Conformational drift and cryoinactivation of lactate dehydrogenase.

Abstract:

:Solutions of porcine lactate dehydrogenase of micromolar concentration kept at 4 degrees C for several days lose the greater part of their enzymic activity but recover it when returned to room temperature. The rate of spoiling decreases and the rate of recovery increases with the concentration of the solutions. The decrease in tetramer stability in the cold is shown by experiments of pressure dissociation at various temperatures and confirmed because isozyme hybridization occurs in parallel with the inactivation at low temperature but is absent at room temperature. Cold-inactivated solutions contain tetramers that dissociate much more readily than those of the fully active solutions. It is postulated that cryoinactivation, like pressure inactivation, takes place through a cycle of dissociation, conformational drift [King, L., & Weber, G. (1986) Biochemistry (second paper of three in this issue)] and reassociation into inactive tetramers.

journal_name

Biochemistry

journal_title

Biochemistry

authors

King L,Weber G

doi

10.1021/bi00360a024

subject

Has Abstract

pub_date

1986-06-17 00:00:00

pages

3637-40

issue

12

eissn

0006-2960

issn

1520-4995

journal_volume

25

pub_type

杂志文章
  • Crystal structures of substrate and substrate analog complexes of protocatechuate 3,4-dioxygenase: endogenous Fe3+ ligand displacement in response to substrate binding.

    abstract::Protocatechuate 3,4-dioxygenase (3,4-PCD) utilizes a ferric ion to catalyze the aromatic ring cleavage of 3,4-dihydroxybenzoate (PCA) by incorporation of both atoms of dioxygen to yield beta-carboxy-cis, cis-muconate. The crystal structures of the anaerobic 3,4-PCD.PCA complex, aerobic complexes with two heterocyclic ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi970469f

    authors: Orville AM,Lipscomb JD,Ohlendorf DH

    更新日期:1997-08-19 00:00:00

  • Evolutionary optimization of the catalytic effectiveness of an enzyme.

    abstract::The kinetic and thermodynamic features of reactions catalyzed by present-day enzymes appear to be the consequence of the evolution of these proteins toward maximal catalytic effectiveness. These features are identified and analyzed (in detail for one substrate-one product enzymes) by using ideas that link the energeti...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00450a009

    authors: Burbaum JJ,Raines RT,Albery WJ,Knowles JR

    更新日期:1989-11-28 00:00:00

  • Rapid intrachain binding of histidine-26 and histidine-33 to heme in unfolded ferrocytochrome C.

    abstract::Time-resolved spectroscopic studies of unfolded horse iron(II) cytochrome c have suggested that the imidazole side chains of His26 and His33 bind transiently to the heme iron on microsecond time scales, after photodissociation of a carbon monoxide ligand from the heme. Our studies of four variants of cytochrome c (hor...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi011371a

    authors: Hagen SJ,Latypov RF,Dolgikh DA,Roder H

    更新日期:2002-01-29 00:00:00

  • Cloning and expression of three rabbit kidney cDNAs encoding lauric acid omega-hydroxylases.

    abstract::cDNAs encoding three cytochrome P-450 enzymes were cloned from a rabbit kidney cDNA library. These three cDNAs exhibit greater than 90% nucleotide sequence identity across the coding region. This degree of sequence identity is also seen with P450IVA4, an enzyme that catalyzes the omega-hydroxylation of prostaglandins ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00456a004

    authors: Johnson EF,Walker DL,Griffin KJ,Clark JE,Okita RT,Muerhoff AS,Masters BS

    更新日期:1990-01-30 00:00:00

  • Human secreted carbonic anhydrase: cDNA cloning, nucleotide sequence, and hybridization histochemistry.

    abstract::Complementary DNA clones coding for the human secreted carbonic anhydrase isozyme (CA VI) have been isolated and their nucleotide sequences determined. These clones identify a 1.45-kb mRNA that is present in high levels in parotid submandibular salivary glands but absent in other tissues such as the sublingual gland, ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00216a035

    authors: Aldred P,Fu P,Barrett G,Penschow JD,Wright RD,Coghlan JP,Fernley RT

    更新日期:1991-01-15 00:00:00

  • Fourier transform infrared spectroscopy and electrochemistry of the primary electron donor in Rhodobacter sphaeroides and Rhodopseudomonas viridis reaction centers: vibrational modes of the pigments in situ and evidence for protein and water modes affecte

    abstract::Protein electrochemistry in an ultra-thin-layer electrochemical cell suitable for UV/vis and IR spectroscopy has been used to characterize the vibrational modes of the primary electron donors of Rhodobacter sphaeroides and Rhodopseudomonas viridis reaction centers in their neutral and cation radical states (P and P+, ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00068a007

    authors: Leonhard M,Mäntele W

    更新日期:1993-05-04 00:00:00

  • Specific proteolysis of human plasminogen by a 24 kDa endopeptidase from a novel Chryseobacterium Sp.

