Unlocking the origins and biology of domestic animals using ancient DNA and paleogenomics.

abstract：:Mitochondria are highly dynamic and structurally complex organelles that provide multiple essential metabolic functions. Mitochondrial dysfunction is associated with neurodegenerative conditions such as Parkinson's disease, as well as bacterial infection. Here, we explore the roles of mitochondrial autophagy (mitophag...

journal_title：BMC biology

authors： Pellegrino MW,Haynes CM

更新日期：2015-04-03 00:00:00

abstract：BACKGROUND:The red algae (Rhodophyta) diverged from the green algae and plants (Viridiplantae) over one billion years ago within the kingdom Archaeplastida. These photosynthetic lineages provide an ideal model to study plastid genome reduction in deep time. To this end, we assembled a large dataset of the plastid genom...

journal_title：BMC biology

authors： Lee J,Cho CH,Park SI,Choi JW,Song HS,West JA,Bhattacharya D,Yoon HS

更新日期：2016-09-02 00:00:00

abstract：:Joel Dacks is an Associate Professor and Canada Research Chair in Evolutionary Cell Biology at the University of Alberta, a Scientific Associate at the Natural History Museum (London), and the current President of the International Society for Evolutionary Protistology. His research group studies the evolution and div...

journal_title：BMC biology

authors： Dacks JB

更新日期：2018-11-01 00:00:00

abstract：BACKGROUND:Effective disease management depends on timely and accurate diagnosis to guide control measures. The capacity to distinguish between individuals in a pathogen population with specific properties such as fungicide resistance, toxin production and virulence profiles is often essential to inform disease managem...

journal_title：BMC biology

authors： Radhakrishnan GV,Cook NM,Bueno-Sancho V,Lewis CM,Persoons A,Mitiku AD,Heaton M,Davey PE,Abeyo B,Alemayehu Y,Badebo A,Barnett M,Bryant R,Chatelain J,Chen X,Dong S,Henriksson T,Holdgate S,Justesen AF,Kalous J,Kang Z

更新日期：2019-08-13 00:00:00

abstract：:The close association between hematopoietic and endothelial cells during embryonic development led to the proposal that they may originate from a common ancestor--the hemangioblast. Due to a lack of unique specific markers for in vivo cell fate tracking studies, evidence supporting this theory derives mainly from in v...

journal_title：BMC biology

authors： Gordon-Keylock S,Medvinsky A

更新日期：2011-12-28 00:00:00

abstract：BACKGROUND:The next big challenge in human genetics is understanding the 98% of the genome that comprises non-coding DNA. Hidden in this DNA are sequences critical for gene regulation, and new experimental strategies are needed to understand the functional role of gene-regulation sequences in health and disease. In thi...

journal_title：BMC biology

authors： Schmouth JF,Castellarin M,Laprise S,Banks KG,Bonaguro RJ,McInerny SC,Borretta L,Amirabbasi M,Korecki AJ,Portales-Casamar E,Wilson G,Dreolini L,Jones SJ,Wasserman WW,Goldowitz D,Holt RA,Simpson EM

更新日期：2013-10-14 00:00:00

abstract：BACKGROUND:The digestive systems of animals can become highly specialized in response to their exploration and occupation of new ecological niches. Although studies on different animals have revealed commonalities in gut formation, the model systems Caenorhabditis elegans and Drosophila melanogaster, which belong to th...

journal_title：BMC biology

authors： Martín-Durán JM,Hejnol A

更新日期：2015-04-21 00:00:00

abstract：BACKGROUND:Although native to North America, the invasion of the aphid-like grape phylloxera Daktulosphaira vitifoliae across the globe altered the course of grape cultivation. For the past 150 years, viticulture relied on grafting-resistant North American Vitis species as rootstocks, thereby limiting genetic stocks to...

journal_title：BMC biology

authors： Rispe C,Legeai F,Nabity PD,Fernández R,Arora AK,Baa-Puyoulet P,Banfill CR,Bao L,Barberà M,Bouallègue M,Bretaudeau A,Brisson JA,Calevro F,Capy P,Catrice O,Chertemps T,Couture C,Delière L,Douglas AE,Dufault-Thompson K

更新日期：2020-07-23 00:00:00

abstract：BACKGROUND:Internal tagging of proteins by inserting small functional peptides into surface accessible permissive sites has proven to be an indispensable tool for basic and applied science. Permissive sites are typically identified by transposon mutagenesis on a case-by-case basis, limiting scalability and their exploi...

journal_title：BMC biology

authors： Oesterle S,Roberts TM,Widmer LA,Mustafa H,Panke S,Billerbeck S

更新日期：2017-10-30 00:00:00

abstract：BACKGROUND:Within chromatin, the histone variant H2A.Z plays a role in many diverse nuclear processes including transcription, preventing the spread of heterochromatin and epigenetic transcriptional memory. The molecular mechanisms of how H2A.Z mediates its effects are not entirely understood. However, it is now known ...

