Identification of contemporary selection signatures using composite log likelihood and their associations with marbling score in Korean cattle.

abstract：:A cDNA library for porcine skeletal muscle was established in the vector pBR322. The library was screened with an oligonucleotide probe coding for a hexapeptide from glucosephosphate isomerase (Gpi). A positive clone with an insert of about 450 bp and restriction sites for PstI, BamHI and PvuII was isolated. A 362-bp ...

journal_title：Animal genetics

authors： Davies W,Harbitz I,Hauge JG

更新日期：1987-01-01 00:00:00

abstract：:In domestic goats, the polled intersex syndrome (PIS) refers to XX female-to-male sex reversal associated with the absence of horn growth (polled). The causal variant was previously reported as a 11.7 kb deletion at approximately 129 Mb on chromosome 1 that affects the transcription of both FOXL2 and several long non-...

journal_title：Animal genetics

authors： Simon R,Lischer HEL,Pieńkowska-Schelling A,Keller I,Häfliger IM,Letko A,Schelling C,Lühken G,Drögemüller C

更新日期：2020-06-01 00:00:00

abstract：:Good eggshell quality is important for both table egg quality and chicken reproductive performance. Weak eggshells cause economic losses in all production steps. Poor eggshell quality also poses increased risk for Salmonella infections. Eggshell quality has been a difficult trait to improve by traditional breeding, as...

journal_title：Animal genetics

authors： Tuiskula-Haavisto M,Honkatukia M,Preisinger R,Schmutz M,de Koning DJ,Wei WH,Vilkki J

更新日期：2011-06-01 00:00:00

abstract：:Three genomic clones were isolated from a size-selected pig DNA library by hybridization with a DNA-fingerprint probe. Analysis at the sequence level revealed that all three clones contain interrupted stretches of triplet repeats mainly composed of CAC and CAT triplets. Evaluation of the corresponding loci for polymor...

journal_title：Animal genetics

authors： Coppieters W,Van de Weghe A,Depicker A,Coppieters J,Peelman L,Van Zeveren A,Bouquet Y

更新日期：1995-10-01 00:00:00

abstract：:Single nucleotide polymorphisms (SNPs) in the calpain 1 (CAPN1) and calpastatin (CAST) genes were studied to determine their effects on meat tenderness in Bos taurus cattle. Strip loins (M. longissimus dorsi) were removed from cattle in four resource populations after slaughter (n = 1042), aged under controlled condit...

journal_title：Animal genetics

authors： Morris CA,Cullen NG,Hickey SM,Dobbie PM,Veenvliet BA,Manley TR,Pitchford WS,Kruk ZA,Bottema CD,Wilson T

更新日期：2006-08-01 00:00:00

abstract：:Systems involving many variables are important in population and quantitative genetics, for example, in multi-trait prediction of breeding values and in exploration of multi-locus associations. We studied departures of the joint distribution of sets of genetic variables from independence. New measures of association b...

journal_title：Animal genetics

authors： Gianola D,Manfredi E,Simianer H

更新日期：2012-07-01 00:00:00

abstract：:Classification and regression tree (CART) modelling was used to determine infectious hypodermal and haematopoietic necrosis virus (IHHNV) resistance and susceptibility in Penaeus stylirostris. In a previous study, eight random amplified polymorphic DNA (RAPD) markers and viral load values using real-time quantitative ...

journal_title：Animal genetics

authors： Hizer SE,Wright TM,Garcia DK

更新日期：2004-02-01 00:00:00

abstract：:The recent extension of genetic tools to the domestic cat, together with the serendipitous consequences of selective breeding, have been essential to the study of the genetic diseases that affect them. Cats are increasingly presented for veterinary surveillance and share many of human's heritable diseases, allowing th...

journal_title：Animal genetics

authors： Samaha G,Beatty J,Wade CM,Haase B

更新日期：2019-08-01 00:00:00

abstract：:Microsatellite polymorphisms are finding increasing use in genetics. In addition to the random isolation of microsatellite markers, such markers can also be developed from sequences already present in public domain databases. An advantage of public domain databases is that these microsatellites are known to be located...

journal_title：Animal genetics

authors： Crooijmans RP,van der Poel JJ,Groenen MA

更新日期：1995-04-01 00:00:00

abstract：:A bovine yeast artificial chromosome (YAC) clone containing the superoxide dismutase 1 (SOD1) gene was used as a template for polymerase chain reaction (PCR) amplification using a conserved short interspersed nuclear element (SINE) primer. Two highly polymorphic microsatellites with nine and eight alleles were isolate...

