Nonlinear simulation of tumor necrosis, neo-vascularization and tissue invasion via an adaptive finite-element/level-set method.

abstract：:We develop a staged-structured population model that describes the competitive dynamics of two functionally similar, congeneric invasive species: zebra mussels and quagga mussels. The model assumes that the population survival rates are functions of temperature and turbidity, and that the two species compete for food....

journal_title：Bulletin of mathematical biology

authors： Huang Q,Wang H,Ricciardi A,Lewis MA

更新日期：2016-03-01 00:00:00

abstract：:We consider a kinetic law of mass action model for Fibroblast Growth Factor (FGF) signaling, focusing on the induction of the RAS-MAP kinase pathway via GRB2 binding. Our biologically simple model suffers a combinatorial explosion in the number of differential equations required to simulate the system. In addition to ...

journal_title：Bulletin of mathematical biology

authors： Gaffney EA,Heath JK,Kwiatkowska MZ

更新日期：2008-11-01 00:00:00

abstract：:This paper is concerned with early development of transformed epithelial cells (TECs) in the presence of fibroblasts in the tumor micro-environment. These two types of cells interact by means of cytokines such as transforming growth factor (TGF-beta) and epidermal growth factor (EGF) secreted, respectively, by the TEC...

journal_title：Bulletin of mathematical biology

authors： Kim Y,Friedman A

更新日期：2010-07-01 00:00:00

abstract：:In this paper, we present computational techniques to investigate the effect of surface geometry on biological pattern formation. In particular, we study two-component, nonlinear reaction-diffusion (RD) systems on arbitrary surfaces. We build on standard techniques for linear and nonlinear analysis of RD systems and e...

journal_title：Bulletin of mathematical biology

authors： Dhillon DS,Milinkovitch MC,Zwicker M

更新日期：2017-04-01 00:00:00

abstract：:Doxorubicin treatment outcomes for non-Hodgkin's lymphomas (NHL) are mathematically modelled and computationally analyzed. The NHL model includes a tumor structure incorporating mature and immature vessels, vascular structural adaptation and NHL cell-cycle kinetics in addition to Doxorubicin pharmacokinetics (PK) and ...

journal_title：Bulletin of mathematical biology

authors： Ribba B,Marron K,Agur Z,Alarcón T,Maini PK

更新日期：2005-01-01 00:00:00

abstract：:We introduce a mesoscopic scale chemotaxis model for traveling wave phenomena which is induced by food metric. The organisms of this simplified kinetic model have two discrete velocity modes, [Formula: see text] and a constant tumbling rate. The main feature of the model is that the speed of organisms is constant [For...

journal_title：Bulletin of mathematical biology

authors： Choi SH,Kim YJ

更新日期：2017-02-01 00:00:00

abstract：:DNA and protein sequence comparisons are performed by a number of computational algorithms. Most of these algorithms search for the alignment of two sequences that optimizes some alignment score. It is an important problem to assess the statistical significance of a given score. In this paper we use newly developed me...

journal_title：Bulletin of mathematical biology

authors： Goldstein L,Waterman MS

更新日期：1992-09-01 00:00:00

abstract：:Viruses that infect bacteria, i.e., bacteriophage or 'phage,' are increasingly considered as treatment options for the control and clearance of bacterial infections, particularly as compassionate use therapy for multi-drug-resistant infections. In practice, clinical use of phage often involves the application of multi...

journal_title：Bulletin of mathematical biology

authors： Li G,Leung CY,Wardi Y,Debarbieux L,Weitz JS

更新日期：2020-06-12 00:00:00

abstract：:The tumour suppressor gene, p53, plays an important role in tumour development. Under low levels of oxygen (hypoxia), cells expressing wild-type p53 undergo programmed cell death (apoptosis), whereas cells expressing mutations in the p53 gene may survive and express angiogenic growth factors that stimulate tumour vasc...

journal_title：Bulletin of mathematical biology

authors： Gammack D,Byrne HM,Lewis CE

更新日期：2001-01-01 00:00:00

abstract：:Cardiac and neural systems share common features of intrinsic oscillation in some cells as well as the ability to propagate excitation. One theoretical approach to study such systems is to develop realistic models for the tissue. This involves first developing detailed ionic "Hodgkin-Huxley"-type models of individual ...