journal_title：BMC biology

authors： Dryhurst D,Ishibashi T,Rose KL,Eirín-López JM,McDonald D,Silva-Moreno B,Veldhoen N,Helbing CC,Hendzel MJ,Shabanowitz J,Hunt DF,Ausió J

更新日期：2009-12-14 00:00:00

abstract：:The evolution of plastids from cyanobacteria is believed to represent a singularity in the history of life. The enigmatic amoeba Paulinella and its 'recently' acquired photosynthetic inclusions provide a fascinating system through which to gain fresh insight into how endosymbionts become organelles.The plastids, or ch...

journal_title：BMC biology

authors： Nakayama T,Archibald JM

更新日期：2012-04-24 00:00:00

abstract：BACKGROUND:Cellular functions can be regulated by cell-cell interactions that are influenced by extra-cellular, density-dependent signaling factors. Dictyostelium grow as individual cells in nutrient-rich sources, but, as nutrients become depleted, they initiate a multi-cell developmental program that is dependent upon...

journal_title：BMC biology

authors： Meena NP,Jaiswal P,Chang FS,Brzostowski J,Kimmel AR

更新日期：2019-12-02 00:00:00

abstract：BACKGROUND:Dorsal spine reduction in threespine sticklebacks (Gasterosteus aculeatus) is a classic example of recurrent skeletal evolution in nature. Sticklebacks in marine environments typically have long spines that form part of their skeletal armor. Many derived freshwater populations have evolved shorter spines. Ch...

journal_title：BMC biology

authors： Howes TR,Summers BR,Kingsley DM

更新日期：2017-12-07 00:00:00

abstract：BACKGROUND:Archaeological studies have revealed a series of cultural changes around the Last Glacial Maximum in East Asia; whether these changes left any signatures in the gene pool of East Asians remains poorly indicated. To achieve deeper insights into the demographic history of modern humans in East Asia around the ...

journal_title：BMC biology

authors： Peng MS,Palanichamy MG,Yao YG,Mitra B,Cheng YT,Zhao M,Liu J,Wang HW,Pan H,Wang WZ,Zhang AM,Zhang W,Wang D,Zou Y,Yang Y,Chaudhuri TK,Kong QP,Zhang YP

更新日期：2011-01-10 00:00:00

abstract：BACKGROUND:Early developmental patterns of flatworms are extremely diverse and difficult to compare between distant groups. In parasitic flatworms, such as tapeworms, this is confounded by highly derived life cycles involving indirect development, and even the true orientation of the tapeworm antero-posterior (AP) axis...

journal_title：BMC biology

authors： Koziol U,Jarero F,Olson PD,Brehm K

更新日期：2016-03-04 00:00:00

abstract：BACKGROUND:Phylostratigraphy is a method used to correlate the evolutionary origin of founder genes (that is, functional founder protein domains) of gene families with particular macroevolutionary transitions. It is based on a model of genome evolution that suggests that the origin of complex phenotypic innovations wil...

journal_title：BMC biology

authors： Domazet-Loso T,Tautz D

更新日期：2010-05-21 00:00:00

abstract：BACKGROUND:mTOR signaling is an essential nutrient and energetic sensing pathway. Here we describe AIMTOR, a sensitive genetically encoded BRET (Bioluminescent Resonance Energy Transfer) biosensor to study mTOR activity in living cells. RESULTS:As a proof of principle, we show in both cell lines and primary cell cultu...

journal_title：BMC biology

authors： Bouquier N,Moutin E,Tintignac LA,Reverbel A,Jublanc E,Sinnreich M,Chastagnier Y,Averous J,Fafournoux P,Verpelli C,Boeckers T,Carnac G,Perroy J,Ollendorff V

更新日期：2020-07-03 00:00:00

abstract：BACKGROUND:The green algae Chlamydomonas reinhardtii and Volvox carteri are important models for studying light perception and response, expressing many different photoreceptors. More than 10 opsins were reported in C. reinhardtii, yet only two-the channelrhodopsins-were functionally characterized. Characterization of ...

journal_title：BMC biology

authors： Tian Y,Gao S,von der Heyde EL,Hallmann A,Nagel G

更新日期：2018-12-06 00:00:00

abstract：BACKGROUND:Humans die at an increasing rate until late in life, when mortality rates level off. The causes of the late-life mortality plateau have been debated extensively over the past few years. Here, I examine mortality patterns separately for each of the leading causes of death. The different causes of death show d...

