Fluorescent properties of pyrene bound at specific acylation sites of chicken liver fatty acid synthase.

Abstract:

:The covalent modification of chicken liver fatty acid synthase by 4-(1-pyrenyl)butyryl-CoA (PBA-CoA), a fluorescent analogue of acetyl- and malonyl-CoA, has been studied. The binding isotherms and the kinetics of inactivation suggest 2 mol of PBA-CoA/mol of enzyme is specifically incorporated into the enzyme. Two classes of binding sites have been identified by determining the fluorescence lifetimes of enzyme-bound pyrene, by the quenching of enzyme-bound pyrene fluorescence with iodide, and by neutral hydroxaminolysis of both the native and denatured PBA-CoA-modified enzymes. Hydroxaminolysis of the denatured enzyme indicates that 4-(1-pyrenyl)butyric acid is esterified to both hydroxyl and thiol groups. The portion esterified to the hydroxyl is readily removed from the native enzyme by treatment with neutral hydroxylamine, indicating that the oxygen ester is unstable to hydroxylamine in the native enzyme. Iodide and acrylamide quenching of the enzyme-bound pyrene fluorescence shows that solvent access to both classes of pyrene binding sites is restricted. Iodide preferentially quenches one class of sites in the native enzyme, but these sites are not differentiated in the monomeric or denatured enzyme. The steady-state anisotropy, 0.083, indicates the enzyme-bound pyrene has considerable rotational freedom. The dynamic anisotropy can be characterized solely by a viscosity-dependent rotational correlation time of 610 ns, which is ascribed to the rotational motion of the dimeric enzyme.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Anderson VE,Hammes GG

doi

10.1021/bi00281a032

subject

Has Abstract

pub_date

1983-06-07 00:00:00

pages

2995-3001

issue

12

eissn

0006-2960

issn

1520-4995

journal_volume

22

pub_type

杂志文章
  • Stereochemistry of phospho group transfer catalyzed by a mutant alkaline phosphatase.

    abstract::The stereochemical course of the phospho group transfer catalyzed by mutant (S102C) alkaline phosphatase from Escherichia coli was investigated by using 31P nuclear magnetic resonance spectroscopy. Transphosphorylation from 4-nitrophenyl (Rp)-[16O, 17O, 18O]phosphate to (S)-propane-1,2-diol occurs with overall retenti...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00413a029

    authors: Butler-Ransohoff JE,Kendall DA,Freeman S,Knowles JR,Kaiser ET

    更新日期:1988-06-28 00:00:00

  • Probing the heme iron coordination structure of alkaline chloroperoxidase.

    abstract::The mechanism by which the heme-containing peroxidase, chloroperoxidase, is able to chlorinate substrates is poorly understood. One approach to advance our understanding of the mechanism of the enzyme is to determine those factors which contribute to its stability. In particular, under alkaline conditions, chloroperox...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi961512m

    authors: Blanke SR,Martinis SA,Sligar SG,Hager LP,Rux JJ,Dawson JH

    更新日期:1996-11-19 00:00:00

  • Effects of the Iowa and Milano mutations on apolipoprotein A-I structure and dynamics determined by hydrogen exchange and mass spectrometry.

    abstract::The Iowa point mutation in apolipoprotein A-I (G26R) leads to a systemic amyloidosis condition, and the Milano mutation (R173C) is associated with hypoalphalipoproteinemia, a reduced plasma level of high-density lipoprotein. To probe the structural effects that lead to these outcomes, we used amide hydrogen-deuterium ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi300926j

    authors: Chetty PS,Ohshiro M,Saito H,Dhanasekaran P,Lund-Katz S,Mayne L,Englander W,Phillips MC

    更新日期:2012-11-06 00:00:00

  • A conformational rearrangement in gramicidin A: from a double-stranded left-handed to a single-stranded right-handed helix.