journal_title：Bulletin of mathematical biology

authors： Glass L,Shrier A

更新日期：2015-05-01 00:00:00

abstract：:Advances in fluorescent labeling of cells as measured by flow cytometry have allowed for quantitative studies of proliferating populations of cells. The investigations (Luzyanina et al. in J. Math. Biol. 54:57-89, 2007; J. Math. Biol., 2009; Theor. Biol. Med. Model. 4:1-26, 2007) contain a mathematical model with fluo...

journal_title：Bulletin of mathematical biology

authors： Banks HT,Sutton KL,Thompson WC,Bocharov G,Roose D,Schenkel T,Meyerhans A

更新日期：2011-01-01 00:00:00

abstract：:The apparent synchronisation of spatially discrete populations is a well documented phenomenon. However, it is not clear what the governing mechanisms are for this synchrony, and whether they are robust over a range of environmental conditions and patch specific population dynamic behaviours. In this paper, we explore...

journal_title：Bulletin of mathematical biology

authors： Hillary RM,Bees MA

更新日期：2004-11-01 00:00:00

abstract：:Knowledge about large-scale and long-term dynamics of (natural) populations is required to assess the efficiency of control strategies, the potential for long-term persistence, and the adaptability to global changes such as habitat fragmentation and global warming. For most natural populations, such as pest population...

journal_title：Bulletin of mathematical biology

authors： Soubeyrand S,Neuvonen S,Penttinen A

更新日期：2009-02-01 00:00:00

abstract：:In phylogenetics, a common strategy used to construct an evolutionary tree for a set of species [Formula: see text] is to search in the space of all such trees for one that optimizes some given score function (such as the minimum evolution, parsimony or likelihood score). As this can be computationally intensive, it w...

journal_title：Bulletin of mathematical biology

authors： Bastkowski S,Moulton V,Spillner A,Wu T

更新日期：2015-01-01 00:00:00

abstract：:The Shapley value, a solution concept from cooperative game theory, has recently been considered for both unrooted and rooted phylogenetic trees. Here, we focus on the Shapley value of unrooted trees and first revisit the so-called split counts of a phylogenetic tree and the Shapley transformation matrix that allows f...

journal_title：Bulletin of mathematical biology

authors： Wicke K,Fischer M

更新日期：2019-02-01 00:00:00

abstract：:In this paper, we introduce multiscale persistent functions for biomolecular structure characterization. The essential idea is to combine our multiscale rigidity functions (MRFs) with persistent homology analysis, so as to construct a series of multiscale persistent functions, particularly multiscale persistent entrop...

journal_title：Bulletin of mathematical biology

authors： Xia K,Li Z,Mu L

更新日期：2018-01-01 00:00:00

abstract：:Human rabies is one of the major public health problems in China with an average of 1977 cases per year. It is estimated that 95% of these human rabies cases are due to dog bites. In recent years, the number of wildlife-associated human rabies cases has increased, particularly in the southeast and northeast regions of...

journal_title：Bulletin of mathematical biology

authors： Huang J,Ruan S,Shu Y,Wu X

更新日期：2019-04-01 00:00:00

abstract：:A two-dimensional model for red blood cell motion is adapted to consider the dynamics of breast cancer cells in a microfluidic channel. Adjusting parameters to make the membrane stiffer, as is the case with breast cancer cells compared with red blood cells, allows the model to produce reasonable estimates of breast ca...

journal_title：Bulletin of mathematical biology

authors： Barber J,Zhu L

更新日期：2019-04-01 00:00:00

abstract：:A dynamic model for cell differentiation, where cells with internal chemical reaction dynamics interact with each other and replicate was studied. It led to spontaneous differentiation of cells and determination, as discussed in the isologous diversification. The following features of the differentiation were obtained...

journal_title：Bulletin of mathematical biology

authors： Furusawa C,Kaneko K

更新日期：1998-07-01 00:00:00

abstract：:A stochastic SIRS epidemic model with nonlinear incidence rate and varying population size is formulated to investigate the effect of stochastic environmental variability on inter-pandemic transmission dynamics of influenza A. Sufficient conditions for extinction and persistence of the disease are established. In the ...

