Influence of the calcium-induced gel phase on the behavior of small molecules in phosphatidylserine and phosphatidylserine-phosphatidylcholine multilamellar vesicles.

Abstract:

:The behavior of fluorescent and spin-label probes is examined in several fluid and gel phospholipid phases, with particular focus on the Ca2+-induced gel phase in phosphatidylserine (PS). These probes have behavior characteristic of the type of probe and of the type of lipid environment. Anthroyloxy- and doxyl-labeled PS [12-AS-PS and (7,6)PS, respectively] exhibit greatly restricted and/or slow probe motion in Ca(PS)2, even compared to thermotropic gel-phase lipid at the same temperature. In contrast, anthroyloxy- and doxyl-labeled phosphatidylcholine (PC), as well as fluorescent-labeled and spin-labeled fatty acid derivatives, show no apparent change in probe motion in Ca(PS)2 compared to fluid lamellar lipid. Doxyl-labeled phosphatidic acid, phosphatidylethanolamine, and phosphatidylglycerol show restricted motion in Ca(PS)2 relative to fluid-phase lipid, but the electron paramagnetic resonance (EPR) spectra could not be interpreted in terms of simple models for probe ordering. The fluorescent probes diphenylhexatriene (DPH) and trans-parinaric acid methyl ester (tPNA-Me) show motional behavior in Ca(PS)2 that is intermediate between that observed in fluid and in thermotropic gel-phase lipid. When Ca(PS)2 and fluid PS/PC phases coexist, probe molecules distribute between the two phases. Experiments using fluorescence quenching by spin-labeled PC in PS/PC in excess Ca2+ yield the distribution of several fluorophore probes between fluid liquid-crystal and Ca(PS)2 gel phases, expressed as a concentration ratio, RLC/G. The value of RLC/G = 100 in favor of the fluid phase is obtained for 12-AS-PC, 18 for 12-AS-Me, 12 for DPH, 3 for tPnA-Me, and 1 for 12-AS-PS.(ABSTRACT TRUNCATED AT 250 WORDS)

journal_name

Biochemistry

journal_title

Biochemistry

authors

Florine KI,Feigenson GW

doi

10.1021/bi00380a039

subject

Has Abstract

pub_date

1987-03-24 00:00:00

pages

1757-68

issue

6

eissn

0006-2960

issn

1520-4995

journal_volume

26

pub_type

杂志文章
  • "Dilysine trigger" in transferrins probed by mutagenesis of lactoferrin: crystal structures of the R210G, R210E, and R210L mutants of human lactoferrin.

    abstract::The mammalian iron-binding proteins lactoferrin (Lf) and transferrin (Tf) bind iron very tightly, but reversibly. Despite homologous structures and essentially identical iron binding sites, Tf begins to release iron at pH 6.0, whereas Lf retains iron to pH approximately 3.5. This difference in iron retention gives the...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi020443a

    authors: Peterson NA,Arcus VL,Anderson BF,Tweedie JW,Jameson GB,Baker EN

    更新日期:2002-12-03 00:00:00

  • Multiple-ligand binding in CYP2A6: probing mechanisms of cytochrome P450 cooperativity by assessing substrate dynamics.

    abstract::The contribution of ligand dynamics to CYP allosterism has not been considered in detail. On the basis of a previous study, we hypothesized that CYP2A6 and CYP2E1 accommodate multiple xylene ligands. As a result, the intramolecular ( k H/ k D) obs values observed for some xylene isomers are expected to be dependent on...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi702020y

    authors: Harrelson JP,Atkins WM,Nelson SD

    更新日期:2008-03-04 00:00:00

  • RNA species that replicate with DNA-dependent RNA polymerase from Escherichia coli.

    abstract::An RNA that replicates with core RNA polymerase from E. coli and the substrates ATP, CTP, ITP, and UTP, was selected from a random poly(A,U,I,C) library and named EcorpI. Another replicating RNA, EcorpG, was obtained by template-free incubation of holo RNA polymerase and the substrates ATP, CTP, GTP, and UTP. Both RNA...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi002756g

    authors: Wettich A,Biebricher CK

    更新日期:2001-03-20 00:00:00

  • Characterization of the Photophysical, Thermodynamic, and Structural Properties of the Terbium(III)-DREAM Complex.

