Functional characterization of oscillatory and excitable media.

Abstract:

:Cardiac and neural systems share common features of intrinsic oscillation in some cells as well as the ability to propagate excitation. One theoretical approach to study such systems is to develop realistic models for the tissue. This involves first developing detailed ionic "Hodgkin-Huxley"-type models of individual cells and then connecting the individual cells via synaptic and gap junctions in realistic geometries. An alternative approach is to characterize tissue in terms of functional properties such as phase resetting curves and restitution curves. Using simple models based on one-dimensional difference equations, the measured functional curves can be used to predict, analyze, and interpret nonlinear dynamical phenomena. This approach offers the prospects of providing simplified descriptions that offer insight into the experimental and clinical cardiac dynamics.

journal_name

Bull Math Biol

authors

Glass L,Shrier A

doi

10.1007/s11538-014-0015-y

subject

Has Abstract

pub_date

2015-05-01 00:00:00

pages

782-95

issue

5

eissn

0092-8240

issn

1522-9602

journal_volume

77

pub_type

杂志文章
  • Identifiability and Reconstructibility of Species Phylogenies Under a Modified Coalescent.

    abstract::Coalescent models of evolution account for incomplete lineage sorting by specifying a species tree parameter which determines a distribution on gene trees, and consequently, a site pattern probability distribution. It has been shown that the unrooted topology of the species tree parameter of the multispecies coalescen...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-018-0456-9

    authors: Long C,Kubatko L

    更新日期:2019-02-01 00:00:00

  • Fitting a structured juvenile-adult model for green tree frogs to population estimates from capture-mark-recapture field data.

    abstract::We derive point and interval estimates for an urban population of green tree frogs (Hyla cinerea) from capture-mark-recapture field data obtained during the years 2006-2009. We present an infinite-dimensional least-squares approach which compares a mathematical population model to the statistical population estimates ...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-011-9682-0

    authors: Ackleh AS,Carter J,Deng K,Huang Q,Pal N,Yang X

    更新日期:2012-03-01 00:00:00

  • The effect of polar lipids on tear film dynamics.

    abstract::In this paper, we present a mathematical model describing the effect of polar lipids, excreted by glands in the eyelid and present on the surface of the tear film, on the evolution of a pre-corneal tear film. We aim to explain the interesting experimentally observed phenomenon that the tear film continues to move upwa...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-010-9555-y

    authors: Aydemir E,Breward CJ,Witelski TP

    更新日期:2011-06-01 00:00:00

  • Resetting behavior in a model of bursting in secretory pituitary cells: distinguishing plateaus from pseudo-plateaus.

    abstract::We study a recently discovered class of models for plateau bursting, inspired by models for endocrine pituitary cells. In contrast to classical models for fold-homoclinic (square-wave) bursting, the spikes of the active phase are not supported by limit cycles of the frozen fast subsystem, but are transient oscillation...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-007-9241-x

    authors: Stern JV,Osinga HM,LeBeau A,Sherman A

    更新日期:2008-01-01 00:00:00

  • A Model for Interstitial Drainage Through a Sliding Lymphatic Valve.

    abstract::This study investigates fluid flow and elastic deformation in tissues that are drained by the primary lymphatic system. A model is formulated based on the Rossi hypothesis that states that the primary lymphatic valves, which are formed by overlapping endothelial cells around the circumferential lining of lymphatic cap...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-015-0078-4

    authors: Heppell C,Roose T,Richardson G

    更新日期:2015-06-01 00:00:00

  • B7-h1 and a mathematical model for cytotoxic T cell and tumor cell interaction.

    abstract::The surface protein B7-H1, also called PD-L1 and CD274, is found on carcinomas of the lung, ovary, colon, and melanomas but not on most normal tissues. B7-H1 has been experimentally determined to be an antiapoptotic receptor on cancer cells, where B7-H1-positive cancer cells have been shown to be immune resistant, and...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-011-9665-1

    authors: Galante A,Tamada K,Levy D

    更新日期:2012-01-01 00:00:00

  • Mathematical Models for Immunology: Current State of the Art and Future Research Directions.

    abstract::The advances in genetics and biochemistry that have taken place over the last 10 years led to significant advances in experimental and clinical immunology. In turn, this has led to the development of new mathematical models to investigate qualitatively and quantitatively various open questions in immunology. In this s...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章,评审

    doi:10.1007/s11538-016-0214-9

    authors: Eftimie R,Gillard JJ,Cantrell DA

    更新日期:2016-10-01 00:00:00

  • Fire-diffuse-fire calcium waves in confined intracellular spaces.

    abstract::The propagation of fire-diffuse-fire Ca(2+) waves through a three-dimensional rectangular domain is considered. The domain is infinite in extent in the direction of propagation but with lateral barriers to diffusion which contain Ca(2+) pumps. The Ca(2+) concentration profile due to the firing of a release site (spark...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1016/S0092-8240(03)00074-0

    authors: Lemon G

    更新日期:2004-01-01 00:00:00

  • Discussion: the Kermack-McKendrick epidemic threshold theorem.

