEW METHOD:Eighteen SD rats were randomly divided into two groups: control group and j...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2019.01.016

    authors: Zhang NN,Zhao KT,Zhao ZA,Chen WL,Xu HB,Chen HS

    更新日期:2019-04-15 00:00:00

  • Intravenous recording of intracranial, broadband EEG.

    abstract::The most direct evaluation of human brain activity has been obtained from intracranial electrodes placed either on the surface of the brain or inserted into the brain to record from deep brain structures. Currently, the placement of intracranial electrodes implies transcranial surgery, either through a burr hole or a ...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2012.12.027

    authors: Bower MR,Stead M,Van Gompel JJ,Bower RS,Sulc V,Asirvatham SJ,Worrell GA

    更新日期:2013-03-30 00:00:00

  • Component analysis of the responses of sensory neurons to combined sinusoidal and triangular stimulation.

    abstract::A method for quantitative estimation of sensory neuron sensitivity to small sinusoidal stimuli in the presence of sizable background drift (in the stimulus or response) was developed. The performance of the method was tested by analyzing the responses of 17 muscle spindle primary (Ia) afferent neurons to concomitant s...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(94)90175-9

    authors: Hulliger M,Baumann TK

    更新日期:1994-08-01 00:00:00

  • Detection of cerebral arterial gas embolism using regional cerebral oxygen saturation, quantitative electroencephalography, and brain oxygen tension in the swine.

    abstract:BACKGROUND:Cerebral air emboli occur as a complication of invasive medical procedures. The sensitivity of cerebral monitoring methods for the detection of air emboli is not known. This study investigates the utility of electroencephalography and non-invasively measured cerebral oxygen saturation in the detection of int...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2014.03.009

    authors: Weenink RP,Hollmann MW,Stevens MF,Kager J,van Gulik TM,van Hulst RA

    更新日期:2014-05-15 00:00:00

  • Unbiased and robust quantification of synchronization between spikes and local field potential.

    abstract:BACKGROUND:In neuroscience, relating the spiking activity of individual neurons to the local field potential (LFP) of neural ensembles is an increasingly useful approach for studying rhythmic neuronal synchronization. Many methods have been proposed to measure the strength of the association between spikes and rhythms ...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2016.05.004

    authors: Li Z,Cui D,Li X

    更新日期:2016-08-30 00:00:00

  • A combined recording and microiontophoresis technique for input-output analysis of single neurons in the mammalian CNS.

    abstract::A method is described for producing electrolytically sharpened and lacquer-insulated steel microelectrodes and for their attachment to a multibarrel micropipet assembly by light-curing bonding compound. This electrode complex is specially designed for recordings from deep brain structures. It permits the analysis of t...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(88)90007-6

    authors: Gottschaldt KM,Hicks TP,Vahle-Hinz C

    更新日期:1988-04-01 00:00:00

  • A microfluidic chip for axonal isolation and electrophysiological measurements.

    abstract::A microfluidic chip for culturing neurons and spatially isolating axons from somas is presented for use with visually guided whole-cell electrophysiological measurements. A modular design consisting of detachable and re-sealable layers is used to satisfy the requirements of both long-term neuron culturing as well as e...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2012.10.013

    authors: Jokinen V,Sakha P,Suvanto P,Rivera C,Franssila S,Lauri SE,Huttunen HJ

    更新日期:2013-01-30 00:00:00

  • Use of fNIRS to assess resting state functional connectivity.

    abstract::Recently, resting state functional connectivity (RSFC) studies based on fMRI and EEG/MEG have provided valuable insight into the intrinsic functional architecture of the human brain. However, whether functional near infrared spectroscopy (fNIRS), a suitable imaging method for infant and patient populations, can be use...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2009.11.010

    authors: Lu CM,Zhang YJ,Biswal BB,Zang YF,Peng DL,Zhu CZ

    更新日期:2010-02-15 00:00:00

  • Slowly conducting potentials in human sensory nerves.

    abstract:BACKGROUND:In clinical practice, small myelinated sensory fibers, Aδ-fibers, conveying mainly pain and temperature sensations, cannot be examined with available nerve conduction study techniques. Currently, these fibers can only be examined with experimental or very specialized and not commonly available nerve conducti...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2020.109045

    authors: Raabe W,Walk D

    更新日期:2020-12-24 00:00:00