Abstract:
:Phase-sensitive 2D 1H/1H COSY spectra can be used to identify the structures of individual pure specimens of the aminoglycoside antibiotic amikacin and its N-hemisuccinyl derivatives. However, even at 500 MHz the 2D chemical shift dispersion does not allow for unambiguous assignment of all cross-peaks. By use of 2D relayed coherence transfer experiments (RELAY) optimized to detect two-step 1H/1H scalar interactions in which one of the J-values is small, sufficient additional correlations can be obtained from the frequency-isolated resonances to allow facile tracing of all scalar connectivities. Complete assignments of the 1H NMR spectra of amikacin, its 6'-N-hemisuccinamide, and a novel bis(acylate) [gamma-N-(p-vinylbenzoyl)amikacin 6'-N-hemisuccinamide] were obtained for aqueous media. The NMR spectrum of amikacin free base was also assigned in dimethyl sulfoxide solution. The RELAY experiment can be extended to the analysis of reaction mixtures, which allows for the identification and resonance assignment of regioisomeric amikacin haptens in the mixture state. All of the N-monohemisuccinyl isomers of amikacin have been identified in reaction mixtures through the RELAY experiment. The relative reactivities of the amino functions of amikacin toward acylating agents were found to be 6'-N greater than 3-N equal to or greater than 3"-N equal to or greater than gamma-N. However, this reactivity order is altered after the initial acylation event.
journal_name
Biochemistryjournal_title
Biochemistryauthors
Andersen NH,Eaton HL,Nguyen KT,Hartzell C,Nelson RJ,Priest JHdoi
10.1021/bi00408a019subject
Has Abstractpub_date
1988-04-19 00:00:00pages
2782-90issue
8eissn
0006-2960issn
1520-4995journal_volume
27pub_type
杂志文章相关文献
BIOCHEMISTRY文献大全abstract::Photosynthetic water oxidation takes place at the Mn4CaO5 cluster in photosystem II. Around the Mn4CaO5 cluster, a hydrogen bond network is formed by several water molecules, including four water ligands. To clarify the role of this water network in the mechanism of water oxidation, we investigated the effects of the ...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/acs.biochem.5b01120
更新日期:2016-01-26 00:00:00
abstract::Cdx and Hox gene families encode homeodomain-containing transcription factors involved in anterior-posterior vertebral patterning. Although Cdx proteins are direct transcriptional regulators of Hox gene expression, both Hox and Cdx proteins are known to interact with other homeodomain transcription factors, leading us...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi301241q
更新日期:2012-12-04 00:00:00
abstract::Two major neutral glyceroglucolipids (A and B) have been isolated from lipid extract of human gastric content by the procedure involving column fractionation on DEAE-Sephadex, silicic acid, and thin-layer chromatography. Both glycolipids contained glucose, glyceryl ethers, and fatty acids. The structures of these glyc...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00637a003
更新日期:1977-09-06 00:00:00
abstract::A photoaffinity probe for corticotropin (ACTH) receptors was prepared by selective modification of the single tryptophan residue in ACTH. A new photoreactive agent, 2,4-dinitro-5-azidophenylsulfenyl chloride, was synthesized and used for introducing the photoreactive group into ACTH. 2,4-Dinitro-5-azidophenylsulfenyl-...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00555a027
更新日期:1980-07-08 00:00:00
abstract::The stoichiometry of cytochrome b559 (one or two copies) per reaction center of photosystem II (PSII) has been the subject of considerable debate. The molar ratio of cytochrome b559 has a number of significant implications on our understanding of the functional role of cytochrome b559, the mechanism of electron donati...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00161a024
更新日期:1992-11-24 00:00:00
abstract::The synaptotagmin (Syt) family of proteins plays an important role in vesicle docking and fusion during Ca(2+)-induced exocytosis in a wide variety of cell types. Its role as a Ca(2+) sensor derives primarily from its two C2 domains, C2A and C2B, which insert into anionic lipid membranes upon binding Ca(2+). Syt isofo...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/acs.biochem.5b00421
更新日期:2015-09-22 00:00:00
abstract::We have studied carbon monoxide (CO) migration and binding in the nonsymbiotic hemoglobins AHb1 and AHb2 of Arabidopsis thaliana using Fourier transform infrared (FTIR) spectroscopy combined with temperature derivative spectroscopy (TDS) at cryogenic temperatures. Both proteins have similar amino acid sequences but di...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi100768g
更新日期:2010-09-07 00:00:00
abstract::Clostridial neurotoxins are zinc endopeptidases, and each contains one Zn(2+)/molecule. To investigate the structural/functional role of Zn(2+) in botulinum neurotoxin light chain (the enzymatic subunit of the neurotoxin), the effect of the removal of zinc on protein folding and enzyme kinetics was investigated. The a...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi0007472
更新日期:2000-08-29 00:00:00
abstract::The differential scanning calorimetry trace of F1ATPase, prepared from beef heart submitochondrial particles, has a single sharp endothermic transition at 80.5 +/- 1.0 degrees C and a half-height peak width of 2.0 +/- 0.2 degrees. The transition enthalpy is 19 +/- 2 cal/g of protein. Submitochondrial particles (SMP) h...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00328a022
更新日期:1985-03-26 00:00:00
abstract::The chromatin-associated high-mobility group (HMG) proteins of the plant HMGB family are characterized by a central HMG-box domain that is flanked by a basic N-terminal and an acidic C-terminal domain. By functional interaction with certain transcription factors, HMGB proteins contribute to transcriptional regulation....
