Simplicity and complexity in the cyanobacterial circadian clock mechanism.

Abstract:

:The circadian clock of the cyanobacterium Synechococcus elongatus PCC 7942 is built on a three-protein central oscillator that can be reconstituted in vitro, a redox-sensitive input for synchronization with the environment, and a bacterial two-component signal transduction pathway for global transcriptional regulation. This review covers the most recent progress in our understanding of the biological and biochemical mechanism of this bacterial clock, such as the discovery of a quinone-binding activity of the oscillator protein KaiA, the molecular mechanism of circadian control of cell division, and the global control of gene expression via modulation of DNA topology.

journal_name

Curr Opin Genet Dev

authors

Dong G,Kim YI,Golden SS

doi

10.1016/j.gde.2010.09.002

subject

Has Abstract

pub_date

2010-12-01 00:00:00

pages

619-25

issue

6

eissn

0959-437X

issn

1879-0380

pii

S0959-437X(10)00161-9

journal_volume

20

pub_type

杂志文章,评审
  • Crop evolution: from genetics to genomics.

    abstract::The advent of the genomics age has greatly facilitated the study of crop evolution. While full-scale genome sequencing projects are underway for just a handful of crop plants, recent years have witnessed a tremendous increase in the availability of DNA sequence data for virtually all major crops. Such resources have b...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2007.09.003

    authors: Burke JM,Burger JC,Chapman MA

    更新日期:2007-12-01 00:00:00

  • Congenital nephrotic syndromes.

    abstract::Many acquired and familial renal diseases in man lead to kidney dysfunction and nephrotic syndrome. These diseases share a common pathological fate in the form of glomerular dysfunction and proteinuria. Classification of the disease is difficult because the onset of pathological appearance in congenital nephrotic synd...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(00)00197-0

    authors: Khoshnoodi J,Tryggvason K

    更新日期:2001-06-01 00:00:00

  • Transcription and DNA supercoiling.

    abstract::Transcription and supercoiling of the DNA template are interrelated. This review summarizes recent progress in the study of how template topology affects transcription, and how transcription affects template topology inside wild-type and DNA topoisomerase mutant cells. The interplay between DNA supercoiling and transc...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(05)80096-6

    authors: Wang JC,Lynch AS

    更新日期:1993-10-01 00:00:00

  • Baculoviruses: high-level expression in insect cells.

    abstract::Baculoviruses continue to serve as workhorse vectors for the high-level expression of eukaryotic genes in insect cells; however, numerous researchers are also finding novel uses for these vectors by taking advantage of the unique nature of the viruses and their host cells. Concurrently, the technology involved in cons...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(05)80348-x

    authors: Miller LK

    更新日期:1993-02-01 00:00:00

  • microRNAs, the cell's Nepenthe: clearing the past during the maternal-to-zygotic transition and cellular reprogramming.

    abstract::The maternal-to-zygotic transition (MZT) is a universal step in animal development characterized by two major events: activation of zygotic transcription and degradation of maternally provided mRNAs. How zygotic gene products instruct the degradation of maternal messages remains a long-standing question in biology. Mi...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2010.04.003

    authors: Giraldez AJ

    更新日期:2010-08-01 00:00:00

  • Post-transcriptional control of stress responses in cancer.

    abstract::The processes by which the canonical protein synthesis machinery is modified by environmental stresses to allow healthy cells to respond to external conditions to maintain homeostasis, are frequently hijacked by tumour cells to enhance their survival. Two major stress response pathways that play a major role in this r...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2017.10.006

    authors: Harvey RF,Willis AE

    更新日期:2018-02-01 00:00:00

  • Functions of the BRCA1 and BRCA2 genes.

    abstract::Mutations in the BRCA1 and BRCA2 genes confer a high risk of breast cancer development. Both genes encode very large proteins of unknown function but recent results suggest that they may have roles in transcriptional regulation and DNA repair. These advances offer the prospect of understanding not only the normal cell...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(98)80056-7

    authors: Bertwistle D,Ashworth A

    更新日期:1998-02-01 00:00:00

  • Mechanical signaling in plant morphogenesis.

    abstract::To control changes in shape during development, the molecular regulatory networks have to interact with the mechanical, structural components of the individual cells, in particular the cytoskeleton and the cell wall. A widely accepted hypothesis proposes that molecular regulation interferes with wall synthesis and sti...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2018.04.001

    authors: Zhao F,Chen W,Traas J

    更新日期:2018-08-01 00:00:00

  • Genes mirror migrations and cultures in prehistoric Europe-a population genomic perspective.

