Histone H2A phosphorylation in animal cells: functional considerations.

Abstract:

:We have sought to determine the role of histone H2A phosphorylation in chromatin by examining the distribution of the phosphorylated and unphosphorylated forms of this core histone within the nuclei of mouse and human cells. At any time, only about 15% of the H2A of whole chromatin is in the phosphorylated form, and its phosphate is rapidly turned over, even in quiescent cells that contain a functional nucleus. The phosphorylations and dephosphorylations are not specifically relate to progress through the cell cycle, nor to DNA synthesis or repair, and they are not selectively nucleolar. Euchromatin is substantially enriched with phosphorylated H2A but is not the exclusive repository of it. Possible roles of this modification of H2A are considered.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Prentice DA,Loechel SC,Kitos PA

doi

10.1021/bi00539a021

subject

Has Abstract

pub_date

1982-05-11 00:00:00

pages

2412-20

issue

10

eissn

0006-2960

issn

1520-4995

journal_volume

21

pub_type

杂志文章
  • Time-resolved fluorescence investigations of the interaction of the voltage-sensitive probe RH421 with lipid membranes and proteins.

    abstract::Fluorescence lifetimes and fluorescence anisotropy decays of the voltage-sensitive styryl-pyridinium dye RH421 have been measured in the presence of dimyristoylphosphatidylcholine vesicles, the water soluble enzyme ribulose 1,5-bisphosphate carboxylase/oxygenase (rubisco), and Na+,K(+)-ATPase-containing membrane fragm...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00037a015

    authors: Visser NV,van Hoek A,Visser AJ,Frank J,Apell HJ,Clarke RJ

    更新日期:1995-09-19 00:00:00

  • A reconstituted light-harvesting complex from the green sulfur bacterium Chlorobium tepidum containing CsmA and bacteriochlorophyll a.

    abstract::Green sulfur bacteria possess two light-harvesting antenna systems, the chlorosome and the Fenna-Matthews-Olson (FMO) protein. In addition to self-aggregated bacteriochlorophyll (BChl) c, chlorosomes of Chlorobium tepidum contain a small amount of BChl a (ratio 100:1). The chlorosomal BChl a is associated with CsmA, a...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi701616r

    authors: Pedersen MØ,Pham L,Steensgaard DB,Miller M

    更新日期:2008-02-05 00:00:00

  • Deamidation Slows Curli Amyloid-Protein Aggregation.

    abstract::Nonenzymatic deamidation of asparagine and glutamine in peptides and proteins is a frequent modification both in vivo and in vitro. The biological effect is not completely understood, but it is often associated with protein degradation and loss of biological function. Here we describe the deamidation of CsgA, the majo...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.7b00241

    authors: Wang H,Shu Q,Frieden C,Gross ML

    更新日期:2017-06-13 00:00:00

  • Kinetic analyses of mutations in the glycine-rich loop of cAMP-dependent protein kinase.

    abstract::The conserved glycines in the glycine-rich loop (Leu-Gly50-Thr-Gly52-Ser-Phe-Gly55-Arg-Val) of the catalytic (C) subunit of cAMP-dependent protein kinase were each mutated to Ser (G50S, G52S, and G55S). The effects of these mutations were assessed here using both steady-state and pre-steady-state kinetic methods. Whil...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi972987w

    authors: Grant BD,Hemmer W,Tsigelny I,Adams JA,Taylor SS

    更新日期:1998-05-26 00:00:00

  • Kinetics of ribosome dissociation and subunit association studied in a light-scattering stopped-flow apparatus.

    abstract::The association-dissociation kinetics of ribosomes from Escherichia coli have been studied under various conditions in a light-scattering stopped-flow apparatus. The dissociation reaction at 2 mg/ml at 25 degrees C, induced by lowering the MgCl2 concentration from 18 to 3 mM, can best be described by three independent...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00671a010

    authors: Görisch H,Goss DJ,Parkhurst LJ

    更新日期:1976-12-28 00:00:00

  • Kinetics of binding of chicken cystatin to papain.

    abstract::The kinetics of binding of chicken cystatin to papain were studied by stopped-flow fluorometry under pseudo-first-order conditions, i.e., with an excess of inhibitor. All reactions showed first-order behavior, and the observed pseudo-first-order rate constant increased linearly with the cystatin concentration up to th...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00430a022

    authors: Björk I,Alriksson E,Ylinenjärvi K

    更新日期:1989-02-21 00:00:00

  • hsp70 interacting protein Hip does not affect glucocorticoid receptor folding by the hsp90-based chaperone machinery except to oppose the effect of BAG-1.

