On cloning and clone libraries for finite and infinite length genomes.

abstract：:We study the global stability of a class of models for in-vivo virus dynamics that take into account the Cytotoxic T Lymphocyte immune response and display antigenic variation. This class includes a number of models that have been extensively used to model HIV dynamics. We show that models in this class are globally a...

journal_title：Bulletin of mathematical biology

authors： Souza MO,Zubelli JP

更新日期：2011-03-01 00:00:00

abstract：:Bovine Babesiosis (BB) is a tick borne parasitic disease with worldwide over 1.3 billion bovines at potential risk of being infected. The disease, also called tick fever, causes significant mortality from infection by the protozoa upon exposure to infected ticks. An important factor in the spread of the disease is the...

journal_title：Bulletin of mathematical biology

authors： Friedman A,Yakubu AA

更新日期：2014-01-01 00:00:00

abstract：:Chemical reactions are discrete, stochastic events. As such, the species' molecular numbers can be described by an associated master equation. However, handling such an equation may become difficult due to the large size of reaction networks. A commonly used approach to forecast the behaviour of reaction networks is t...

journal_title：Bulletin of mathematical biology

authors： López-Caamal F,Marquez-Lago TT

更新日期：2014-09-01 00:00:00

abstract：:This study is concerned with reconciling theoretical modelling of the fluid flow in the airway surface liquid with experimental visualisation of tracer transport in human airway epithelial cultures. The airways are covered by a dense mat of cilia of length approximately 6 microm beating in a watery periciliary liquid ...

journal_title：Bulletin of mathematical biology

authors： Smith DJ,Gaffney EA,Blake JR

更新日期：2007-04-01 00:00:00

abstract：:We study a recently discovered class of models for plateau bursting, inspired by models for endocrine pituitary cells. In contrast to classical models for fold-homoclinic (square-wave) bursting, the spikes of the active phase are not supported by limit cycles of the frozen fast subsystem, but are transient oscillation...

journal_title：Bulletin of mathematical biology

authors： Stern JV,Osinga HM,LeBeau A,Sherman A

更新日期：2008-01-01 00:00:00

abstract：:The surface protein B7-H1, also called PD-L1 and CD274, is found on carcinomas of the lung, ovary, colon, and melanomas but not on most normal tissues. B7-H1 has been experimentally determined to be an antiapoptotic receptor on cancer cells, where B7-H1-positive cancer cells have been shown to be immune resistant, and...

journal_title：Bulletin of mathematical biology

authors： Galante A,Tamada K,Levy D

更新日期：2012-01-01 00:00:00

abstract：:Collective dynamics of migrating cell populations drive key processes in tissue formation and maintenance under normal and diseased conditions. Collective cell behavior at the tissue level is typically characterized by considering cell density patterns such as clusters and moving cell fronts. However, there are also i...

journal_title：Bulletin of mathematical biology

authors： Mente C,Voss-Böhme A,Deutsch A

更新日期：2015-04-01 00:00:00

abstract：:Bacterial quorum sensing (QS) is a form of intercellular communication that relies on the production and detection of diffusive signaling molecules called autoinducers. Such a mechanism allows the bacteria to track their cell density in order to regulate group behavior, such as biofilm formation and bioluminescence. I...

journal_title：Bulletin of mathematical biology

authors： Fan G,Bressloff PC

更新日期：2019-05-01 00:00:00

abstract：:Modellers of large-scale genome rearrangement events, in which segments of DNA are inverted, moved, swapped, or even inserted or deleted, have found a natural syntax in the language of permutations. Despite this, there has been a wide range of modelling choices, assumptions and interpretations that make navigating the...

journal_title：Bulletin of mathematical biology

authors： Bhatia S,Feijão P,Francis AR

更新日期：2018-12-01 00:00:00

abstract：:Analysis schemes for the classification of synergism and antagonism for mixed agents operate on the discrepancies between observed and calculated results. As such they cannot be confirmed by experiments and therefore have to be tested in terms of mathematical and logical self-consistency. The concept of independent ac...

