The pluripotency transcription factor network at work in reprogramming.

Abstract:

:Pluripotency-associated transcription factors possess a pivotal role to maintain pluripotency in pluripotent stem cells as well as to induce pluripotency in somatic cells. They direct specific pattern of gene expression from the genome by co-operating with the genetic and epigenetic mechanisms. Recent findings revealed that these mechanisms possess unique features in pluripotent stem cells, which is different from that in somatic cells either qualitatively and quantitatively. To reprogram somatic cells, pluripotency-associated transcription factors should modulate the co-operating machineries to establish the optimal environment for their function to maintain pluripotency-associated transcription factor network.

journal_name

Curr Opin Genet Dev

authors

Niwa H

doi

10.1016/j.gde.2014.08.004

subject

Has Abstract

pub_date

2014-10-01 00:00:00

pages

25-31

eissn

0959-437X

issn

1879-0380

pii

S0959-437X(14)00085-9

journal_volume

28

pub_type

杂志文章,评审
  • Simplicity and complexity in the cyanobacterial circadian clock mechanism.

    abstract::The circadian clock of the cyanobacterium Synechococcus elongatus PCC 7942 is built on a three-protein central oscillator that can be reconstituted in vitro, a redox-sensitive input for synchronization with the environment, and a bacterial two-component signal transduction pathway for global transcriptional regulation...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2010.09.002

    authors: Dong G,Kim YI,Golden SS

    更新日期:2010-12-01 00:00:00

  • Regulation of p21ras by GTPase activating proteins and guanine nucleotide exchange proteins.

    abstract::Ras proteins play a critical role in controlling normal cellular growth and, when activated by mutation, in causing malignant transformation. Regulation of p21ras is achieved by GTPase activating proteins, which control the rate of hydrolysis of GTP to GDP, and also by GDP dissociation stimulators, which catalyze the ...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(05)80315-6

    authors: Downward J

    更新日期:1992-02-01 00:00:00

  • Mechanical signaling in plant morphogenesis.

    abstract::To control changes in shape during development, the molecular regulatory networks have to interact with the mechanical, structural components of the individual cells, in particular the cytoskeleton and the cell wall. A widely accepted hypothesis proposes that molecular regulation interferes with wall synthesis and sti...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2018.04.001

    authors: Zhao F,Chen W,Traas J

    更新日期:2018-08-01 00:00:00

  • Muscular dystrophies: alterations in a limited number of cellular pathways?

    abstract::Identification of new genes involved in muscle disorders has dramatically changed the traditional clinical classification of the large and heterogeneous group of the muscular dystrophies. Results obtained in recent years by positional candidate cloning have demonstrated the role of the sarcolemma and of the nuclear en...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(99)80041-0

    authors: Toniolo D,Minetti C

    更新日期:1999-06-01 00:00:00

  • Gene expression and molecular evolution.

    abstract::The combination of complete genome sequence information and estimates of mRNA abundances have begun to reveal causes of both silent and protein sequence evolution. Translational selection appears to explain patterns of synonymous codon usage in many prokaryotes as well as a number of eukaryotic model organisms (with t...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(00)00250-1

    authors: Akashi H

    更新日期:2001-12-01 00:00:00

  • Cdks and the Drosophila cell cycle.

    abstract::Cyclin-dependent kinases play essential roles in driving the cell cycle. Much progress has been made in Drosophila over the past year in identifying the specific requirements for individual cyclins in particular cell cycle events. These studies encompass many aspects of the cell cycle, from the addition of a G1 phase ...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(97)80104-9

    authors: Follette PJ,O'Farrell PH

    更新日期:1997-02-01 00:00:00

  • Parallels between the proximal-distal development of vertebrate and arthropod appendages: homology without an ancestor?

    abstract::Evolutionary studies suggest that the limbs of vertebrates and the appendages of arthropods do not share a common origin. However, recent genetic studies show new similarities in their developmental programmes. These similarities might be caused by the independent recruitment of homologous genes for similar functions ...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2005.06.007

    authors: Pueyo JI,Couso JP

    更新日期:2005-08-01 00:00:00

  • RNA polymerase II structure: from core to functional complexes.

    abstract::New structural studies of RNA polymerase II (Pol II) complexes mark the beginning of a detailed mechanistic analysis of the eukaryotic mRNA transcription cycle. Crystallographic models of the complete Pol II, together with new biochemical and electron microscopic data, give insights into transcription initiation. The ...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2004.01.003

    authors: Cramer P

    更新日期:2004-04-01 00:00:00

  • Cornelia de Lange Syndrome and the link between chromosomal function, DNA repair and developmental gene regulation.