    abstract::Reticulocyte lysate contains a chaperone system that assembles glucocorticoid receptor (GR).hsp90 heterocomplexes. Using purified proteins, we have prepared a five-protein heterocomplex assembly system consisting of two proteins essential for heterocomplex assembly-hsp90 and hsp70-and three proteins that act as co-cha...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi001671c

    authors: Kanelakis KC,Murphy PJ,Galigniana MD,Morishima Y,Takayama S,Reed JC,Toft DO,Pratt WB

    更新日期:2000-11-21 00:00:00

  • Generation and characterization of two transgenic mouse lines expressing human ApoE2 in neurons and glial cells.

    abstract::Apolipoprotein E (apoE) isoforms are key determinants of susceptibility to late-onset Alzheimer's disease (AD). The epsilon 4 and epsilon 2 alleles have been associated with increased and decreased risk for AD, respectively. We have generated and characterized transgenic mice in which the human apoE2 gene is expressed...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi015971l

    authors: Georgopoulos S,McKee A,Kan HY,Zannis VI

    更新日期:2002-07-30 00:00:00

  • Circular dichroism studies on the interaction of tryptophan synthase with pyridoxal 5'-phosphate.

    abstract::The interaction between the beta 2 subunit of tryptophan synthase and the coenzyme pyridoxal 5'-phosphate (PLP) is characterized by induced circular dichroism (CD) in the near-UV (260-285 nm) and in the visible region (320-480 nm, extrinsic Cotton effect). Because of its high mean residue ellipticity ([theta] = 56 deg...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00525a017

    authors: Balk H,Merkl I,Bartholmes P

    更新日期:1981-10-27 00:00:00

  • Structural characterization of two interchangeable conformations of a 2-aminofluorene-modified DNA oligomer by NMR and energy minimization.

    abstract::One- and two-dimensional NMR spectroscopy and energy minimization calculations were used to investigate the conformation of a 2-aminofluorene- (AF-) modified model human c-H-ras1 protooncogene codon 61 deoxyoligonucleotide duplex, d(C1-A2-C3-C4-A5- [AF-G6]-G7-A8-A9-C10).-d(G11-T12-T13-C14-C15-T16 -G17-G18-T19-G20), in...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00250a012

    authors: Eckel LM,Krugh TR

    更新日期:1994-11-22 00:00:00

  • Solution structure of the biologically relevant G-quadruplex element in the human c-MYC promoter. Implications for G-quadruplex stabilization.

    abstract::The nuclease hypersensitivity element III(1) (NHE III(1)) of the c-MYC promoter strongly controls the transcriptional activity of the c-MYC oncogene. The purine-rich strand of the NHE III(1) element has been shown to be a silencer element for c-MYC transcription upon formation of a G-quadruplex structure. We have dete...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi048242p

    authors: Ambrus A,Chen D,Dai J,Jones RA,Yang D

    更新日期:2005-02-15 00:00:00

  • Leaving group dependence and proton inventory studies of the phosphorylation of a cytoplasmic phosphotyrosyl protein phosphatase from bovine heart.

    abstract::The kcat and Km values for the bovine heart low molecular weight phosphotyrosyl protein phosphatase catalyzed hydrolysis of 16 aryl phosphate monoesters and of five alkyl phosphate monoesters having the structure Ar(CH2)nOPO3H2 (n = 1-5) were measured at pH 5.0 and 37 degrees C. With the exception of alpha-naphthyl ph...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00101a006

    authors: Zhang ZY,Van Etten RL

    更新日期:1991-09-17 00:00:00

  • Catalytic mechanism of enzymes: preorganization, short strong hydrogen bond, and charge buffering.

    abstract::During the past decade, there has been much debate about the enormous catalytic rate enhancement observed in enzymatic reactions involving carbanion intermediates. Our recent theoretical study has demonstrated the importance of the short strong hydrogen bond (SSHB) in the enzymatic reactions. Nevertheless, other recen...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0255118

    authors: Kim KS,Kim D,Lee JY,Tarakeshwar P,Oh KS

    更新日期:2002-04-23 00:00:00

  • Synthesis and study of phosphoenolthiopyruvate.