journal_title：Bulletin of mathematical biology

authors： Li D,Cui J,Liu M,Liu S

更新日期：2015-09-01 00:00:00

abstract：:When the isothermal semi-logarithmic survival curves of heat inactivated microbial cells or spores are known to be linear it is possible to calculate their survival parameters from curves obtained under nonisothermal conditions, provided that the temperature history ('profile') satisfies certain simple mathematical re...

journal_title：Bulletin of mathematical biology

authors： Peleg M,Normand MD,Campanella OH

更新日期：2003-03-01 00:00:00

abstract：:A protein fold can be viewed as a self-avoiding walk in certain lattice model, and its contact map is a graph that represents the patterns of contacts in the fold. Goldman, Istrail, and Papadimitriou showed that a contact map in the 2D square lattice can be decomposed into at most two stacks and one queue. In the term...

journal_title：Bulletin of mathematical biology

authors： Guo QH,Sun LH,Wang J

更新日期：2017-01-01 00:00:00

abstract：:We extend a spatially non-local cross-diffusion model of aggregation between multiple species with directed motion toward resource gradients to include many species and more general kinds of dispersal. We first consider diffusive instabilities, determining that for directed motion along fecundity gradients, the model ...

journal_title：Bulletin of mathematical biology

authors： Taylor NP,Kim H,Krause AL,Van Gorder RA

更新日期：2020-08-11 00:00:00

abstract：:Systemic chemotherapy is one of the main anticancer treatments used for most kinds of clinically diagnosed tumors. However, the efficacy of these drugs can be hampered by the physical attributes of the tumor tissue, such as tortuous vasculature, dense and fibrous extracellular matrix, irregular cellular architecture, ...

journal_title：Bulletin of mathematical biology

authors： Karolak A,Rejniak KA

更新日期：2019-09-01 00:00:00

abstract：:The lactose operon in Escherichia coli was the first known gene regulatory network, and it is frequently used as a prototype for new modeling paradigms. Historically, many of these modeling frameworks use differential equations. More recently, Stigler and Veliz-Cuba proposed a Boolean model that captures the bistabili...

journal_title：Bulletin of mathematical biology

authors： Jenkins A,Macauley M

更新日期：2017-08-01 00:00:00

abstract：:Continuing the discussion of how children can modify and regularize linguistic inputs from adults, we present a new interpretation of existing algorithms to model and investigate the process of a learner learning from an inconsistent source. On the basis of this approach is a (possibly nonlinear) function (the update ...

journal_title：Bulletin of mathematical biology

authors： Ma T,Komarova NL

更新日期：2017-03-01 00:00:00

abstract：:Cell polarization is an important part of the response of eukaryotic cells to stimuli, and forms a primary step in cell motility, differentiation, and many cellular functions. Among the important biochemical players implicated in the onset of intracellular asymmetries that constitute the early phases of polarization a...

journal_title：Bulletin of mathematical biology

authors： Walther GR,Marée AF,Edelstein-Keshet L,Grieneisen VA

更新日期：2012-11-01 00:00:00

abstract：:A model of embryo energetics was fitted to data from the literature for species as different as snails and mammals. The model is based on assumptions about energy uptake, storage and utilization. It describes the animal by two state variables: volume and energy storage. Embryo weight is taken to be proportional to vol...

journal_title：Bulletin of mathematical biology

authors： Zonneveld C,Kooijman SA

更新日期：1993-05-01 00:00:00

abstract：:We address the observation that, in some cases, patients infected with the hepatitis C virus (HCV) are cleared of HCV when super-infected with the hepatitis A virus (HAV). We hypothesise that this phenomenon can be explained by the competitive exclusion principle, including the action of the immune system, and show th...

journal_title：Bulletin of mathematical biology

authors： Amaku M,Coutinho FA,Chaib E,Massad E

更新日期：2013-01-01 00:00:00

abstract：:This study is concerned with reconciling theoretical modelling of the fluid flow in the airway surface liquid with experimental visualisation of tracer transport in human airway epithelial cultures. The airways are covered by a dense mat of cilia of length approximately 6 microm beating in a watery periciliary liquid ...

journal_title：Bulletin of mathematical biology

authors： Smith DJ,Gaffney EA,Blake JR

更新日期：2007-04-01 00:00:00