Accuracy of high-density genotype imputation in Japanese Black cattle.

abstract：:Relatively large rates of response to traits of economic importance have been observed in different selection experiments in salmon. Several QTL have been mapped in the salmon genome, explaining unprecedented levels of phenotypic variation. Owing to the relatively large selection intensity, individual loci may be indi...

journal_title：Animal genetics

authors： Martinez V,Dettleff P,Lopez P,Fernandez G,Jedlicki A,Yañez JM,Davidson WS

更新日期：2013-04-01 00:00:00

abstract：:Good eggshell quality is important for both table egg quality and chicken reproductive performance. Weak eggshells cause economic losses in all production steps. Poor eggshell quality also poses increased risk for Salmonella infections. Eggshell quality has been a difficult trait to improve by traditional breeding, as...

journal_title：Animal genetics

authors： Tuiskula-Haavisto M,Honkatukia M,Preisinger R,Schmutz M,de Koning DJ,Wei WH,Vilkki J

更新日期：2011-06-01 00:00:00

abstract：:Nucleotide-Binding Oligomerization Domain 2 (NOD2) has been reported to be a candidate gene for Mycobacterium avium subsp. paratuberculosis (MAP) infection in a Bos taurus × Bos indicus mixed breed based on a genetic association with the c.2197T>C single nucleotide polymorphism (SNP). Nevertheless, this SNP has also b...

journal_title：Animal genetics

authors： Ruiz-Larrañaga O,Garrido JM,Iriondo M,Manzano C,Molina E,Koets AP,Rutten VP,Juste RA,Estonba A

更新日期：2010-12-01 00:00:00

abstract：:To increase the number of type I loci on the chicken linkage map, chicken genes containing microsatellite sequences (TAn, CAn, GAn, An) were selected from the nucleotide sequence database and primers were developed to amplify the repeats. Initially, 40 different microsatellites located within genes were tested on a pa...

journal_title：Animal genetics

authors： Groenen MA,Crooijmans RP,Dijkhof RJ,Acar R,van der Poel JJ

更新日期：1999-12-01 00:00:00

abstract：:The Japanese quail (Coturnix japonica; JQ) is one of the domesticated fowl species of Japan. To provide DNA sequence information for examination of its phylogenetic position in the order Galliformes, the complete sequence of the JQ mitochondria was determined. Sequence analysis revealed that the JQ mitochondrial genom...

journal_title：Animal genetics

authors： Nishibori M,Hayashi T,Tsudzuki M,Yamamoto Y,Yasue H

更新日期：2001-12-01 00:00:00

abstract：:The 70 kilodalton heat shock proteins (Hsp70) are highly conserved molecular chaperones which have a crucial role in the stress response of the cell. In mammals, the Hsp70 proteins are encoded by a cluster of three genes: HSPA1A, HSPA1B and HSPA1L. In bovines, this cluster is located on chromosome 23 downstream of the...

journal_title：Animal genetics

authors： Suqueli García MF,Castellote MA,Feingold SE,Corva PM

更新日期：2017-08-01 00:00:00

abstract：:To detect quantitative trait loci (QTL) for litter size related traits, the total number of born piglets (TNB), the number of born alive piglets (NBA), the number of stillborn piglets (NSB) and the number of mummies (NM) at the first parity were recorded in 299 F(2) sows in a White Duroc x Chinese Erhualian intercross...

journal_title：Animal genetics

authors： Li K,Ren J,Xing Y,Zhang Z,Ma J,Guo Y,Huang L

更新日期：2009-12-01 00:00:00

abstract：:The genetic consequences of population differentiation and isolation have been the subject of conservation biology. In this study, we analysed the genetic diversity and structure of Mongolian sheep in China. These animals belong to a traditional local breed with high production, extensive adaption, early maturity and ...

journal_title：Animal genetics

authors： Zhong T,Han JL,Guo J,Zhao QJ,Fu BL,Pu YB,He XH,Jeon JT,Guan WJ,Ma YH

更新日期：2011-10-01 00:00:00

abstract：:An important aim in animal breeding is the improvement of growth and meat quality traits. Previous studies have demonstrated that genetic variants in the fat mass and obesity associated (FTO) gene have a relatively large effect on human obesity as well as on body composition in rodents and, more recently, in livestock...

journal_title：Animal genetics

authors： Jevsinek Skok D,Kunej T,Kovac M,Malovrh S,Potocnik K,Petric N,Zgur S,Dovc P,Horvat S

更新日期：2016-04-01 00:00:00

abstract：:Colostrum intake is critical to a piglet's survival and can be measured by precipitating out the γ-immunoglobulins from serum with ammonium sulfate (immunocrit). Genetic analysis of immunocrits on 5312 piglets indicated that the heritabilities (se) for direct and maternal effects were 0.13 (0.06) and 0.53 (0.08) respe...