    abstract::Phosphoenolthiopyruvate, the analogue of phosphoenolpyruvate in which the bridging oxygen of the phosphate ester is replaced by sulfur, has been synthesized from methyl acrylate and dimethyl (chlorothio)phosphonate. The compound is a substrate for alkaline phosphatase, pyruvate kinase, enolase, and phosphoenolpyruvate...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00404a038

    authors: Sikkema KD,O'Leary MH

    更新日期:1988-02-23 00:00:00

  • Purification, characterization, and substrate and inhibitor structure-activity studies of rat liver FAD-AMP lyase (cyclizing): preference for FAD and specificity for splitting ribonucleoside diphosphate-X into ribonucleotide and a five-atom cyclic phospho

    abstract::An enzyme with FAD-AMP lyase (cyclizing) activity, splitting FAD to AMP and riboflavin 4',5'-phosphate (cFMN), was recently identified [Fraiz, F., et al. (1998) Biochem. J. 330, 881-888]. Now, it has been purified to apparent homogeneity from a rat liver supernatant, by a procedure that includes affinity for ADP-agaro...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0157159

    authors: Cabezas A,Pinto RM,Fraiz F,Canales J,González-Santiago S,Cameselle JC

    更新日期:2001-11-13 00:00:00

  • Independent heterologous fibrillation of insulin and its B-chain peptide.

    abstract::Insulin is very prone to form amyloid fibrils under slightly destabilizing conditions, and the B-chain region plays a critical role in the fibrillation. We show here that the isolated B-chain peptide of bovine insulin also forms fibrils at both acidic and neutral pH. When a mixture of insulin and the B-chain peptide w...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi051658y

    authors: Hong DP,Fink AL

    更新日期:2005-12-20 00:00:00

  • Plasmin substrate binding site cooperativity guides the design of potent peptide aldehyde inhibitors.

    abstract::Perioperative bleeding is a cause of major blood loss and is associated with increased rates of postoperative morbidity and mortality. To combat this, antifibrinolytic inhibitors of the serine protease plasmin are commonly used to reduce bleeding during surgery. The most effective and previously widely used of these i...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi201203y

    authors: Swedberg JE,Harris JM

    更新日期:2011-10-04 00:00:00

  • Detailed structural characterization of unbound protein phosphatase 1 inhibitors.

    abstract::Protein phosphatase 1 (PP1) is an essential and ubiquitous serine/threonine protein phosphatase that is regulated by more than 100 known inhibitor and targeting proteins. It is currently unclear how protein inhibitors distinctly and specifically regulate PP1 to enable rapid responses to cellular alterations. We demons...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi801308y

    authors: Dancheck B,Nairn AC,Peti W

    更新日期:2008-11-25 00:00:00

  • Role of the C-terminal 28 residues of beta2-microglobulin in amyloid fibril formation.

    abstract::Beta2microglobulin (beta2m) is the major protein component of the fibrillar amyloid deposits isolated from patients diagnosed with dialysis-related amyloidosis (DRA). While investigating the molecular mechanism of amyloid fibril formation by beta2m, we found that the beta2m C-terminal peptide of 28 residues (cbeta2m) ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0301486

    authors: Ivanova MI,Gingery M,Whitson LJ,Eisenberg D

    更新日期:2003-11-25 00:00:00

  • NMR structures of loop B RNAs from the stem-loop IV domain of the enterovirus internal ribosome entry site: a single C to U substitution drastically changes the shape and flexibility of RNA.

    abstract::The 5'-untranslated region of positive-strand RNA viruses harbors many cis-acting RNA structural elements that are important for various viral processes such as replication, translation, and packaging of new virions. Among these is loop B RNA of the stem-loop IV domain within the internal ribosomal entry site (IRES) o...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0363228

    authors: Du Z,Ulyanov NB,Yu J,Andino R,James TL

    更新日期:2004-05-18 00:00:00

  • Nucleosome Histone Tail Conformation and Dynamics: Impacts of Lysine Acetylation and a Nearby Minor Groove Benzo[a]pyrene-Derived Lesion.

    abstract::Histone tails in nucleosomes play critical roles in regulation of many biological processes, including chromatin compaction, transcription, and DNA repair. Moreover, post-translational modifications, notably lysine acetylation, are crucial to these functions. While the tails have been intensively studied, how the stru...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.6b01208

    authors: Fu I,Cai Y,Geacintov NE,Zhang Y,Broyde S

    更新日期:2017-04-11 00:00:00

  • Surface denaturation and amyloid fibril formation of insulin at model lipid-water interfaces.

    abstract::We consider the effects that different lipid surfaces have upon the denaturation and subsequent formation of amyloid fibrils of bovine insulin. The adsorption and unfolding kinetics of insulin being adsorbed onto the different lipid surfaces under denaturing conditions are studied using FTIR ATR spectroscopy and are c...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi020525z

    authors: Sharp JS,Forrest JA,Jones RA

    更新日期:2002-12-31 00:00:00

  • Carboxymethylated liver alcohol dehydrogenase: kinetic and thermodynamic characterization of reactions with substrates and inhibitors.