journal_title：BMC biology

authors： Frank SA

更新日期：2004-07-08 00:00:00

abstract：:The expansion of genome sequencing projects has produced accumulating evidence for lateral transfer of genes between prokaryotic and eukaryotic genomes. However, it remains controversial whether these genes are of functional importance in their recipient host. Nikoh and Nakabachi, in a recent paper in BMC Biology, tak...

journal_title：BMC biology

authors： Ros VI,Hurst GD

更新日期：2009-05-05 00:00:00

abstract：BACKGROUND:Parkinson's disease (PD) is a progressive neurodegenerative disorder characterized by both motor and non-motor symptoms. Gastrointestinal tract dysfunction is one of the non-motor features, where constipation is reported as the most common gastrointestinal symptom. Aromatic bacterial metabolites are attracti...

journal_title：BMC biology

authors： van Kessel SP,de Jong HR,Winkel SL,van Leeuwen SS,Nelemans SA,Permentier H,Keshavarzian A,El Aidy S

更新日期：2020-10-20 00:00:00

abstract：BACKGROUND:Drosophila melanogaster has served as a powerful model system for genetic studies of courtship songs. To accelerate research on the genetic and neural mechanisms underlying courtship song, we have developed a sensitive recording system to simultaneously capture the acoustic signals from 32 separate pairs of ...

journal_title：BMC biology

authors： Arthur BJ,Sunayama-Morita T,Coen P,Murthy M,Stern DL

更新日期：2013-01-31 00:00:00

abstract：:A recent report in BMC Biology on the discovery and analysis of biosynthetic genes for ribosomal peptide natural products confirms that these pathways are much more common and diverse than previously suspected, contributing substantially to the chemical arsenal employed by bacteria. See research article http://www.bio...

journal_title：BMC biology

authors： Schmidt EW

更新日期：2010-06-17 00:00:00

abstract：:In the ubiquitin-proteasome system, a subset of ubiquitylated proteins requires the AAA+ ATPase p97 (also known as VCP or Cdc48) for extraction from membranes or protein complexes before delivery to the proteasome for degradation. Diverse ubiquitin adapters are known to link p97 to its client proteins, but two recent ...

journal_title：BMC biology

authors： Meyer H

更新日期：2012-06-13 00:00:00

abstract：BACKGROUND:Membrane proteins form key nodes in mediating the cell's interaction with the surroundings, which is one of the main reasons why the majority of drug targets are membrane proteins. RESULTS:Here we mined the human proteome and identified the membrane proteome subset using three prediction tools for alpha-hel...

journal_title：BMC biology

authors： Almén MS,Nordström KJ,Fredriksson R,Schiöth HB

更新日期：2009-08-13 00:00:00

abstract：:Exosomes are extracellular vesicles first described as such 30 years ago and since implicated in cell-cell communication and the transmission of disease states, and explored as a means of drug discovery. Yet fundamental questions about their biology remain unanswered. Here I explore what exosomes are, highlight the di...

journal_title：BMC biology

authors： Edgar JR

更新日期：2016-06-13 00:00:00

abstract：BACKGROUND:Collective neural crest cell migration is critical to the form and function of the vertebrate face and neck, distributing bone, cartilage, and nerve cells into peripheral targets that are intimately linked with head vasculature. The vasculature and neural crest structures are ultimately linked, but when and ...

journal_title：BMC biology

authors： McKinney MC,McLennan R,Kulesa PM

更新日期：2016-12-15 00:00:00

abstract：BACKGROUND:Although a variety of animals have been used to produce polyclonal antibodies against antigens, the production of antigen-specific monoclonal antibodies from animals remains challenging. RESULTS:We propose a simple and rapid strategy to produce monoclonal antibodies from a variety of animals. By staining ly...

journal_title：BMC biology

authors： Kurosawa N,Yoshioka M,Fujimoto R,Yamagishi F,Isobe M

更新日期：2012-09-28 00:00:00

abstract：BACKGROUND:Eukaryotic genome assembly remains a challenge in part due to the prevalence of complex DNA repeats. This is a particularly acute problem for holocentric nematodes because of the large number of satellite DNA sequences found throughout their genomes. These have been recalcitrant to most genome sequencing met...

journal_title：BMC biology

authors： Eccles D,Chandler J,Camberis M,Henrissat B,Koren S,Le Gros G,Ewbank JJ

更新日期：2018-01-11 00:00:00

abstract：:The vertebrate nervous system is deeply divided into 'somatic' and 'visceral' subsystems that respond to external and internal stimuli, respectively. Molecular characterization of neurons in different groups of mollusks by Nomaksteinsky and colleagues, published in this issue of BMC Biology, reveals that the viscero-s...

journal_title：BMC biology

authors： Bertucci P,Arendt D

更新日期：2013-04-30 00:00:00