journal_title：Animal genetics

authors： Band M,Eggen A,Bishop MD,Ron M

更新日期：1997-10-01 00:00:00

abstract：:To determine genetic diversity and evolutionary relationships among Chinese buffalo populations, 18 indigenous swamp buffalo populations and two introduced river buffalo breeds were genotyped for 30 microsatellite loci. The mean number of alleles across the 30 loci was 8.13, and the expected heterozygosity ranged from...

journal_title：Animal genetics

authors： Zhang Y,Sun D,Yu Y,Zhang Y

更新日期：2007-12-01 00:00:00

abstract：:We determined the genetic diversity and evolutionary relationships among 26 Chinese indigenous horse breeds and two introduced horse breeds by genotyping these animals for 27 microsatellite loci. The 26 Chinese horse breeds come from 12 different provinces. Two introduced horse breeds were the Mongolia B Horse from Mo...

journal_title：Animal genetics

authors： Ling YH,Ma YH,Guan WJ,Cheng YJ,Wang YP,Han JL,Mang L,Zhao QJ,He XH,Pu YB,Fu BL

更新日期：2011-02-01 00:00:00

abstract：:Albino phenotypes are documented in various species including the American mink. In other species the albino phenotypes are associated with tyrosinase (TYR) gene mutations; therefore TYR was considered the candidate gene for albinism in mink. Four microsatellite markers were chosen in the predicted region of the TYR g...

journal_title：Animal genetics

authors： Anistoroaei R,Fredholm M,Christensen K,Leeb T

更新日期：2008-12-01 00:00:00

abstract：:cDNAs encoding porcine beta-lactoglobulin were isolated and sequenced. The porcine beta-lactoglobulin cDNA is 768bp in length and encodes a pre-protein of 178 amino acids. One additional cDNA clone was found to encode an additional amino acid (lysine) in the mature protein. ...

journal_title：Animal genetics

authors： Alexander LJ,Beattie CW

更新日期：1992-01-01 00:00:00

abstract：:The extent of linkage disequilibrium (LD) between genetic loci has implications for both association studies and the accuracy of genomic prediction. To characterise the persistence of LD in diverse sheep breeds, two SNP genotyping platforms were used. First, existing SNP genotypes from 63 breeds obtained using the ovi...

journal_title：Animal genetics

authors： Kijas JW,Porto-Neto L,Dominik S,Reverter A,Bunch R,McCulloch R,Hayes BJ,Brauning R,McEwan J,International Sheep Genomics Consortium.

更新日期：2014-10-01 00:00:00

abstract：:Genomic selection is becoming a standard tool in livestock breeding programs, particularly for traits that are hard to measure. Accuracy of genomic selection can be improved by increasing the quantity and quality of data and potentially by improving analytical methods. Adding genotypes and phenotypes from additional b...

journal_title：Animal genetics

authors： Farah MM,Swan AA,Fortes MR,Fonseca R,Moore SS,Kelly MJ

更新日期：2016-02-01 00:00:00

abstract：:Genetic differences which exist in the prion protein gene (PRNP) have been reported to influence susceptibility of humans, sheep and goats to prion diseases. In cattle, however, none of the known coding polymorphisms has a direct effect on bovine spongiform encephalopathy (BSE). It has been reported that 23-bp inserti...

journal_title：Animal genetics

authors： Msalya G,Shimogiri T,Nishitani K,Okamoto S,Kawabe K,Minesawa M,Maeda Y

更新日期：2010-04-01 00:00:00

abstract：:In cattle (Bos taurus), there is evidence of more than 50 alleles of BoLA-DQB (bovine lymphocyte antigen DQB) that are distributed across at least five DQB loci, making this region one of the most complex in the BoLA gene family. In this study, DQB alleles were analysed for the water buffalo (Bubalus bubalis), another...

journal_title：Animal genetics

authors： Sena L,Schneider MP,Brenig BB,Honeycutt RL,Honeycutt DA,Womack JE,Skow LC

更新日期：2011-08-01 00:00:00

abstract：:We present herein a bovine chromosome 24 (BTA24) radiation hybrid (RH) map using 40 markers scored on a panel of 90 RHs. Of these markers, 29 loci were ordered with odds of at least 1000:1 in a framework map. An average retention frequency of 17.4% was observed, with relatively higher frequencies near the centromere. ...

journal_title：Animal genetics

authors： Kurar E,Womack JE,Kirkpatrick BW

更新日期：2003-06-01 00:00:00

abstract：:Linkage analysis between the genes coding for immunoglobulin heavy-chain allotypes and variants of some serum alpha-protease inhibitors produced lod scores above the significance limit of 3. The maximum likelihood estimate of the recombination fraction (theta) ranged from 0.15 to 0.20. Since this is the second report ...