    abstract::A novel single polypeptide endopeptidase of 24 kDa (24k-endopeptidase) was purified with a yield of 300-400 microg/L from conditioned medium of a bacterial strain which was identified as a new species in the genus Chryseobacterium Sp. on the basis of its 16S rDNA sequence and DNA:DNA hybridizations. The NH(2)-terminal...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi992014r

    authors: Lijnen HR,Van Hoef B,Ugwu F,Collen D,Roelants I

    更新日期:2000-01-18 00:00:00

  • A major proportion of N-glycoproteins are transiently glucosylated in the endoplasmic reticulum.

    abstract::N-linked, high-mannose-type oligosaccharides lacking glucose residues may be transiently glucosylated directly from UDP-Glc in the endoplasmic reticulum of mammalian, plant, fungal, and protozoan cells. The products formed have been identified as N-linked Glc1Man5-9GlcNAc2 and glucosidase II is apparently the enzyme r...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00226a017

    authors: Gañán S,Cazzulo JJ,Parodi AJ

    更新日期:1991-03-26 00:00:00

  • Proximity between nucleotide/dinucleotide and metal ion binding sites in DNA-dependent RNA polymerase from Escherichia coli.

    abstract::In order to understand translocation in transcription, it is important to develop a continuous functional assay for RNA polymerase (RNAP) activity in vitro. Fluorescent derivatives of ATP, UTP, UpA, and CpA with aminonaphthalene-5-sulfonic acid (AmNS) attached to the nucleotide triphosphates via a gamma-phosphoramidat...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00143a013

    authors: Tyagi SC,Wu FY

    更新日期:1992-07-21 00:00:00

  • Synthesis and biological evaluation in vitro of selective, high affinity peptide antagonists of human melanin-concentrating hormone action at human melanin-concentrating hormone receptor 1.

    abstract::Human melanin-concentrating hormone (hMCH) and many of its analogues are potent but nonspecific ligands for human melanin-concentrating hormone receptors 1 and 2 (hMCH-1R and hMCH-2R). To differentiate between the physiological functions of these receptors, selective antagonists are needed. In this study, analogues of...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0200514

    authors: Bednarek MA,Hreniuk DL,Tan C,Palyha OC,MacNeil DJ,Van der Ploeg LH,Howard AD,Feighner SD

    更新日期:2002-05-21 00:00:00

  • Effects of 3 beta-[2-(diethylamino)ethoxy]androst-5-en-17-one on the synthesis of cholesterol and ubiquinone in rat intestinal epithelial cell cultures.

    abstract::The relationship between cholesterol and ubiquinone synthesis in rat intestinal epithelial cell cultures was examined by using 3 beta-[2-(diethylamino)ethoxy]androst-5-en-17-one hydrochloride (U18666A). Addition of U18666A to cells caused a greater than 90% inhibition of incorporation of [3H]acetate into cholesterol a...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00294a001

    authors: Sexton RC,Panini SR,Azran F,Rudney H

    更新日期:1983-12-06 00:00:00

  • Affinity labeling of the folate-methotrexate transporter from Leishmania donovani.

    abstract::An affinity labeling technique has been developed to identify the folate-methotrexate transporter of Leishmania donovani promastigotes using "activated" derivatives of the ligands. These "activated" derivatives were synthesized by incubating folate and methotrexate with a 10-fold excess of 1-ethyl-3-[3-(dimethylamino)...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00443a023

    authors: Beck JT,Ullman B

    更新日期:1989-08-22 00:00:00

  • Disulfide structure of the leucine-rich repeat C-terminal cap and C-terminal stalk region of Nogo-66 receptor.

    abstract::Nogo-66 receptor (NgR1) is a leucine-rich repeat (LRR) protein that forms part of a signaling complex modulating axon regeneration. Previous studies have shown that the entire LRR region of NgR1, including the C-terminal cap of the LRR, LRRCT, is needed for ligand binding, and that the adjacent C-terminal region (CT s...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0517483

    authors: Wen D,Wildes CP,Silvian L,Walus L,Mi S,Lee DH,Meier W,Pepinsky RB

    更新日期:2005-12-20 00:00:00

  • Diepoxybutane cross-links DNA at 5'-GNC sequences.