journal_title：Animal genetics

authors： Rohrer GA,Rempel LA,Miles JR,Keele JW,Wiedmann RT,Vallet JL

更新日期：2014-06-01 00:00:00

abstract：:Interleukin-26 (IL26) is a member of the IL10 cytokine family. The IL26 gene is located between two other well-known cytokines genes of this family encoding interferon-gamma (IFNG) and IL22 in an evolutionary conserved gene cluster. In contrast to humans and most other mammals, mice lack a functional Il26 gene. We ana...

journal_title：Animal genetics

authors： Shakhsi-Niaei M,Drögemüller M,Jagannathan V,Gerber V,Leeb T

更新日期：2013-12-01 00:00:00

abstract：:The quantitative assessment of genetic diversity within and between populations is important for decision-making in genetic conservation plans. In our study, we applied the livestock core set method to define the contribution of 15 cattle breeds, 11 of which are Portuguese indigenous cattle breeds, to genetic diversit...

journal_title：Animal genetics

authors： Mateus JC,Eding H,Penedo MC,Rangel-Figueiredo MT

更新日期：2004-08-01 00:00:00

abstract：:The objective of genome mapping is to achieve valuable insight into the connection between gene variants (genotype) and observed traits (phenotype). Part of that objective is to understand the selective forces that have operated on a population. Finding links between genotype-phenotype changes makes it possible to ide...

journal_title：Animal genetics

authors： Manzari Z,Mehrabani-Yeganeh H,Nejati-Javaremi A,Moradi MH,Gholizadeh M

更新日期：2019-06-01 00:00:00

abstract：:We measured and compared the transcripts of adipose tissue from Korean native pig (KNP) and Yorkshire (YS) breeds to investigate breed-specific transcription changes. We employed both the Affymetrix porcine genome array and quantitative reverse transcription-polymerase chain reaction (qRT-PCR). We found eight genes sh...

journal_title：Animal genetics

authors： Moon JK,Kim KS,Kim JJ,Choi BH,Cho BW,Kim TH,Lee CK

更新日期：2009-02-01 00:00:00

abstract：:Swine genomic DNA segments containing repetitive sequences were isolated from a porcine genomic library using genomic DNA as a probe. Three fragments containing the repetitive sequences from two of the primary phage clones were subcloned for sequence analysis, which revealed six new PRE-1 repetitive families other tha...

journal_title：Animal genetics

authors： Takahashi H,Awata T,Yasue H

更新日期：1992-01-01 00:00:00

abstract：:Israeli Holstein-Friesian dairy bulls were screened for restriction fragment length polymorphisms by hybridizing cloned DNA probes for bovine growth hormone, for chymosin, and for rat muscle beta-actin to restriction endonuclease-digested DNA immobilized on nitrocellulose filters. The population proved to be polymorph...

journal_title：Animal genetics

authors： Beckmann JS,Kashi Y,Hallerman EM,Nave A,Soller M

更新日期：1986-01-01 00:00:00

abstract：:Tying-up syndrome, also known as recurrent exertional rhabdomyolysis in Thoroughbreds, is a common muscle disorder for racehorses. In this study, we performed a multipoint linkage analysis using LOKI based on the Bayesian Markov chain Monte Carlo method using 5 half-sib families (51 affected and 277 nonaffected horses...

journal_title：Animal genetics

authors： Tozaki T,Hirota K,Sugita S,Ishida N,Miyake T,Oki H,Hasegawa T

更新日期：2010-12-01 00:00:00

abstract：:Polymerase chain reaction (PCR) primers specific to exon 2 of the bovine lymphocyte antigen (BoLA)-DRB3 gene were successfully used to amplify the equivalent region in 469 American bison (Bison bison). In domestic cattle, alleles of DRB3 are assigned through a restriction fragment length polymorphism (RFLP) analysis o...

journal_title：Animal genetics

authors： Morris BG,Spencer MC,Stabile S,Dodd JN

更新日期：1994-06-01 00:00:00

abstract：:Two new alleles (A and E) of the bovine MUC locus which encodes PAS-1 protein, a glycoprotein of the milk fat globule membrane, are reported. The A allele was found in Italian Brown while E was present in the Jersey and the Piedmont breeds. ...

journal_title：Animal genetics

authors： Sacchi P,Macchi E,Rasero R,Fiandra P

更新日期：1995-06-01 00:00:00

abstract：:Among all livestock species, cattle have a prominent status as they have contributed greatly to the economy, nutrition and culture from the beginning of farming societies until the present time. The origins and diversity of local cattle breeds have been widely assessed. However, there are still some regions for which ...

journal_title：Animal genetics

authors： Mahgoub O,Babiker HA,Kadim IT,Al-Kindi M,Hassan S,Al-Marzooqi W,Eltahir YE,Al-Abri MA,Al-Khayat A,Al-Sinani KR,Hilal Al-Khanjari H,Costa V,Chen S,Beja-Pereira A

