Proteogenomics for the Study of Gastrointestinal Stromal Tumors.

Abstract:

:Gastrointestinal stromal tumors (GISTs) are the most common mesenchymal tumors of the gastrointestinal tract. Gain-of-function mutations in KIT or platelet-derived growth factor receptor alpha (PDGFRA) drive most GISTs, and 85 % of GISTs also contain oncogenic mutations in one of two receptor tyrosine kinases. The advent of tyrosine kinase inhibitors has had a significant impact on the clinical practices for GISTs. However, tumors in more than 80 % of GIST patients acquire resistance against treatments with tyrosine kinase inhibitors; thus, driver mechanisms of secondary resistance as well as biomarkers for early detection of recurrence have been explored for better clinical outcomes. Proteomics is a versatile and straightforward approach to finding the molecular basis of malignancies as well as the innovative seeds for clinical applications. Comprehensive genome, epigenome, and transcriptome data have already been obtained and examined together in GISTs, and proteome data has a unique additional value in multi-omics studies. Various types of samples were examined using proteomics modalities in GIST, suggest the promising utility of proteomic approaches.

journal_name

Adv Exp Med Biol

authors

Kondo T

doi

10.1007/978-3-319-42316-6_9

subject

Has Abstract

pub_date

2016-01-01 00:00:00

pages

139-151

eissn

0065-2598

issn

2214-8019

journal_volume

926

pub_type

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