    abstract::Liver alcohol dehydrogenase (LADH) carboxymethylated at Cys-46 (CMLADH) forms two different ternary complexes with 4-trans-(N,N-dimethylamino)cinnamaldehyde (DACA). The complex with reduced nicotinamide adenine dinucleotide (NADH) is characterized by a 38-nm red shift of the long-wavelength pi, pi* transition to 436 n...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00321a085

    authors: Dahl KH,Dunn MF

    更新日期:1984-12-18 00:00:00

  • Membrane binding kinetics of protein kinase C betaII mediated by the C2 domain.

    abstract::Conventional isoforms of protein kinase C (PKC) are activated when their two membrane-targeting modules, the C1 and C2 domains, bind the second messengers diacylglycerol (DG) and Ca2+, respectively. This study investigates the mechanism of Ca2+-induced binding of PKC betaII to anionic membranes mediated by the C2 doma...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi010761u

    authors: Nalefski EA,Newton AC

    更新日期:2001-11-06 00:00:00

  • Zinc is associated with the beta subunit of DNA-dependent RNA polymerase of Bacillus subtilis.

    abstract::The Bacillus subtilis DNA-dependent RNA polymerase holoenzyme and core enzyme each contain approximately two atoms of zinc per molecule. When the dissociated subunits of the enzyme are passed through a blue dextran-Sepharose affinity column, only the beta subunit binds to the column. The total zinc content of the enzy...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00632a012

    authors: Halling SM,Sanchez-Anzaldo FJ,Fukuda R,Doi RH,Meares CF

    更新日期:1977-06-28 00:00:00

  • DNA-dependent adenosinetriphosphatase B from mouse FM3A cells has DNA helicase activity.

    abstract::We have detected at least four forms of DNA-dependent ATPase in mouse FM3A cell extracts [Tawaragi, Y., Enomoto, T., Watanabe, Y., Hanaoka, F., & Yamada, M. (1984) Biochemistry 23, 529-533]. The purified fraction of one of the four forms, ATPase B, has been shown to have DNA helicase activity by using a DNA substrate ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00384a038

    authors: Seki M,Enomoto T,Hanaoka F,Yamada M

    更新日期:1987-05-19 00:00:00

  • ptl-1, a Caenorhabditis elegans gene whose products are homologous to the tau microtubule-associated proteins.

    abstract::The tau microtubule-associated proteins are axonal proteins that have been implicated in axonal outgrowth, microtubule spacing, and microtubule bundling. Moreover, tau is the major structural component of the paired helical filaments present in the brains of Alzheimer's disease patients. The Caenorhabditis elegans Gen...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi952646n

    authors: McDermott JB,Aamodt S,Aamodt E

    更新日期:1996-07-23 00:00:00

  • 4-Hydroxynonenal self-limits fas-mediated DISC-independent apoptosis by promoting export of Daxx from the nucleus to the cytosol and its binding to Fas.

    abstract::Previously, we have shown that 4-hydroxynonenal (4-HNE) induces Fas-mediated apoptosis in HLE B-3 cells through a pathway which is independent of FasL, FADD, procaspase 8, and DISC (Li, J., et al. (2006) Biochemistry 45, 12253-12264). The involvement of Daxx has also been suggested in this pathway, but its role is not...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi701559f

    authors: Sharma R,Sharma A,Dwivedi S,Zimniak P,Awasthi S,Awasthi YC

    更新日期:2008-01-08 00:00:00

  • Electrophoretic mobilities and diffusion coefficients of hemoglobin at high pH.

    abstract::Diffusion studies by photon correlation of scattered laser light confirm the dissociation of the tetrameric form of human carboxyhemoglobin to dimers above pH 10 and provide new estimates of the subunit dissociation equilibrium constants in this pH range. Electrophoretic light-scattering experiments under the same con...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00616a014

    authors: Haas DD,Ware BR

    更新日期:1978-11-14 00:00:00

  • Structural and functional analysis of EcoRI DNA methyltransferase by proteolysis.

    abstract::Native EcoRI DNA methyltransferase (Mtase, Mr 38,050) is proteolyzed by trypsin to generate an intermediate 36-kDa fragment (p36) followed by the formation of two polypeptides of Mr 23,000 and 13,000 (p23 and p13, respectively). Protein sequence analysis of the tryptic fragments indicates that p36 results from removal...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00225a030

    authors: Reich NO,Maegley KA,Shoemaker DD,Everett E

    更新日期:1991-03-19 00:00:00