    abstract::A conformational transition is described for the polypeptide, gramicidin A, in which a dimer that forms a left-handed intertwined antiparallel helix is converted to a single-stranded amino terminus to amino terminus right-handed helix. The starting structure is determined here by solution NMR methods while reference i...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00152a019

    authors: Zhang Z,Pascal SM,Cross TA

    更新日期:1992-09-22 00:00:00

  • Phenotypically selected mutations in myosin's actin binding domain demonstrate intermolecular contacts important for motor function.

    abstract::Here, we biochemically characterize Dictyostelium myosin II mutants that were previously phenotypically selected following random mutagenesis and shown to lie in the actin binding domain [Patterson, B., & Spudich, J. A. (1996) Genetics 143, 801-810]. We show that the conditional loss of myosin-dependent activity in vi...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi963141f

    authors: Giese KC,Spudich JA

    更新日期:1997-07-15 00:00:00

  • Cyclopropane fatty acid synthase of Escherichia coli: deduced amino acid sequence, purification, and studies of the enzyme active site.

    abstract::Cyclopropane fatty acid (CFA) synthase of Escherichia coli catalyzes a modification of the acyl chains of phospholipid bilayers. We report (i) identification of the CFA synthase protein, (ii) overproduction (> 600-fold) and purification to essential homogeneity of the enzyme, and (iii) the amino acid sequence of CFA s...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00160a011

    authors: Wang AY,Grogan DW,Cronan JE Jr

    更新日期:1992-11-17 00:00:00

  • A novel method for determining rate constants for dehydration of aldehyde hydrates.

    abstract::A method has been developed for calculating rate constants for dehydration of aldehydes that induce ATPase reactions by kinases and where 18O is transferred from the aldehyde or its hydrate to inorganic phosphate during the reaction. The method involves measurement of the fraction of 18O in phosphate by 31P NMR after ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00317a011

    authors: Rendina AR,Hermes JD,Cleland WW

    更新日期:1984-10-23 00:00:00

  • Temperature dependence of the reduction potential of CuA in carbon monoxide inhibited cytochrome c oxidase.

    abstract::The temperature dependence of the reduction potential of the CuA site in carbon monoxide inhibited cytochrome c oxidase has been measured with a spectroelectrochemical method adapted to the relatively weak near-infrared absorption of this copper ion. These measurements, together with parallel measurements on the 604-n...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00349a024

    authors: Wang H,Blair DF,Ellis WR Jr,Gray HB,Chan SI

    更新日期:1986-01-14 00:00:00

  • Biochemical and functional characterization of recombinant Rhodnius prolixus platelet aggregation inhibitor 1 as a novel lipocalin with high affinity for adenosine diphosphate and other adenine nucleotides.

    abstract::The Rhodnius prolixus aggregation inhibitor 1 (RPAI-1) is a novel blood-sucking salivary molecule that binds to ADP and attenuates platelet aggregation. In this report, we determine the binding constants and specificity of RPAI-1 for adenine nucleotides and its functional significance. By the Hummel-Dreyer method of e...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi011015s

    authors: Francischetti IM,Andersen JF,Ribeiro JM

    更新日期:2002-03-19 00:00:00

  • Self-assembly of designed antimicrobial peptides in solution and micelles.

    abstract::Hydrophobic interactions are responsible for stabilizing leucine zippers in peptides containing heptad repeats. The effects of substituting leucine by phenylalanine and alanine by glycine on the self-assembly of coiled-coils were examined in minimalist antimicrobial peptides designed to form amphipathic alpha-helices....