    abstract::DREAM (also known as K(+) channel interacting protein 3 and calsenilin) is a calcium binding protein and an active modulator of KV4 channels in neuronal cells as well as a novel Ca(2+)-regulated transcriptional modulator. DREAM has also been associated with the regulation of Alzheimer's disease through the prevention ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.6b00067

    authors: Gonzalez WG,Ramos V,Diaz M,Garabedian A,Molano-Arevalo JC,Fernandez-Lima F,Miksovska J

    更新日期:2016-03-29 00:00:00

  • Effects of substitutions of lysine and aspartic acid for asparagine at beta 108 and of tryptophan for valine at alpha 96 on the structural and functional properties of human normal adult hemoglobin: roles of alpha 1 beta 1 and alpha 1 beta 2 subunit inter

    abstract::Using our Escherichia coli expression system, we have produced five mutant recombinant (r) hemoglobins (Hbs): r Hb (alpha V96 W), r Hb Presbyterian (beta N108K), r Hb Yoshizuka (beta N108D), r Hb (alpha V96W, beta N108K), and r Hb (alpha V96W, beta N108D). These r Hbs allow us to investigate the effect on the structur...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi990286o

    authors: Tsai CH,Shen TJ,Ho NT,Ho C

    更新日期:1999-07-06 00:00:00

  • Mapping peptide hormone-receptor interactions using a disulfide-trapping approach.

    abstract::Efforts to elucidate the nature of the bimolecular interaction of parathyroid hormone (PTH) with its cognate receptor, the PTH receptor type 1 (PTHR1), have relied heavily on benzoylphenylalanine- (Bpa-) based photoaffinity cross-linking. However, given the flexibility, size, and shape of Bpa, the resolution at the PT...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi800122f

    authors: Monaghan P,Thomas BE,Woznica I,Wittelsberger A,Mierke DF,Rosenblatt M

    更新日期:2008-06-03 00:00:00

  • Infrared spectroscopy of polynucleotides in the carbonyl region in H2O solution: A.U systems.

    abstract::Strong absorbance of water at 1645 cm-1 has previously prevented dependable observation of infrared spectra of H2O solutions in the carbonyl region. We have obtained reliable spectra in pure water and in alcohol-water mixtures in this region and used them to study A.U polynucleotide interaction. Spectra in pure water ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00607a034

    authors: Miles HT,Frazier J

    更新日期:1978-07-11 00:00:00

  • Effects of certain 5'-substituted adenosines on polyamine synthesis: selective inhibitors of spermine synthase.

    abstract::A number of nucleosides related to S-adenosylmethionine were tested for their inhibitory action on three enzymes involved in the biosynthesis of polyamines. The particular objective of the experiments was to determine whether any of the compounds could be used as selective inhibitors of the synthesis of spermine by sp...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00362a016

    authors: Pegg AE,Coward JK,Talekar RR,Secrist JA 3rd

    更新日期:1986-07-15 00:00:00

  • Identification of N(G)-methylarginine residues in human heterogeneous RNP protein A1: Phe/Gly-Gly-Gly-Arg-Gly-Gly-Gly/Phe is a preferred recognition motif.

    abstract::Three sites of N(G),N(G)-arginine methylation have been located at residues 205, 217, and 224 in the glycine-rich, COOH-terminal one-third of the HeLa A1 heterogeneous ribonucleoprotein. Together with the previously determined dimethylated arginine at position 193 [Williams et al., (1985) Proc. Natl. Acad. Sci. U.S.A....