    abstract::Epoxides are cancer-causing agents chemically analogous to the nitrogen mustards, a family of powerful antitumor drugs. We found that the DNA interstrand cross-linking sequence preference of diepoxybutane is the same as that of the mustard mechlorethamine: 5'-GNC. Therefore, the genomic site of cross-linking alone can...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00059a034

    authors: Millard JT,White MM

    更新日期:1993-03-02 00:00:00

  • Reevaluation of interaction of cis-dichloro(ethylenediamine)platinum(II) with DNA.

    abstract::Intrastrand cross-links represent the majority of modifications in DNA resulting from interaction with the cancer chemotherapeutic drug cis-diamminedichloroplatinum(II) (cis-DDP). These adducts were recently characterized although several discrepancies remained to be resolved. In these studies, [3H]-cis-dichloro(ethyl...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00361a026

    authors: Eastman A

    更新日期:1986-07-01 00:00:00

  • Characterization of a cloned human dihydrotestosterone/androstanediol UDP-glucuronosyltransferase and its comparison to other steroid isoforms.

    abstract::A human cDNA, UDPGTh-3, encoding a dihydrotestosterone/5 alpha-androstane-3 alpha,17 beta-diol UDP- glucuronosyltransferase (transferase) has been isolated and characterized. The nucleotide sequence of UDPGTh-3 encodes a 530 amino acid protein with a typical membrane insertion-signal peptide, a membrane-anchoring doma...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00091a015

    authors: Chen F,Ritter JK,Wang MG,McBride OW,Lubet RA,Owens IS

    更新日期:1993-10-12 00:00:00

  • Nuclear overhauser studies of CCGGAp, ACCGGp, and ACCGGUp.

    abstract::Nuclear Overhauser effect (NOE) measurements are reported for the nonexchangeable base and ribose 1' proton resonances of CCGGAp, ACCGGp, and ACCGGUp. The results permit assignment of these resonances to particular nucleotides in the sequences. The NOE data rule out conformations containing syn glycosidic linkages and...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00271a005

    authors: Petersheim M,Turner DH

    更新日期:1983-01-18 00:00:00

  • Effects of sterol structure and exogenous lipids on the transbilayer distribution of sterols in the membrane of Mycoplasma capricolum.

    abstract::Stopped-flow kinetic measurements of the association of filipin with sterols in intact cells and isolated membranes of Mycoplasma capricolum were used to study the effects of varying the phospholipid in the membrane. The phospholipid composition and content of the membrane were varied by growing cells in an albumin-co...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00511a019

    authors: Clejan S,Bittman R,Rottem S

    更新日期:1981-04-14 00:00:00

  • Conformational Closure of the Catalytic Site of Human CD38 Induced by Calcium.

    abstract::First identified on the surface of lymphoids as a type II transmembrane protein, CD38 has now been established to have dual functions not only as a receptor but also as a multifunctional enzyme,catalyzing the synthesis of and hydrolysis of a general calcium messenger molecule, cyclic ADP-ribose(cADPR). The receptorial...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:

    authors: Liu Q,Graeff R,Kriksunov IA,Lam CM,Lee HC,Hao Q

    更新日期:2008-12-30 00:00:00

  • Cysteine pKa depression by a protonated glutamic acid in human DJ-1.

    abstract::Human DJ-1, a disease-associated protein that protects cells from oxidative stress, contains an oxidation-sensitive cysteine (C106) that is essential for its cytoprotective activity. The origin of C106 reactivity is obscure, due in part to the absence of an experimentally determined p K a value for this residue. We ha...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi800282d

    authors: Witt AC,Lakshminarasimhan M,Remington BC,Hasim S,Pozharski E,Wilson MA

    更新日期:2008-07-15 00:00:00

  • Structural characterization of the DC-SIGN-Lewis(X) complex.

    abstract::Dendritic cell-specific intracellular adhesion molecule-3-grabbing nonintegrin (DC-SIGN) is a C-type lectin highly expressed on the surface of antigen-presenting dendritic cells. DC-SIGN mediates interactions among dendritic cells, pathogens, and a variety of epithelia, myeloid cells, and endothelia by binding to high...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi5005014

    authors: Pederson K,Mitchell DA,Prestegard JH

    更新日期:2014-09-09 00:00:00

  • Is the PTPase-vanadate complex a true transition state analogue?