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi961644f

    authors: Javadpour MM,Barkley MD

    更新日期:1997-08-05 00:00:00

  • Communication between the active sites in dimeric mercuric ion reductase: an alternating sites hypothesis for catalysis.

    abstract::Mercuric reductase, a flavoprotein disulfide oxidoreductase, catalyzes the two-electron reduction of Hg(II) to Hg(0) by NADPH. As with all the members of this class of proteins, the enzyme is a dimer of identical subunits with two active sites per dimer, each composed of one FAD and catalytically essential residues fr...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00224a006

    authors: Miller SM,Massey V,Williams CH Jr,Ballou DP,Walsh CT

    更新日期:1991-03-12 00:00:00

  • The structural basis for pseudoreversion of the E165D lesion by the secondary S96P mutation in triosephosphate isomerase depends on the positions of active site water molecules.

    abstract::The structural basis for the improvement in catalytic efficiency of the mutant E165D chicken triosephosphate isomerase by the secondary mutation, S96P, has been analyzed using a combination of X-ray crystallography and Fourier transform infrared spectroscopy. All X-ray structures were of the complex of phosphoglycoloh...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00041a041

    authors: Komives EA,Lougheed JC,Liu K,Sugio S,Zhang Z,Petsko GA,Ringe D

    更新日期:1995-10-17 00:00:00

  • Bovine dentin phosphophoryn: composition and molecular weight.

    abstract::The molecular weight of phosphophoryn, an acidic phosphoprotein unique to dentin matrix, has been difficult to determine because of a combination of neutral protease activities in this tissue and the intrinsic high charge density of the molecule. In this study, bovine dentin phosphophoryn (BDPP) was isolated by a proc...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00287a025

    authors: Stetler-Stevenson WG,Veis A

    更新日期:1983-08-30 00:00:00

  • Comparison of the energetics of the uncatalyzed and glutamate dehydrogenase catalyzed alpha-imino acid-alpha-amino acid interconversion.

    abstract::The thermodynamic and activation parameters for the reduction of delta 1-pyrroline-2-carboxylic acid (an alpha-imino acid) by reduced nicotinamide adenine dinucleotide phosphate (NADPH) are compared with those for the reduction of the same imino acid by the glutamate dehydrogenase-NADPH complex. The enthalpies of acti...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00341a013

    authors: Srinivasan R,Fisher HF

    更新日期:1985-09-24 00:00:00

  • Fluorescence studies suggest a role for alpha-synuclein in the phosphatidylinositol lipid signaling pathway.

    abstract::Alpha-synuclein plays a key role in the pathogenesis of many neurodegenerative diseases. To date, its cellular role has yet to be determined, although it has been proposed to be connected to calcium and G protein-mediated dopamine signaling. Alpha-synuclein is known to bind strongly to model membrane surfaces where it...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0487140

    authors: Narayanan V,Guo Y,Scarlata S

    更新日期:2005-01-18 00:00:00

  • Effects of ring substituents and linker chains on the bifunctional intercalation of diacridines into deoxyribonucleic acid.

    abstract::Sedimentation experiments with closed circular duplex PM2 deoxyribonucleic acid (DNA) and viscosity measurements with sonicated rodlike DNA fragments have been performed to investigate unwinding and extension of the DNA helix associated with binding of homologous series of diacridines. When the acridine nuclei are lin...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00566a026

    authors: Wright RG,Wakelin LP,Fieldes A,Acheson RM,Waring MJ

    更新日期:1980-12-09 00:00:00

  • Occurrence of a reduced nicotinamide adenine dinucleotide oxidase activity linked to a cytochrome system in renal brush border membranes.

    abstract::NADH oxidase activity has been detected in luminal membrane derived from the proximal tubules of rat kidney (brush border membranes). The cytochromes associated with these membranes [García, M.L., Benavides, J., Valdivieso, F., Mayor, F., & Giménez-Gallego, G. (1978) Biochem. Biophys. Res. Commun. 82, 738-744] were re...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00562a019

    authors: Giménez-Gallego G,Benavides J,García ML,Valdivieso F

    更新日期:1980-10-14 00:00:00

  • Altering the reaction specificity of eukaryotic ornithine decarboxylase.