    abstract::Cornelia de Lange Syndrome (CdLS) is a rare multiple malformation disorder with characteristic facial features, growth and cognitive retardation, and many other abnormalities. CdLS individuals were recently shown to have heterozygous mutations in a previously uncharacterised gene, NIPBL, which encodes delangin, a homo...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2005.04.005

    authors: Strachan T

    更新日期:2005-06-01 00:00:00

  • Prion diseases.

    abstract::There have been remarkably rapid advances in the understanding of prion diseases over the past year. The controversial notion that the transmissible agent may be an abnormal isoform of a host-encoded protein, the prion protein, is now gaining wide acceptance. The conundrum of how a disease can both be inherited as an ...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(05)80156-x

    authors: Collinge J,Palmer MS

    更新日期:1992-06-01 00:00:00

  • Chromatin modification and remodeling during early seed development.

    abstract::Seed development starts at double fertilization when two sperms fuse with a female gamete, the egg and central cell, giving rise to the embryo and endosperm, respectively. Uniting two parental genomes into one, unique, zygotic genome is certainly the first event requiring large-scale chromatin modifications and remode...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2007.09.004

    authors: Baroux C,Pien S,Grossniklaus U

    更新日期:2007-12-01 00:00:00

  • Matching SOX: partner proteins and co-factors of the SOX family of transcriptional regulators.

    abstract::SOX transcription factors perform a remarkable variety of important roles in vertebrate development, either activating or repressing specific target genes through interaction with different partner proteins. Surprisingly, these interactions are often mediated by the conserved, DNA-binding HMG domain, raising questions...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(02)00323-4

    authors: Wilson M,Koopman P

    更新日期:2002-08-01 00:00:00

  • Regeneration and reprogramming.

    abstract::Recent reprogramming studies indicate that mammalian, somatic cells have the potential to achieve pluripotent states and undergo cell type switching. Such cellular traits are observed under natural conditions in animals that regenerate complex organs. A number of invertebrates display the amazing trait of whole body r...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2012.09.006

    authors: Knapp D,Tanaka EM

    更新日期:2012-10-01 00:00:00

  • Segregation of cell lineage in the neural crest.

    abstract::Following neurulation, neural crest cells emerge from the neural tube and undergo extensive migrations. At the onset of migration, multipotent stem cells exist within the neural crest population. Eventually, these assume one of a number of possible fates, ranging from neurons and glia of the peripheral nervous system ...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/0959-437x(93)90101-t

    authors: Bronner-Fraser M

    更新日期:1993-08-01 00:00:00

  • Liquid-like behavior of chromatin.

    abstract::Eukaryotic chromatin is a negatively charged long polymer composed of genomic DNA, histones, and various proteins. The charged property causes the chromatin structure to be dynamically changed. These dynamic changes are critical for genome functions such as gene expression because they directly govern the degree of DN...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2015.11.006

    authors: Maeshima K,Ide S,Hibino K,Sasai M

    更新日期:2016-04-01 00:00:00

  • mRNA translation: influence of the 5' and 3' untranslated regions.

    abstract::Eukaryotic messenger RNA utilization is a tightly controlled process. Control of translation is exerted at several levels, but the predominant step is ribosome binding, which is rate limiting for translation of most mRNAs. There appear to be several alternative modes by which ribosomes bind to the mRNA and initiate tr...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(05)80059-0

    authors: Sonenberg N

    更新日期:1994-04-01 00:00:00

  • Spatial aspects of intracellular information processing.

    abstract::The computational properties of intracellular biochemical networks, for which the cell is assumed to be a 'well-mixed' reactor, have already been widely characterized. What has so far not received systematic treatment is the important role of space in many intracellular computations. Spatial network computations can b...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2009.12.006

    authors: Kinkhabwala A,Bastiaens PI

    更新日期:2010-02-01 00:00:00

  • Combinatorial transcription factors.

    abstract::Combinatorial regulation of eukaryotic transcription is mediated by proteins that associate in a specific manner to form multiprotein DNA-bound complexes. Substantial progress has recently been made towards the understanding of the molecular determinants of the protein-protein and protein-DNA interactions that govern ...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(98)80010-5

    authors: Wolberger C

    更新日期:1998-10-01 00:00:00

  • Pathophysiology and biochemistry of cardiovascular disease.

    abstract::Atherosclerosis is the major cause of cardiovascular disease. Hypercholesterolaemia, hypertension and cigarette smoking are the common risk factors for atherosclerosis. These risk factors unite behind a convergence of mechanism, involving oxidation and inflammation in the artery wall that, with time, gives rise to cha...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2004.04.012

    authors: Scott J

    更新日期:2004-06-01 00:00:00

  • Nuclear neighborhoods and gene expression.