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9625509

    authors: Kim S,Merrill BM,Rajpurohit R,Kumar A,Stone KL,Papov VV,Schneiders JM,Szer W,Wilson SH,Paik WK,Williams KR

    更新日期:1997-04-29 00:00:00

  • Solution structure of the exocyclic 1,N2-propanodeoxyguanosine adduct opposite deoxyadenosine in a DNA nonamer duplex at pH 8.9. model of pH-dependent conformational transition.

    abstract::The solution structure of the complementary d(C1-A2-T3-G4-X5-G6-T7-A8-C9).d(G10-T11-A12-C13-A14-C15-A16-T17-G18) DNA duplex (designated X.A 9-mer), which contains a 1,N2-propanodeoxyguanosine exocyclic adduct X5 opposite deoxyadenosine A14 at the center, is pH dependent [Kouchakdjian, M., Eisenberg, M., Live, D., Mari...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00066a004

    authors: Huang P,Patel DJ,Eisenberg M

    更新日期:1993-04-20 00:00:00

  • Role of the carboxyl-terminal lectin domain in self-association of galectin-3.

    abstract::Galectin-3 is a member of a large family of beta-galactoside-binding animal lectins and is composed of a carboxyl-terminal lectin domain connected to an amino-terminal nonlectin part. Previous experimental results suggest that, when bound to multivalent glycoconjugates, galectin-3 self-associates through intermolecula...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi971409c

    authors: Yang RY,Hill PN,Hsu DK,Liu FT

    更新日期:1998-03-24 00:00:00

  • Kinetics of polymerization of a fluoresceinated derivative of complement protein C9 by the membrane-bound complex of complement proteins C5b-8.

    abstract::The fluorescence self-quenching by energy transfer of FITC-C9, a fluoresceinated derivative of human complement protein C9 [Sims, P.J. (1984) Biochemistry (preceding paper in this issue)], has been used to monitor the kinetics of C9 polymerization induced by the membrane-associated complex of complement proteins C5b-8...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00309a021

    authors: Sims PJ,Wiedmer T

    更新日期:1984-07-03 00:00:00

  • Acylation of myelin basic protein peptide 1-21 with alkyl carboxylates 2-10 carbons long affects secondary structure and posttranslational modification.

    abstract::A peptide consisting of the first 21 residues of human myelin basic protein (MBP) was synthesized. The N-terminal alanine of portions was blocked in separate experiments with alkyl carboxylates varying in size from 2 to 10 carbon atoms. The effects of these different alkyl carboxylates at the N-terminus on the seconda...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00180a008

    authors: Costentino M,Pritzker L,Boulias C,Moscarello MA

    更新日期:1994-04-12 00:00:00

  • Product dependence of deuterium isotope effects in enzyme-catalyzed reactions.

    abstract::Theory for enzyme-catalyzed reactions is developed for the dependence on product concentration of deuterium isotope effects on V and V/K. Generally, a product that decreases the off-rate for a second product to zero causes the isotope effect on V/K to decrease to DKeq and that on V to decrease to a value between 1 and...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00058a013

    authors: Cook PF,Yoon MY,Hara S,McClure GD Jr

    更新日期:1993-02-23 00:00:00

  • Sulfide binding properties of truncated hemoglobins.

    abstract::The truncated hemoglobins from Bacillus subtilis (Bs-trHb) and Thermobifida fusca (Tf-trHb) have been shown to form high-affinity complexes with hydrogen sulfide in their ferric state. The recombinant proteins, as extracted from Escherichia coli cells after overexpression, are indeed partially saturated with sulfide, ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi901671d

    authors: Nicoletti FP,Comandini A,Bonamore A,Boechi L,Boubeta FM,Feis A,Smulevich G,Boffi A

    更新日期:2010-03-16 00:00:00

  • A monoclonal antibody against brain calmodulin-dependent protein kinase type II detects putative conformational changes induced by Ca2+-calmodulin.

    abstract::A mouse monoclonal IgG1 antibody has been generated against the soluble form of the calmodulin-dependent protein kinase type II. This antibody recognizes both the soluble and cytoskeletal forms of the enzyme, requiring Ca2+ (EC50 = 20 microM) for the interaction. Other divalent cations such as Zn2+, Mn2+, Cd2+, Co2+, ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00417a060

    authors: LeVine H 3rd,Su JL,Sahyoun NE

    更新日期:1988-08-23 00:00:00

  • Comparison of isotope labeling patterns of purines in three specific transfer RNAs.