    abstract::Ornithine decarboxylase (ODC) catalyzes the first committed step in the biosynthesis of polyamines, and it has been identified as a drug target for the treatment of African sleeping sickness, caused by Trypanosoma brucei. ODC is a pyridoxal 5'-phosphate (PLP) dependent enzyme and an obligate homodimer. X-ray structura...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi001209s

    authors: Jackson LK,Brooks HB,Osterman AL,Goldsmith EJ,Phillips MA

    更新日期:2000-09-19 00:00:00

  • Phosphoinositide-specific phospholipase C-delta 1: effect of monolayer surface pressure and electrostatic surface potentials on activity.

    abstract::We added phospholipase C-delta 1 (PLC-delta) to the aqueous subphase beneath monolayers formed from mixtures of phosphatidylinositol 4,5-bisphosphate (2% PIP2), phosphatidylserine (33% PS), and phosphatidylcholine (65% PC) and then measured the initial rate of hydrolysis of PIP2 after addition of 10 microM free calciu...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00166a006

    authors: Rebecchi M,Boguslavsky V,Boguslavsky L,McLaughlin S

    更新日期:1992-12-29 00:00:00

  • Preferential carcinogen-DNA adduct formation at codons 12 and 14 in the human K-ras gene and their possible mechanisms.

    abstract::In the ras gene superfamily, codon 12 (-TGGTG-) of the K-ras gene is the most frequently mutated codon in human cancers. Recently, we have found that bulky chemical carcinogens preferentially form DNA adducts at codons 12 and 14 (-CGTAG-) in the K-ras gene in normal human bronchial epithelial (NHBE) cells. Furthermore...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi034631s

    authors: Hu W,Feng Z,Tang MS

    更新日期:2003-08-26 00:00:00

  • Investigating the cause of the alkaline transition of phytocyanins.

    abstract::The phytocyanins are a family of plant cupredoxins that have been subdivided into the stellacyanins, plantacyanins, and uclacyanins. All of these proteins possess the typical type 1 His(2)Cys equatorial ligand set at their mononuclear copper sites, but the stellacyanins have an axial Gln ligand in place of the weakly ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi048256v

    authors: Harrison MD,Yanagisawa S,Dennison C

    更新日期:2005-03-01 00:00:00

  • Oxidative damage in MauG: implications for the control of high-valent iron species and radical propagation pathways.

    abstract::The di-heme enzyme MauG catalyzes the oxidative biosynthesis of a tryptophan tryptophylquinone cofactor on a precursor of the enzyme methylamine dehydrogenase (preMADH). Reaction of H2O2 with the diferric form of MauG, or reaction of O2 with diferrous MauG, forms the catalytic intermediate known as bis-Fe(IV), which a...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi401441h

    authors: Yukl ET,Williamson HR,Higgins L,Davidson VL,Wilmot CM

    更新日期:2013-12-31 00:00:00

  • Site-directed mutagenesis of highly conserved residues in helix VIII of subunit I of the cytochrome bo ubiquinol oxidase from Escherichia coli: an amphipathic transmembrane helix that may be important in conveying protons to the binuclear center.

    abstract::Cytochrome bo from Escherichia coli is a ubiquinol oxidase which is a member of the superfamily of heme-copper respiratory oxidases. This superfamily, which includes the eukaryotic cytochrome c oxidases, has in common a bimetallic center consisting of a high-spin heme component and a copper atom (CuB) which is the sit...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00092a029

    authors: Thomas JW,Lemieux LJ,Alben JO,Gennis RB

    更新日期:1993-10-19 00:00:00

  • Evidence for unique homologous peptide sequences around the glycosylated seryl and threonyl residues in polysialoglycoproteins isolated from the unfertilized eggs of the Pacific salmon Oncorhynchus keta.