journal_title：Animal genetics

authors： Vögeli P,Kühne R,Wysshaar M,Stranzinger G

更新日期：1987-01-01 00:00:00

abstract：:Fractures are medical conditions that compromise the athletic potential of horses and/or the safety of jockeys. Therefore, the reduction of fracture risk is an important horse and human welfare issue. The present study used molecular genetic approaches to determine the effect of genetic risk for fracture at four candi...

journal_title：Animal genetics

authors： Tozaki T,Kusano K,Ishikawa Y,Kushiro A,Nomura M,Kikuchi M,Kakoi H,Hirota K,Miyake T,Hill EW,Nagata S

更新日期：2020-02-01 00:00:00

abstract：:The aim of this study was to determine the allele frequency of the glycogen synthase 1 (GYS1) mutation associated with polysaccharide storage myopathy type 1 in the Austrian Noriker horse. Furthermore, we examined the influence of population substructures on the allele distribution. The study was based upon a comprehe...

journal_title：Animal genetics

authors： Druml T,Grilz-Seger G,Neuditschko M,Brem G

更新日期：2017-02-01 00:00:00

abstract：:Presented herein is an updated sheep cytogenetic map that contains 452 loci (291 type I and 161 type II) assigned to specific chromosome bands or regions on standard R-banded ideograms. This map, which significantly extends our knowledge of the physical organization of the ovine genome, includes new assignments for 88...

journal_title：Animal genetics

authors： Di Meo GP,Perucatti A,Floriot S,Hayes H,Schibler L,Rullo R,Incarnato D,Ferretti L,Cockett N,Cribiu E,Williams JL,Eggen A,Iannuzzi L

更新日期：2007-06-01 00:00:00

abstract：:Bilateral convergent strabismus with exophthalmus (BCSE) is a widespread inherited eye defect in several cattle populations. Its progressive condition often leads to blindness in affected cattle and decreases their usability. Furthermore, the German animal welfare laws prevent breeding with animals whose progeny are e...

journal_title：Animal genetics

authors： Mömke S,Fink S,Wöhlke A,Drögemüller C,Distl O

更新日期：2008-10-01 00:00:00

abstract：:Although there are differences in performance between genetic groups of channel catfish, identification and management of these groups is difficult because catfish strains look alike and individuals cannot be tagged efficiently. Thus, US catfish producers have not been able to objectively identify fish from different ...

journal_title：Animal genetics

authors： Waldbieser GC,Wolters WR

更新日期：2007-04-01 00:00:00

abstract：:Broken and cracked eggshells contribute significantly to economic losses in the egg production industry. We previously identified ovocalyxin-32 as a potential gene influencing eggshell traits, by analysing an intercross between two parent lines developed from the same founder population by a two-way selection for eggs...

journal_title：Animal genetics

authors： Takahashi H,Sasaki O,Nirasawa K,Furukawa T

更新日期：2010-10-01 00:00:00

abstract：:RNA editing is a post-transcription maturation process that diversifies genomically encoded information and can lead to transcriptome diversity. Thanks to next-generation sequencing technologies, a large number of editing sites have been identified in different species. Although this mechanism is well described in mam...

journal_title：Animal genetics

authors： Shafiei H,Bakhtiarizadeh MR,Salehi A

更新日期：2019-10-01 00:00:00

abstract：:Polymorphic bands were detected within the DQB and DRB regions of the ovine major histocompatibility complex by probing TaqI digested DNA from three large sheep half-sib families derived from a highly resistant ram. All animals were phenotypically assessed for Haemonchus contortus resistance by faecal egg counts and a...

journal_title：Animal genetics

authors： Blattman AN,Hulme DJ,Kinghorn BP,Woolaston RR,Gray GD,Beh KJ

更新日期：1993-08-01 00:00:00

abstract：:The objectives of this study were to assign both microsatellite and gene-based markers on porcine chromosome X to two radiation hybrid (RH) panels and to develop a more extensive integrated map of SSC-X. Thirty-five microsatellite and 20 gene-based markers were assigned to T43RH, and 16 previously unreported microsate...

journal_title：Animal genetics

authors： McCoard SA,Fahrenkrug SC,Alexander LJ,Freking BA,Rohrer GA,Wise TH,Ford JJ

更新日期：2002-06-01 00:00:00

abstract：:Relatively large rates of response to traits of economic importance have been observed in different selection experiments in salmon. Several QTL have been mapped in the salmon genome, explaining unprecedented levels of phenotypic variation. Owing to the relatively large selection intensity, individual loci may be indi...

journal_title：Animal genetics

authors： Martinez V,Dettleff P,Lopez P,Fernandez G,Jedlicki A,Yañez JM,Davidson WS

更新日期：2013-04-01 00:00:00