    abstract::Genomic information from ancient human remains is beginning to show its full potential for learning about human prehistory. We review the last few years' dramatic finds about European prehistory based on genomic data from humans that lived many millennia ago and relate it to modern-day patterns of genomic variation. T...

    journal_title:Current opinion in genetics & development

    pub_type: 历史文章,杂志文章,评审

    doi:10.1016/j.gde.2016.09.004

    authors: Günther T,Jakobsson M

    更新日期:2016-12-01 00:00:00

  • Assembly of nucleosomes: do multiple assembly factors mean multiple mechanisms?

    abstract::In eukaryotic cells, transcription and DNA replication occur on DNA templates associated with chromatin proteins, most notably histone octamers. Protein factors that can assemble these units have been isolated from many sources. In particular, one factor from human cells is associated with ongoing DNA synthesis; other...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(05)80049-8

    authors: Kaufman PD,Botchan MR

    更新日期:1994-04-01 00:00:00

  • Novel gene families involved in neural pathfinding.

    abstract::Recent studies have uncovered a bifunctional role of the diffusible axon guidance molecules netrin-1 and UNC-6 in that they attract some axons and steer others away simultaneously. Homology screens have extended the semaphorin and collapsin family to include at least 20 members, in both secreted and membrane-bound for...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(96)80069-4

    authors: Müller BK,Bonhoeffer F,Drescher U

    更新日期:1996-08-01 00:00:00

  • Chromatin organization: form to function.

    abstract::Recent developments in technology have made it possible to create high resolution genome-wide maps of histone marks, DNA binding proteins and physical interactions along genomic regions. Chromatin features are found together in different combinations, dividing the genome up into domains with distinct functional proper...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2012.11.011

    authors: de Graaf CA,van Steensel B

    更新日期:2013-04-01 00:00:00

  • Papillomaviruses and human oncogenesis.

    abstract::During the past year, significant advances have been made in understanding the functions of the oncoproteins, E6 and E7, of human papillomaviruses that are associated with malignant genital tumors. In addition, important new information is now available on the responses of both the keratinocyte and of the individual f...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(05)80329-6

    authors: Gissmann L

    更新日期:1992-02-01 00:00:00

  • Coordination of cell growth with cell division.

    abstract::Proliferating cells must increase their mass coordinately with cell division. Recent evidence suggests that coupling of cell growth with cell division might be achieved by making synthesis of activators of cell division particularly sensitive to the capacity of the cell's protein synthesis machinery. ...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(99)80011-2

    authors: Polymenis M,Schmidt EV

    更新日期:1999-02-01 00:00:00

  • The structure-function link of compensated chromatin in Drosophila.

    abstract::All the aspects of transcription are controlled by complexes that modify or remodel chromatin at the level of individual genes, gene clusters, or whole chromosomes. The MSL complex that is responsible for dosage compensation in Drosophila is an example of complexes that operate at the whole-chromosome level on the tra...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2009.10.004

    authors: Lucchesi JC

    更新日期:2009-12-01 00:00:00

  • Non-insect crustacean models in developmental genetics including an encomium to Parhyale hawaiensis.

    abstract::The impressive diversity of body plans, lifestyles and segmental specializations exhibited by crustaceans (barnacles, copepods, shrimps, crabs, lobsters and their kin) provides great material to address longstanding questions in evolutionary developmental biology. Recent advances in forward and reverse genetics and in...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2016.07.004

    authors: Stamataki E,Pavlopoulos A

    更新日期:2016-08-01 00:00:00

  • Myc-Max-Mad: a transcription factor network controlling cell cycle progression, differentiation and death.

    abstract::The Myc oncoprotein dimerizes with its partner, Max, to bind DNA, activate transcription, and promote cell proliferation, as well as programmed cell death. Max also forms homodimers or heterodimers with its alternative partners, Mad and Mxi-1. These complexes behave as antagonists of Myc/Max through competition for co...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/0959-437x(94)90098-1

    authors: Amati B,Land H

    更新日期:1994-02-01 00:00:00

  • Phylogeny and natural history of the primate lentiviruses, SIV and HIV.