    abstract::The paper reviews the work of Kermack and McKendrick on the development of simple mathematical models of the transmission dynamics of viral and bacterial infectious agents within population of hosts. The focus of attention is centred on the notion of a threshold density of susceptible hosts to trigger an epidemic and ...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章,评审

    doi:10.1016/s0092-8240(05)80039-4

    authors: Anderson RM

    更新日期:1991-01-01 00:00:00

  • A Stochastic Model for Reproductive Isolation Under Asymmetrical Mating Preferences.

    abstract::More and more evidence shows that mating preference is a mechanism that may lead to a reproductive isolation event. In this paper, a haploid population living on two patches linked by migration is considered. Individuals are ecologically and demographically neutral on the space and differ only on a trait, a or A, affe...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-018-0479-2

    authors: Leman H

    更新日期:2018-09-01 00:00:00

  • A community model of ciliate Tetrahymena and bacteria E coli: Part II. interactions in a batch system.

    abstract::Premised on relatively simple assumptions, mathematical models like those of Monod, Pirt or Droop inadequately explain the complex transient behavior of microbial populations. In particular, these models fail to explain many aspects of the dynamics of a Tetrahymena pyriformis-Escherichia coli community. In this study ...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/BF02458309

    authors: Jaworska JS,Hallam TG,Schultz TW

    更新日期:1996-03-01 00:00:00

  • Computational experiments support a competitive function in the CA3 region of the hippocampus.

    abstract::The comprehension of activities and functions of complex brain structures requires, among other things, information on simultaneous activities in several regions. Results reported in the literature using multi(micro/macro)electrode recordings or imaging techniques provide incomplete information due either to the small...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1006/bulm.1997.0032

    authors: Ventriglia F

    更新日期:1998-03-01 00:00:00

  • Mathematical insights in evaluating state dependent effectiveness of HIV prevention interventions.

    abstract::Mathematical models have been used to simulate HIV transmission and to study the use of preexposure prophylaxis (PrEP) for HIV prevention. Often a single intervention outcome over 10 years has been used to evaluate the effectiveness of PrEP interventions. However, different metrics express a wide variation over time a...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-013-9824-7

    authors: Zhao Y,Dimitrov DT,Liu H,Kuang Y

    更新日期:2013-04-01 00:00:00

  • Comparative kinetics of embryo development.

    abstract::A model of embryo energetics was fitted to data from the literature for species as different as snails and mammals. The model is based on assumptions about energy uptake, storage and utilization. It describes the animal by two state variables: volume and energy storage. Embryo weight is taken to be proportional to vol...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/BF02460653

    authors: Zonneveld C,Kooijman SA

    更新日期:1993-05-01 00:00:00

  • On Nonlinear Pest/Vector Control via the Sterile Insect Technique: Impact of Residual Fertility.

    abstract::We consider a minimalist model for the Sterile Insect Technique (SIT), assuming that residual fertility can occur in the sterile male population. Taking into account that we are able to get regular measurements from the biological system along the control duration, such as the size of the wild insect population, we st...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-020-00790-3

    authors: Aronna MS,Dumont Y

    更新日期:2020-08-09 00:00:00

  • Diffusion limited immunochemical sensing.

    abstract::The time-dependent surface coverage of antigen-antibody complexes for a sensor in which antigens are bound to surface immobilized antibodies is determined analytically. Assuming a reversible first order reaction between the antigens and antibodies, a model is derived describing the dynamical response of the sensor. Th...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/BF02460114

    authors: Geurts BJ

    更新日期:1989-01-01 00:00:00

  • An algebraic approach to signaling cascades with N layers.

    abstract::Posttranslational modification of proteins is key in transmission of signals in cells. Many signaling pathways contain several layers of modification cycles that mediate and change the signal through the pathway. Here, we study a simple signaling cascade consisting of n layers of modification cycles such that the modi...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-011-9658-0

    authors: Feliu E,Knudsen M,Andersen LN,Wiuf C

    更新日期:2012-01-01 00:00:00

  • Modelling directional guidance and motility regulation in cell migration.

    abstract::Although cell migration is an essential process in development, how cells reach their final destination is not well understood. Secreted molecules are known to have a migratory effect, but it remains unclear whether such molecules act as directional guidance cues or as motility regulators. There is potential to use si...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-005-9028-x

    authors: Cai AQ,Landman KA,Hughes BD

    更新日期:2006-01-01 00:00:00

  • Mechanical-statistical modeling in ecology: from outbreak detections to pest dynamics.

    abstract::Knowledge about large-scale and long-term dynamics of (natural) populations is required to assess the efficiency of control strategies, the potential for long-term persistence, and the adaptability to global changes such as habitat fragmentation and global warming. For most natural populations, such as pest population...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-008-9363-9

    authors: Soubeyrand S,Neuvonen S,Penttinen A

    更新日期:2009-02-01 00:00:00

  • On cloning and clone libraries for finite and infinite length genomes.