    abstract::Purine C-8 tritium-labeling rates have been measured at specific sites in Escherichia coli tRNAIle and tRNA2Tyr. The results are compared with those obtained for yeast tRNAPhe (preceding paper(Gamble et al., 1976)). The tRNAIle and tRNAPhe fall into the same general class of tRNA structures, while tRNA2Tyr is in a dif...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00658a015

    authors: Schoemaker HJ,Gamble RC

    更新日期:1976-06-29 00:00:00

  • Isolation and characterization of rat pancreatic elastase.

    abstract::Proelastase has been purified to homogeneity from rat pancreatic tissue by a combination of CM-Sephadex and immobilized protease inhibitor affinity resins. Trypsin activation yields an elastolytic enzyme that possesses a specificity toward small hydrophobic residues in synthetic amide substrates, similar to those of p...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00285a008

    authors: Largman C

    更新日期:1983-08-02 00:00:00

  • The substrate binding site of human liver cytochrome P450 2C9: an approach using designed tienilic acid derivatives and molecular modeling.

    abstract::Biochemical experiments, using the well-defined human liver CYP2C9 expressed in yeast, and molecular modeling techniques were used to derive a predictive model for substrates of CYP2C9. The ability of 10 2-aroylthiophenes related to tienilic acid to act as substrates for CYP2C9 was studied. Four of them were original ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00033a007

    authors: Mancy A,Broto P,Dijols S,Dansette PM,Mansuy D

    更新日期:1995-08-22 00:00:00

  • Engineering protein stability and specificity using fluorous amino acids: the importance of packing effects.

    abstract::The incorporation of extensively fluorinated, or fluorous, analogues of hydrophobic amino acids into proteins potentially provides the opportunity to modulate the physicochemical properties of proteins in a predictable manner. On the basis of the properties of small fluorocarbon molecules, extensively fluorinated prot...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi901481k

    authors: Buer BC,de la Salud-Bea R,Al Hashimi HM,Marsh EN

    更新日期:2009-11-17 00:00:00

  • Pyrrolopyridine derivatives from pyridoxal 5'-sulfate.

    abstract::A fluorescent derivative of lysine-258 isolated from the active site of aspartate aminotransferase modified by treatment of the apoenzyme with pyridoxal 5'-sulfate has been characterized as a substituted 2H-pyrrolo[3,4-c]pyridine. Similar pyrrolopyridines are produced in up to 20% yield by reaction of pyridoxal sulfat...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00264a016

    authors: Scott RD,Ueno H,Metzler DE

    更新日期:1982-10-12 00:00:00

  • Internal architecture of the core nucleosome: fluorescence energy transfer studies at methionine-84 of histone H4.

    abstract::Chicken histone H4, labeled separately at Met-84 with N-[[(iodoacetyl)amino]ethyl]-5-naphthylamine-1-sulfonic acid and 5-(iodoacetamido)fluorescein, was reassociated with unlabeled histones H2A, H2B, and H3 and 146 base pairs of DNA to produce fluorescently labeled nucleosomes having physical characteristics virtually...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00366a010

    authors: Chung DG,Lewis PN

    更新日期:1986-09-09 00:00:00

  • X-ray absorption spectroscopy comparison of the active site structures of Phanerochaete chrysosporium lignin peroxidase isoenzymes H2, H3, H4, H5, H8, and H10.

    abstract::The iron heme and its immediate environment can provide information that is pivotal to our understanding of the structural and mechanistic features that confer unusual properties to the heme peroxidases. X-ray absorption spectroscopy (XAS), which is ideally suited for the investigation of the local environment and ele...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00040a032

    authors: Sinclair R,Copeland B,Yamazaki I,Powers L

    更新日期:1995-10-10 00:00:00

  • In vitro phosphinate methylation by PhpK from Kitasatospora phosalacinea.