更新日期：2013-06-01 00:00:00

abstract：:Historical records suggest that horses inhabiting the island of Cheju in Korea are descendants of Mongolian horses introduced in 1276. Other studies, however, suggest that horses may have been present on the island prior to the Mongolian introduction. To determine the origin of the Cheju horses we used a phylogenetic ...

journal_title：Animal genetics

authors： Kim KI,Yang YH,Lee SS,Park C,Ma R,Bouzat JL,Lewin HA

更新日期：1999-04-01 00:00:00

abstract：:The mitochondrial hypervariable region 1 (HVR1) sequence of 67 goats belonging to the Girgentana, Maltese and Derivata di Siria breeds was partially sequenced in order to present the first phylogenetic characterization of Sicilian goat breeds. These sequences were compared with published sequences of Indian and Pakist...

journal_title：Animal genetics

authors： Sardina MT,Ballester M,Marmi J,Finocchiaro R,van Kaam JB,Portolano B,Folch JM

更新日期：2006-08-01 00:00:00

abstract：:Microsatellite polymorphisms are finding increasing use in genetics. In addition to the random isolation of microsatellite markers, such markers can also be developed from sequences already present in public domain databases. An advantage of public domain databases is that these microsatellites are known to be located...

journal_title：Animal genetics

authors： Crooijmans RP,van der Poel JJ,Groenen MA

更新日期：1995-04-01 00:00:00

abstract：:We report the identification of quantitative trait loci (QTL) affecting carcass composition, carcass length, fat deposition and lean meat content using a genome scan across 462 animals from a combined intercross and backcross between Hampshire and Landrace pigs. Data were analysed using multiple linear regression fitt...

journal_title：Animal genetics

authors： Karlskov-Mortensen P,Bruun CS,Braunschweig MH,Sawera M,Markljung E,Enfält AC,Hedebro-Velander I,Josell A,Lindahl G,Lundström K,von Seth G,Jørgensen CB,Andersson L,Fredholm M

更新日期：2006-04-01 00:00:00

abstract：:A bovine genomic large-insert bacterial artificial chromosome (BAC) library has been constructed from leukocytes of a Holstein-Friesian male. Size fractionated DpnII-digested genomic DNA was ligated to the dephosphorylated BamH1 ends of a pBACe3.6 vector. Approximately 8.3 x 10(4) individual BAC clones were picked int...

journal_title：Animal genetics

authors： Buitkamp J,Kollers S,Durstewitz G,Welzel K,Schäfer K,Kellermann A,Lehrach H,Fries R

更新日期：2000-12-01 00:00:00

abstract：:The aim of the study was to investigate quantitative trait loci (QTL) in previously identified regions of chicken chromosomes 1, 4 and 5 relating to 40-day body weights and conformation scores. Half-sib (HS) and variance component analyses were implemented and compared using QTL Express software. Data were from a two-...

journal_title：Animal genetics

authors： Rowe SJ,Windsor D,Haley CS,Burt DW,Hocking PM,Griffin H,Vincent J,De Koning DJ

更新日期：2006-06-01 00:00:00

abstract：:The myxovirus resistance (Mx) proteins belong to the dynamin superfamily and are important for innate host defence against RNA viruses. In this study, we demonstrate that positive elements are present in the two promoter regions of -2713 to -2565 and -688 to -431 in the porcine MX1 gene. Sequencing and alignment of th...

journal_title：Animal genetics

authors： Li Y,Liang S,Liu H,Sun Y,Kang L,Jiang Y

更新日期：2015-08-01 00:00:00

abstract：:As part of a whole genome scan undertaken to detect quantitative trait loci (QTL) affecting milk yield and composition, we have genotyped a granddaughter design comprising 1152 sons for six microsatellite markers spanning bovine chromosome 20. An analysis performed across families provided strong evidence (experiment-...

journal_title：Animal genetics

authors： Arranz JJ,Coppieters W,Berzi P,Cambisano N,Grisart B,Karim L,Marcq F,Moreau L,Mezer C,Riquet J,Simon P,Vanmanshoven P,Wagenaar D,Georges M

更新日期：1998-04-01 00:00:00

abstract：:We describe a polymorphism in the bovine gene PTHG which can be readily typed by PCR assay. The polymorphism is codominantly inherited and the allele frequencies appear characteristic of Bo indicus and B. taurus cattle. ...

journal_title：Animal genetics

authors： Agaba M,Kemp SJ

更新日期：1993-08-01 00:00:00

abstract：:Identification of microRNAs (miRNAs), target genes and regulatory networks associated with innate immune and inflammatory responses and tissue damage is essential to elucidate the molecular and genetic mechanisms for resistance to mastitis. In this study, a combination of Solexa sequencing and custom miRNA chip approa...

journal_title：Animal genetics

authors： Ju Z,Jiang Q,Liu G,Wang X,Luo G,Zhang Y,Zhang J,Zhong J,Huang J

更新日期：2018-02-01 00:00:00