    abstract::This paper develops mathematical theory to determine the representativeness of clone libraries for various models, defined below in the text. In particular, the means and variances of fragment lengths and the mean of the length of a randomly selected fragment are determined, as well as the probability of the event tha...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1006/bulm.2001.0251

    authors: Fang Y,Wilson SR

    更新日期:2001-09-01 00:00:00

  • On the long-term fitness of cells in periodically switching environments.

    abstract::Because all the cell populations are capable of making switches between different genetic expression states in response to the environmental change, Thattai and van Oudenaarden (Genetics 167, 523-530, 2004) have raised a very interesting question: In a constantly fluctuating environment, which type of cell population ...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-007-9250-9

    authors: Pang NN,Tzeng WJ

    更新日期:2008-01-01 00:00:00

  • Simple stochastic fingerprints towards mathematical modeling in biology and medicine 2. Unifying Markov model for drugs side effects.

    abstract::Most of present mathematical models for biological activity consider just the molecular structure. In the present article we pretend extending the use of Markov chain models to define novel molecular descriptors, which consider in addition other parameters like target site or biological effect. Specifically, this math...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-005-9013-4

    authors: Cruz-Monteagudo M,González-Díaz H,Uriarte E

    更新日期:2006-10-01 00:00:00

  • Ligand Binding Dynamics for Pre-dimerised G Protein-Coupled Receptor Homodimers: Linear Models and Analytical Solutions.

    abstract::Evidence suggests that many G protein-coupled receptors (GPCRs) are bound together forming dimers. The implications of dimerisation for cellular signalling outcomes, and ultimately drug discovery and therapeutics, remain unclear. Consideration of ligand binding and signalling via receptor dimers is therefore required ...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-017-0387-x

    authors: White C,Bridge LJ

    更新日期:2019-09-01 00:00:00

  • Dynamics and management of stage-structured fish stocks.

    abstract::With increasing fishing pressures having brought several stocks to the brink of collapse, there is a need for developing efficient harvesting methods that account for factors beyond merely yield or profit. We consider the dynamics and management of a stage-structured fish stock. Our work is based on a consumer-resourc...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-012-9789-y

    authors: Meng X,Lundström NL,Bodin M,Brännström Å

    更新日期:2013-01-01 00:00:00

  • A Non-local Cross-Diffusion Model of Population Dynamics I: Emergent Spatial and Spatiotemporal Patterns.

    abstract::We extend a spatially non-local cross-diffusion model of aggregation between multiple species with directed motion toward resource gradients to include many species and more general kinds of dispersal. We first consider diffusive instabilities, determining that for directed motion along fecundity gradients, the model ...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-020-00786-z

    authors: Taylor NP,Kim H,Krause AL,Van Gorder RA

    更新日期:2020-08-11 00:00:00

  • Circular Tessera Codes in the Evolution of the Genetic Code.

    abstract::The origin of the modern genetic code and the mechanisms that have contributed to its present form raise many questions. The main goal of this work is to test two hypotheses concerning the development of the genetic code for their compatibility and complementarity and see if they could benefit from each other. On the ...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-020-00724-z

    authors: Fimmel E,Starman M,Strüngmann L

    更新日期:2020-04-04 00:00:00

  • Temporal profile of gene transcription noise modulated by cross-talking signal transduction pathways.

    abstract::Gene transcription is a central cellular process and is stochastic in nature. The stochasticity has been studied in real cells and in theory, but often for the transcription activated by a single signaling pathway at steady-state. As transcription of many genes is involved with multiple pathways, we investigate how th...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-011-9683-z

    authors: Sun Q,Tang M,Yu J

    更新日期:2012-02-01 00:00:00

  • A Growth-Fragmentation Approach for Modeling Microtubule Dynamic Instability.

    abstract::Microtubules (MTs) are protein filaments found in all eukaryotic cells which are crucial for many cellular processes including cell movement, cell differentiation, and cell division. Due to their role in cell division, they are often used as targets for chemotherapy drugs used in cancer treatment. Experimental studies...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-018-0531-2

    authors: Honoré S,Hubert F,Tournus M,White D

    更新日期:2019-03-01 00:00:00

  • Inferring the dynamics of a spatial epidemic from time-series data.

    abstract::Spatial interactions are key determinants in the dynamics of many epidemiological and ecological systems; therefore it is important to use spatio-temporal models to estimate essential parameters. However, spatially-explicit data sets are rarely available; moreover, fitting spatially-explicit models to such data can be...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1016/j.bulm.2003.09.002

    authors: Filipe JA,Otten W,Gibson GJ,Gilligan CA

    更新日期:2004-03-01 00:00:00

  • Representation of Multiple Cellular Phenotypes Within Tissue-Level Simulations of Cardiac Electrophysiology.

    abstract::Distinct electrophysiological phenotypes are exhibited by biological cells that have differentiated into particular cell types. The usual approach when simulating the cardiac electrophysiology of tissue that includes different cell types is to model the different cell types as occupying spatially distinct yet coupled ...

    journal_title:Bulletin of mathematical biology

    pub_type: 杂志文章

    doi:10.1007/s11538-018-0516-1

    authors: Bowler LA,Gavaghan DJ,Mirams GR,Whiteley JP

    更新日期:2019-01-01 00:00:00