journal_title：Bulletin of mathematical biology

authors： Lam GK

更新日期：1994-09-01 00:00:00

abstract：:In order to understand the role of space in ecological communities where each species produces a certain type of resource and has varying abilities to exploit the resources produced by its own species and by the other species, we carry out a comparative study of an interacting particle system and its mean-field approx...

journal_title：Bulletin of mathematical biology

authors： Kang Y,Lanchier N

更新日期：2012-01-01 00:00:00

abstract：:In phylogenetics, a common strategy used to construct an evolutionary tree for a set of species [Formula: see text] is to search in the space of all such trees for one that optimizes some given score function (such as the minimum evolution, parsimony or likelihood score). As this can be computationally intensive, it w...

journal_title：Bulletin of mathematical biology

authors： Bastkowski S,Moulton V,Spillner A,Wu T

更新日期：2015-01-01 00:00:00

abstract：:The origin of the modern genetic code and the mechanisms that have contributed to its present form raise many questions. The main goal of this work is to test two hypotheses concerning the development of the genetic code for their compatibility and complementarity and see if they could benefit from each other. On the ...

journal_title：Bulletin of mathematical biology

authors： Fimmel E,Starman M,Strüngmann L

更新日期：2020-04-04 00:00:00

abstract：:Most of present mathematical models for biological activity consider just the molecular structure. In the present article we pretend extending the use of Markov chain models to define novel molecular descriptors, which consider in addition other parameters like target site or biological effect. Specifically, this math...

journal_title：Bulletin of mathematical biology

authors： Cruz-Monteagudo M,González-Díaz H,Uriarte E

更新日期：2006-10-01 00:00:00

abstract：:A rather complete model of the gluconeogenic pathway was used, with the known separate pools of mitochondrial and cytosolic oxalacetate, malate and aspartate. The fumarase, malate dehydrogenase and glutamate oxalacetate transaminase reactions were assumed to be isotopically actively reversible, but none at isotopic eq...

journal_title：Bulletin of mathematical biology

authors： Rognstad R

更新日期：1995-07-01 00:00:00

abstract：:We present a multi-scale computer simulator of cancer progression at the tumoral level, from avascular stage growth, through the transition from avascular to vascular growth (neo-vascularization), and into the later stages of growth and invasion of normal tissue. We use continuum scale reaction-diffusion equations for...

journal_title：Bulletin of mathematical biology

authors： Zheng X,Wise SM,Cristini V

更新日期：2005-03-01 00:00:00

abstract：:Integrins mediate cell adhesion and are essential receptors for the development and functioning of multicellular organisms. Integrin activation is known to require both ligand and talin binding and to correlate with cluster formation but the activation mechanism and precise roles of these processes are not yet resolve...

journal_title：Bulletin of mathematical biology

authors： Iber D,Campbell ID

更新日期：2006-05-01 00:00:00

abstract：:This paper considers a model of foodwebs taking into account species extinction and invasion. We show that system stability depends not only on usual parameters (mortality rates, self-limitation coefficients, and resource abundances), but also on an additional parameter ("biodiversity potential"). The main result is a...

journal_title：Bulletin of mathematical biology

authors： Kozlov V,Vakulenko S,Wennergren U

更新日期：2016-11-01 00:00:00

abstract：:Cardiac and neural systems share common features of intrinsic oscillation in some cells as well as the ability to propagate excitation. One theoretical approach to study such systems is to develop realistic models for the tissue. This involves first developing detailed ionic "Hodgkin-Huxley"-type models of individual ...

journal_title：Bulletin of mathematical biology

authors： Glass L,Shrier A

更新日期：2015-05-01 00:00:00

abstract：:Nosocomial outbreaks of bacteria are well documented. Based on these incidents, and the heavy usage of antibiotics in hospitals, it has been assumed that antibiotic resistance evolves in hospital environments. To test this assumption, we studied resistance phenotypes of bacteria collected from patient isolates at a co...