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi6024947
更新日期:2007-05-29 00:00:00
abstract::The structure of the His-94-->Cys variant of human carbonic anhydrase II (CAII) has been determined by X-ray crystallographic methods to a resolution of 2.3 A with a final crystallographic R factor of 0.155. This variant of CAII crystallizes in orthorhombic space group P2(1)2(1)2(1) which is the first example of a new...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00057a015
更新日期:1993-02-16 00:00:00
abstract::Human lecithin:cholesterol acyltransferase (LCAT, E.C.2.3.1.43) is a serine-type esterase that contains six cysteines, two of which, Cys31 and Cys184, are free. The remaining cysteines form disulfide links. One of these is between Cys50 and Cys74 and the other is between Cys313 and Cys356. The cDNA of LCAT and mutants...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00063a021
更新日期:1993-03-30 00:00:00
abstract::Modified (Arg63-Ile64 reactive-site peptide bond hydrolyzed) soybean trypsin inhibitor (Kunitz) with all reactive amino groups, except that of Ile64, protected was described in the preceding paper (Kowalski, D., and Laskowski, M., Jr. (1976), Biochemistry, preceding paper in this issue). Treatment of this inhibitor wi...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00651a022
更新日期:1976-03-23 00:00:00
abstract::Covalent labeling of the canine renal parathyroid hormone receptor with [125I]bPTH(1-34) reveals several major binding components that display characteristics consistent with a physiologically relevant adenylate cyclase linked receptor. Through the use of the specific glycosidases neuraminidase and endoglycosidase F a...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00398a044
更新日期:1987-12-01 00:00:00
abstract::Two-dimensional mapping of the tryptic phosphopeptides generated following in vitro protein kinase C phosphorylation of the myosin heavy chain isolated from human platelets and chicken intestinal epithelial cells shows a single radioactive peptide. These peptides were found to comigrate, suggesting that they were iden...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00218a012
更新日期:1991-01-29 00:00:00
abstract::The actin cytoskeleton carries out cellular functions, including division, migration, adhesion, and intracellular transport, that require a variety of actin binding proteins, including myosins. Our focus here is on class II nonmuscle myosin isoforms, NMIIA, NMIIB, and NMIIC, and their regulation by the actin binding p...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi500162z
更新日期:2014-06-24 00:00:00
abstract::Porcine aortic myosin is a smooth muscle contractile protein similar to its striated muscle counterpart. Electrophoresis in sodium dodecyl sulfate indicates that the molecule consists of three classes of subunits with polypeptide chain molecular weights of 192,000, 19,000, and 15,000. At 277 nm the absorption spectrum...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00576a003
更新日期:1979-05-01 00:00:00
abstract::By using targeted disulfide cross-linking, we have characterized structural changes that the Escherichia coli aspartate receptor undergoes upon modification of the four specific residues that are reversibly methylated during sensory adaptation. Cysteine residues were introduced at specific positions either in the cyto...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi980343y
更新日期:1998-10-20 00:00:00
abstract::The unfolding and dissociation of the tetrameric enzyme fructose-1,6-bisphosphatase from pig kidney by guanidine hydrochloride have been investigated at equilibrium by monitoring enzyme activity, ANS binding, intrinsic (tyrosine) protein fluorescence, exposure of thiol groups, fluorescence of extrinsic probes (AEDANS,...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi034203m
更新日期:2003-06-17 00:00:00
abstract::Heme-regulated eIF2alpha kinase [heme-regulated inhibitor (HRI)] plays a critical role in the regulation of protein synthesis by heme iron. The kinase active site is located in the C-terminal domain, whereas the N-terminal domain is suggested to regulate catalysis in response to heme binding. Here, we found that the r...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi060556k