    abstract::Radical S-adenosyl-L-methionine, cobalamin-dependent methyltransferases have been proposed to catalyze the methylations of unreactive carbon or phosphorus atoms in antibiotic biosynthetic pathways. To date, none of these enzymes has been purified or shown to be active in vitro. Here we demonstrate the activity of the ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi201220r

    authors: Werner WJ,Allen KD,Hu K,Helms GL,Chen BS,Wang SC

    更新日期:2011-10-25 00:00:00

  • Functional comparison of two human monocyte chemotactic protein-2 isoforms, role of the amino-terminal pyroglutamic acid and processing by CD26/dipeptidyl peptidase IV.

    abstract::Human Monocyte Chemotactic Protein (MCP)-2 has originally been isolated from stimulated osteosarcoma cells as a chemokine coproduced with MCP-1 and MCP-3. Here, a 5'-end extended MCP-2 cDNA was cloned from a human testis cDNA library. It encoded a 76 residue MCP-2 protein, but differed from the reported bone marrow-de...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi980497d

    authors: Van Coillie E,Proost P,Van Aelst I,Struyf S,Polfliet M,De Meester I,Harvey DJ,Van Damme J,Opdenakker G

    更新日期:1998-09-08 00:00:00

  • Folding of an unfolded protein by macromolecular crowding in vitro.

    abstract::Protein folding in vivo takes place in a highly crowded environment. The resulting excluded volume forces are thought to stabilize folded forms of proteins. In agreement, many in vitro studies have shown that the presence of macromolecular crowding agents increases the stability of folded proteins but often by only a ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi500222g

    authors: Adén J,Wittung-Stafshede P

    更新日期:2014-04-15 00:00:00

  • Modification of ribonuclease T1 specificity by random mutagenesis of the substrate binding segment.

    abstract::Attempts to modify the guanine specificity of ribonuclease T1 (RNase T1) by rationally designed amino acid substitutions failed so far. Therefore, we applied a semirational approach by randomizing the guanine binding site. A combinatorial library of approximately 1.6 million RNase T1 variants containing permutations o...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9817515

    authors: Hubner B,Haensler M,Hahn U

    更新日期:1999-01-26 00:00:00

  • Dimorphism in bile salt/lecithin mixed micelles.

    abstract::We investigated the dependence of certain properties of bile salt/lecithin mixed micelles on the molar ratio of the two components. UV absorption suggested that the micellar system is fundamentally altered on passing through a bile salt:lecithin molar ratio of 1.8:1. Differential scanning calorimetry confirmed this tr...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00505a029

    authors: Claffey WJ,Holzbach RT

    更新日期:1981-01-20 00:00:00

  • Endogenous 5-methylcytosine protects neighboring guanines from N7 and O6-methylation and O6-pyridyloxobutylation by the tobacco carcinogen 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone.

    abstract::All CG dinucleotides along exons 5-8 of the p53 tumor suppressor gene contain endogenous 5-methylcytosine (MeC). These same sites (e.g., codons 157, 158, 245, 248, and 273) are mutational hot spots in smoking-induced lung cancer. Several groups used the UvrABC endonuclease incision assay to demonstrate that methylated...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi035259j

    authors: Ziegel R,Shallop A,Upadhyaya P,Jones R,Tretyakova N

    更新日期:2004-01-20 00:00:00

  • Structural symmetry: the three-dimensional structure of Haemophilus influenzae diaminopimelate epimerase.

    abstract::The Haemophilus influenzae diaminopimelate epimerase was cloned, expressed, purified, and crystallized in the C2221 space group (a = 102.1 A, b = 115.4 A, c = 66.3 A, alpha = beta = gamma = 90 degrees). The three-dimensional structure was solved to 2.7 A using a single Pt derivative and the Se-Met-substituted enzyme t...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi982138o

    authors: Cirilli M,Zheng R,Scapin G,Blanchard JS

    更新日期:1998-11-24 00:00:00