journal_title：Bulletin of mathematical biology

authors： Seigal A,Mira P,Sturmfels B,Barlow M

更新日期：2017-01-01 00:00:00

abstract：:The feedback dynamics from mosquito to human and back to mosquito involve considerable time delays due to the incubation periods of the parasites. In this paper, taking explicit account of the incubation periods of parasites within the human and the mosquito, we first propose a delayed Ross-Macdonald model. Then we ca...

journal_title：Bulletin of mathematical biology

authors： Ruan S,Xiao D,Beier JC

更新日期：2008-05-01 00:00:00

abstract：:In this paper, we present a mathematical model describing the effect of polar lipids, excreted by glands in the eyelid and present on the surface of the tear film, on the evolution of a pre-corneal tear film. We aim to explain the interesting experimentally observed phenomenon that the tear film continues to move upwa...

journal_title：Bulletin of mathematical biology

authors： Aydemir E,Breward CJ,Witelski TP

更新日期：2011-06-01 00:00:00

abstract：:It is widely believed that the slowest dispersal strategy is selected in the evolutional if the environment is temporally invariant but spatially heterogeneous. Authors claim in this paper that this belief is true only if random dispersals with constant motility are considered. However, if a dispersal strategy with fi...

journal_title：Bulletin of mathematical biology

authors： Kim YJ,Kwon O,Li F

更新日期：2013-12-01 00:00:00

abstract：:Because all the cell populations are capable of making switches between different genetic expression states in response to the environmental change, Thattai and van Oudenaarden (Genetics 167, 523-530, 2004) have raised a very interesting question: In a constantly fluctuating environment, which type of cell population ...

journal_title：Bulletin of mathematical biology

authors： Pang NN,Tzeng WJ

更新日期：2008-01-01 00:00:00

abstract：:Viruses that infect bacteria, i.e., bacteriophage or 'phage,' are increasingly considered as treatment options for the control and clearance of bacterial infections, particularly as compassionate use therapy for multi-drug-resistant infections. In practice, clinical use of phage often involves the application of multi...

journal_title：Bulletin of mathematical biology

authors： Li G,Leung CY,Wardi Y,Debarbieux L,Weitz JS

更新日期：2020-06-12 00:00:00

abstract：:A braced framework of tubular struts, in the walls and air spaces of frog lungs, suspends the respiratory surface and holds the lung open at zero transmural pressure withstanding imploding forces created by abdominal viscera, much as would the supports of a bell tent. The struts are tubes, having a larger second momen...

journal_title：Bulletin of mathematical biology

authors： Lawry J

更新日期：1999-07-01 00:00:00

abstract：:Population management using artificial gene drives (alleles biasing inheritance, increasing their own transmission to offspring) is becoming a realistic possibility with the development of CRISPR-Cas genetic engineering. A gene drive may, however, have to be stopped. "Antidotes" (brakes) have been suggested, but have ...

journal_title：Bulletin of mathematical biology

authors： Girardin L,Calvez V,Débarre F

更新日期：2019-12-01 00:00:00

abstract：:We investigate the existence of oscillatory dynamics and multiple steady-state flow rates in a network with a simple topology and in vivo microvascular blood flow constitutive laws. Unlike many previous analytic studies, we employ the most biologically relevant models of the physical properties of whole blood. Through...

journal_title：Bulletin of mathematical biology

authors： Karst NJ,Storey BD,Geddes JB

更新日期：2015-07-01 00:00:00

abstract：:We incorporate a vector-bias term into a malaria-transmission model to account for the greater attractiveness of infectious humans to mosquitoes in terms of differing probabilities that a mosquito arriving at a human at random picks that human depending on whether he is infectious or susceptible. We prove that transcr...

journal_title：Bulletin of mathematical biology

authors： Chamchod F,Britton NF

更新日期：2011-03-01 00:00:00

abstract：:Several studies suggest that one possible cause of impaired wound healing is failed or insufficient lymphangiogenesis, that is the formation of new lymphatic capillaries. Although many mathematical models have been developed to describe the formation of blood capillaries (angiogenesis), very few have been proposed for...

journal_title：Bulletin of mathematical biology

authors： Bianchi A,Painter KJ,Sherratt JA

更新日期：2016-09-01 00:00:00