更新日期:2006-08-15 00:00:00
abstract::Analogues of tri- and tetrapeptide substrates of carboxypeptidase A in which the scissile peptide linkage is replaced with a phosphonate moiety (-PO2--O-) were synthesized and evaluated as inhibitors of the enzyme. The inhibitors terminated with either L-lactate or L-phenyllactate [designated (O) Ala and (O) Phe, resp...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00441a022
更新日期:1989-07-25 00:00:00
abstract::Classical molecular dynamics simulations were utilized to investigate the structural and dynamical properties of water in the active site of ketosteroid isomerase (KSI) to provide insight into the role of these water molecules in the enzyme-catalyzed reaction. This reaction is thought to proceed via a dienolate interm...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi200703y
更新日期:2011-08-09 00:00:00
abstract::A soluble extract prepared from cells of an Escherichia coli strain carrying the antibiotic resistance plasmid R6K is capable of carrying out the complete process of R6K DNA replication. DNA synthesis in vitro is dependent on the four deoxyribo- and ribonucleotide triphosphates and is sensitive to rifampin and strepto...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi00606a017
更新日期:1978-06-27 00:00:00
abstract::(+)-Delta-cadinene synthase (DCS) from Gossypium arboreum (tree cotton) is a sesquiterpene cyclase that catalyzes the cyclization of farnesyl diphosphate in the first committed step of the biosynthesis of gossypol, a phytoalexin that defends the plant from bacterial and fungal pathogens. Here, we report the X-ray crys...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi900483b
更新日期:2009-07-07 00:00:00
abstract::Photosensitized oxidation reactions damage tissue by catalyzing the formation of oxyradicals and singlet oxygen. beta-Carotene is hypothesized to exert photoprotective effects by quenching singlet oxygen formed by Type II reactions and by scavenging free radicals formed by Type I reactions. beta-Carotene antioxidant m...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi9708646
更新日期:1997-10-21 00:00:00
abstract::It is generally accepted that electron transfer in bacterial photosynthesis is driven by the first singlet excited state of a special pair of bacteriochlorophylls (P*). We have examined the first steps of electron transfer in a mutant of the Rhodobacter sphaeroides reaction center in which charge separation from P* is...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi9703756
更新日期:1997-06-10 00:00:00
abstract::In circulation the phospholipid transfer protein (PLTP) facilitates the transfer of phospholipid-rich surface components from postlipolytic chylomicrons and very low density lipoproteins (VLDL) to HDL and thereby regulates plasma HDL levels. To study the molecular mechanisms involved in PLTP-mediated lipid transfer, w...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi0621866
更新日期:2007-02-06 00:00:00
abstract::N-RAP is a recently discovered muscle-specific protein that is concentrated at the myotendon junctions in skeletal muscle and at the intercalated disks in cardiac muscle. The C-terminal half of N-RAP contains a region with sequence homology to nebulin, while a LIM domain is found at its N-terminus. N-RAP is hypothesiz...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi982395t
更新日期:1999-05-11 00:00:00
abstract::The human endonuclease III homologue (hNTH1) removes premutagenic cytosine damage from DNA. This includes 5-hydroxycytosine, which has increased potential for pairing with adenine, resulting in C --> T transition mutations. Here we report that hNTH1 acts on both 5-hydroxycytosine and abasic sites preferentially when t...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi0028901
更新日期:2001-06-05 00:00:00
abstract::S-Adenosylmethionine decarboxylase is a pyruvate-dependent enzyme. The enzyme forms a Schiff base with substrate, S-adenosylmethionine, through the pyruvoyl moiety. This facilitates the release of CO2 from the substrate, which must then be protonated on the alpha carbon in order to permit hydrolysis of the Schiff base...
journal_title:Biochemistry
pub_type: 杂志文章
doi:10.1021/bi9825201
更新日期:1999-02-23 00:00:00