    abstract::Structures of glycopeptides obtained by exhaustive Pronase digestion of high molecular weight (1.7 X 10(5)) salmon egg polysialoglycoprotein have been elucidated. Six principal glycopeptides isolated by gel chromatography and DEAE-Sephadex A-25 chromatography in the absence or presence of borate ion were analyzed for ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00341a029

    authors: Shimamura M,Inoue Y,Inoue S

    更新日期:1985-09-24 00:00:00

  • Cyclic peptides incorporating 4-carboxyphenylalanine and phosphotyrosine are potent inhibitors of pp60(c-)(src).

    abstract::The protein tyrosine kinase, pp60(c-)(src), is involved in cellular signaling and is activated during mitosis and in various tumors. We have been employing cyclic decapeptides to identify the determinants for substrate binding and phosphorylation to develop inhibitors competitive with protein substrates of Src. A stru...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi992994f

    authors: Wang W,Ramdas L,Sun G,Ke S,Obeyesekere NU,Budde RJ,McMurray JS

    更新日期:2000-05-02 00:00:00

  • Coherent dynamics during the primary electron-transfer reaction in membrane-bound reaction centers of Rhodobacter sphaeroides.

    abstract::The temporal evolution of the near-infrared stimulated emission band of the special pair excited state (P*) in the reaction center of Rhodobacter sphaeroides has been studied in intracytoplasmic membranes of the antenna-deficient RCO1 mutant at 10 K with a resolution of 30 fs. On the 100-fs time scale the emission ban...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00188a002

    authors: Vos MH,Jones MR,Hunter CN,Breton J,Lambry JC,Martin JL

    更新日期:1994-06-07 00:00:00

  • Mapping the interfacial binding surface of human secretory group IIa phospholipase A2.

    abstract::Human secretory group IIa phospholipase A2 (hIIa-PLA2) contains a large number of prominent cationic patches on its molecular surface and has exceptionally high affinity for anionic surfaces, including anionic membranes. To identify the cationic amino acid residues that support binding of hIIa-PLA2 to anionic membrane...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi971200z

    authors: Snitko Y,Koduri RS,Han SK,Othman R,Baker SF,Molini BJ,Wilton DC,Gelb MH,Cho W

    更新日期:1997-11-25 00:00:00

  • DNA photolyase repairs the trans-syn cyclobutane thymine dimer.

    abstract::DNA photolyases catalyze the splitting of the cyclobutane ring joining the two dihydropyrimidines of a pyrimidine dimer by a photoinduced electron-transfer reaction. Previous studies concluded that photolyase repairs only the cis-syn form of the eight stereoisomers of the cyclobutane pyrimidine dimer (Pyr[ ]Pyr). In t...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00079a001

    authors: Kim ST,Malhotra K,Smith CA,Taylor JS,Sancar A

    更新日期:1993-07-20 00:00:00

  • Interaction of the low-affinity receptor CD23/Fc epsilonRII lectin domain with the Fc epsilon3-4 fragment of human immunoglobulin E.

    abstract::CD23/Fc epsilonRII, the low-affinity receptor for IgE, is a multifunctional protein of importance in blood cell development and the immune system. We have studied the interaction of CD23 with IgE in solution using hydrodynamic methods applied to recombinant fragments of both ligands: sCD23, corresponding to the solubl...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi961231e

    authors: Shi J,Ghirlando R,Beavil RL,Beavil AJ,Keown MB,Young RJ,Owens RJ,Sutton BJ,Gould HJ

    更新日期:1997-02-25 00:00:00

  • Effect of pH on the active site of an Arg121Cys mutant of the metallo-beta-lactamase from Bacillus cereus: implications for the enzyme mechanism.

    abstract::The zinc-dependent metallo-beta-lactamases are a group of bacterial enzymes that pose a threat to the future efficacy of present-day antibiotics. Their mechanism is poorly understood, and there are no clinically useful inhibitors. While most members of the group contain two tightly bound zinc ions in their active site...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi047709t

    authors: Davies AM,Rasia RM,Vila AJ,Sutton BJ,Fabiane SM

    更新日期:2005-03-29 00:00:00