    abstract::The eukaryotic nucleus is a highly compartmentalized and dynamic environment. Chromosome territories are arranged nonrandomly within the nucleus and numerous studies have indicated that a gene's position in the nucleus can impact its transcriptional activity. Here, we focus on recent advances in our understanding of t...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2009.02.007

    authors: Zhao R,Bodnar MS,Spector DL

    更新日期:2009-04-01 00:00:00

  • Morphogenesis on the move: cell-to-cell trafficking of plant regulatory proteins.

    abstract::It has been shown recently that some plant transcription factors that regulate cell fate during development can traffic through plasmodesmata-the intercellular channels that connect plant cells. This phenomenon helps explain the non-autonomous effects of many developmental mutations in plants and defines a novel mecha...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(97)80076-7

    authors: Jackson D,Hake S

    更新日期:1997-08-01 00:00:00

  • Genome mapping databases: data acquisition, storage and access.

    abstract::The introduction of the genome database to the human gene mapping community in September 1990 heralded the advent of a new generation of databases to serve the needs of the human genome initiative over the coming years. The databases will act as a fulcrum around which the activities of the human genome initiative can ...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/0959-437x(91)80052-n

    authors: Pearson PL

    更新日期:1991-06-01 00:00:00

  • Spatiotemporal mechanisms of morphogen gradient interpretation.

    abstract::Few mechanistic ideas from the pre-molecular era of biology have had as enduring an impact as the morphogen concept. In the classical view, cells in developing embryos obtain positional information by measuring morphogen concentrations and comparing them with fixed concentration thresholds; as a result, graded morphog...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2011.10.002

    authors: Nahmad M,Lander AD

    更新日期:2011-12-01 00:00:00

  • Bovine genome mapping: evolutionary inference and the power of comparative genomics.

    abstract::All bovine chromosomes are now represented by a syntenic group, a linkage map and at least one in situ hybridization. Almost 1,000 loci are mapped, about 300 of which are coding sequences useful for comparative mapping and evolutionary inference. Economically important loci are beginning to appear on bovine linkage ma...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/0959-437x(95)80004-o

    authors: Womack JE,Kata SR

    更新日期:1995-12-01 00:00:00

  • How genetic modifiers influence the phenotype of spinal muscular atrophy and suggest future therapeutic approaches.

    abstract::Both complex disorders and monogenetic diseases are often modulated in their phenotype by further genetic, epigenetic or extrinsic factors. This gives rise to extensive phenotypic variability and potentially protection from disease manifestations, known as incomplete penetrance. Approaches including whole transcriptom...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2013.03.003

    authors: Wirth B,Garbes L,Riessland M

    更新日期:2013-06-01 00:00:00

  • The antiquity of group I introns.

    abstract::The recent discovery of self-splicing introns in cyanobacteria has given renewed interest to the question of whether introns may have been present in the ancestor of all living things. The properties of introns in genes of bacteria and bacteriophages are discussed in the context of their possible origin and biological...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(05)80195-9

    authors: Shub DA

    更新日期:1991-12-01 00:00:00

  • Micromechanics of root development in soil.

    abstract::Our understanding of how roots develop in soil may be at the eve of significant transformations. The formidable expansion of imaging technologies enables live observations of the rhizosphere micro-pore architecture at unprecedented resolution. Granular matter physics provides ways to understand the microscopic fluctua...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2018.03.007

    authors: Dupuy LX,Mimault M,Patko D,Ladmiral V,Ameduri B,MacDonald MP,Ptashnyk M

    更新日期:2018-08-01 00:00:00

  • Turning germ cells into stem cells.

    abstract::Primordial germ cells (PGCs), the embryonic precursors of the gametes of the adult animal, can give rise to two types of pluripotent stem cells. In vivo, PGCs can give rise to embryonal carcinoma cells, the pluripotent stem cells of testicular tumors. Cultured PGCs exposed to a specific cocktail of growth factors give...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2003.08.010

    authors: Donovan PJ,de Miguel MP

    更新日期:2003-10-01 00:00:00

  • Establishing myogenic identity during somitogenesis.

    abstract::Over the past year, interest has focused on identifying signalling molecules--including Wnts, Sonic hedgehog, BMP-4, and noggin--that divert somitic mesodermal cells into the muscle lineage, either by induction or derepression. New mouse mutants have also provided insights into somite formation and differentiation, as...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(97)80011-1

    authors: Tajbakhsh S,Cossu G

    更新日期:1997-10-01 00:00:00

  • The molecular origins of multicellular transitions.

    abstract::Multicellularity has evolved multiple times independently from a variety of ancestral unicellular lineages. Past research on multicellularity was focused more on explaining why it was repeatedly invented and less so on the molecular foundations associated with each transition. Several recent comparative functional ana...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2008.09.004

    authors: Rokas A

    更新日期:2008-12-01 00:00:00