    abstract::Vanadate can often bind to phosphoryl transfer enzymes to form a trigonal-bipyramidal structure at the active site. The enzyme-vanadate dissociation constants in these enzymes are much lower than those for phosphate. Therefore, enzyme-bound vanadate moieties are often considered as transition state analogues. To test ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi016097z

    authors: Deng H,Callender R,Huang Z,Zhang ZY

    更新日期:2002-05-07 00:00:00

  • Modulation of P-glycoprotein phosphorylation and drug transport by sodium butyrate.

    abstract::P-Glycoprotein (Pgp) expression in cell lines derived from tumors arising from cells which normally express Pgp can be increased by sodium butyrate and other differentiating agents. Although the Pgp level increased 25-fold after sodium butyrate treatment in SW620 human colon carcinoma cells, the intracellular accumula...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00143a002

    authors: Bates SE,Currier SJ,Alvarez M,Fojo AT

    更新日期:1992-07-21 00:00:00

  • Two-step purification of the major phosphorylated protein in reticulocyte 40S ribosomal subunits.

    abstract::In reticulocytes, a single ribosomal protein, S13, has been shown to be phosphorylated by the cAMP-regulated protein kinases. The 40S ribosomal subunits were phosphorylated in vitro with [gamma-32P]ATP to facilitate the identification of S13 during the two-step purification procedure. Total ribosomal protein from the ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00604a003

    authors: Du Vernay VH Jr,Traugh JA

    更新日期:1978-05-30 00:00:00

  • Portability of epimerization domain and role of peptidyl carrier protein on epimerization activity in nonribosomal peptide synthetases.

    abstract::Incorporation of nonproteinogenic amino acids in small polypeptides synthesized by nonribosomal peptide synthetases (NRPS) significantly contributes to their biological activity. In these peptides, conversion of L-amino acids to the corresponding D-isomer is catalyzed by specialized NRPS modules that utilize an epimer...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi011595t

    authors: Linne U,Doekel S,Marahiel MA

    更新日期:2001-12-25 00:00:00

  • Single-turnover and pre-steady-state kinetics of the reaction of the adenine glycosylase MutY with mismatch-containing DNA substrates.

    abstract::The DNA repair enzyme MutY plays an important role in the prevention of DNA mutations resulting from the presence of the oxidatively damaged lesion 7,8-dihydro-8-oxo-2'-deoxyguanosine (OG) in DNA by the removal of misincorporated adenine residues in OG:A mispairs. MutY also exhibits adenine glycosylase activity toward...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi981594+

    authors: Porello SL,Leyes AE,David SS

    更新日期:1998-10-20 00:00:00

  • Solution structure of decorin-binding protein A from Borrelia burgdorferi.

    abstract::Decorin-binding protein A (DBPA) is an important lipoprotein from the bacterium Borrelia burgdorferi, the causative agent of Lyme disease. The absence of DBPA drastically reduces the pathogenic potential of the bacterium, and biochemical evidence indicates DBPA's interactions with the glycosaminoglycan (GAG) portion o...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi3007093

    authors: Wang X

    更新日期:2012-10-23 00:00:00

  • γ-Synuclein: seeding of α-synuclein aggregation and transmission between cells.

    abstract::Protein misfolding and aggregation is a ubiquitous phenomenon associated with a wide range of diseases. The synuclein family comprises three small naturally unfolded proteins implicated in neurodegenerative diseases and some forms of cancer. α-Synuclein is a soluble protein that forms toxic inclusions associated with ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi300478w

    authors: Surgucheva I,Sharov VS,Surguchov A

    更新日期:2012-06-12 00:00:00

  • Primary structure of human J chain: alignment of peptides from chemical and enzymatic hydrolyses.

    abstract::The primary structure of the J chain from a human Waldenströms IgM protein has been determined using a combination of automated and conventional Edman degradative procedures. Eighty-five percent of the sequence was established with peptides isolated from tryptic digests of carboxyamidomethylated and citraconylated J c...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00635a002

    authors: Mole JE,Bhown AS,Bennett JC

    更新日期:1977-08-09 00:00:00

  • Mechanism of flavin reduction in class 2 dihydroorotate dehydrogenases.

    abstract::Dihydroorotate dehydrogenases (DHODs) oxidize dihydroorotate (DHO) to orotate using the FMN prosthetic group to abstract a hydride equivalent from C6 and a protein residue (Ser for Class 2 DHODs) to deprotonate C5. The fundamental question of whether the scission of the two DHO C-H bonds is concerted or stepwise was a...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi060919g

    authors: Fagan RL,Nelson MN,Pagano PM,Palfey BA

    更新日期:2006-12-19 00:00:00