    abstract::Studies of primate lentivirus phylogeny over the past decade have established a minimum of five related, but genetically distinct, groups of simian immunodeficiency virus (SIV), each originating from a different African primate species. The hypothesis that HIV-2 (and SIVmac) arose by cross-species transmission from so...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/0959-437x(95)80014-v

    authors: Hirsch VM,Dapolito G,Goeken R,Campbell BJ

    更新日期:1995-12-01 00:00:00

  • Pathophysiology and biochemistry of cardiovascular disease.

    abstract::Atherosclerosis is the major cause of cardiovascular disease. Hypercholesterolaemia, hypertension and cigarette smoking are the common risk factors for atherosclerosis. These risk factors unite behind a convergence of mechanism, involving oxidation and inflammation in the artery wall that, with time, gives rise to cha...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2004.04.012

    authors: Scott J

    更新日期:2004-06-01 00:00:00

  • Recent progress in single-cell cancer genomics.

    abstract::The advent of single-cell sequencing has been revolutionary to the field of cancer genomics. Perfectly suited to capture cancer's heterogeneous nature, single-cell analyses provide information bulk sequencing could never hope to uncover. Many mechanisms of cancer have yet to be fully understood, and single-cell approa...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2017.01.002

    authors: Tsoucas D,Yuan GC

    更新日期:2017-02-01 00:00:00

  • Getting signals crossed in C. elegans.

    abstract::The induction of an appropriate cellular response to a stimulus often depends on the intricate interplay between multiple signaling pathways. Recent work utilizing Caenorhabditis elegans has enabled the identification of points of convergence between signaling pathways and permitted the elucidation of how multiple sig...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(00)00122-2

    authors: Hanna-Rose W,Han M

    更新日期:2000-10-01 00:00:00

  • Candidate gene association studies: successes and failures.

    abstract::Epidemiologic studies of twins indicate that 20-40% of common tumors such as breast, colorectal, and prostate cancers are inherited. However, the effect of high penetrance tumor susceptibility genes such as APC, BRCA1, BRAC2, MSH1, MLH2 and MSH6 only accounts for a small fraction of these cancers. Low to moderate pene...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2010.03.006

    authors: Pasche B,Yi N

    更新日期:2010-06-01 00:00:00

  • Regulation of p21ras by GTPase activating proteins and guanine nucleotide exchange proteins.

    abstract::Ras proteins play a critical role in controlling normal cellular growth and, when activated by mutation, in causing malignant transformation. Regulation of p21ras is achieved by GTPase activating proteins, which control the rate of hydrolysis of GTP to GDP, and also by GDP dissociation stimulators, which catalyze the ...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(05)80315-6

    authors: Downward J

    更新日期:1992-02-01 00:00:00

  • Vertebrate craniofacial development: novel approaches and new dilemmas.

    abstract::Unexpected patterns of neuroblast, angioblast and myoblast movement and tissue organization have been defined using lineage tracing and transplantation methods. The most novel and enigmatic new data derive from analyses of genes in the Hox- and Pax-gene families. In addition to the characterization of expression patte...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(05)80175-3

    authors: Noden DM

    更新日期:1992-08-01 00:00:00

  • Chromatin modification and remodeling during early seed development.

    abstract::Seed development starts at double fertilization when two sperms fuse with a female gamete, the egg and central cell, giving rise to the embryo and endosperm, respectively. Uniting two parental genomes into one, unique, zygotic genome is certainly the first event requiring large-scale chromatin modifications and remode...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2007.09.004

    authors: Baroux C,Pien S,Grossniklaus U

    更新日期:2007-12-01 00:00:00

  • Barrett's metaplasia as a paradigm for understanding the development of cancer.

    abstract::The conversion of one cell type to another is defined as metaplasia (or sometimes it is referred to as transdifferentiation or cellular reprogramming). Metaplasia is important clinically and may predispose to the development of cancer. Barrett's metaplasia is one such example and is the focus of the present review. Ba...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2012.08.001

    authors: Burke ZD,Tosh D

    更新日期:2012-10-01 00:00:00

  • Homeobox genes in vertebrate gastrulation.

    abstract::The formation and anteroposterior patterning of the three definitive germ layers, ectoderm, or epiblast, is the common theme of vertebrate gastrulation. What changes from system to system is the geometry of these events and the nature of the non-epiblast transient structures implicated. A number of molecular markers, ...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/0959-437x(95)80031-x

    authors: Boncinelli E,Mallamaci A

    更新日期:1995-10-01 00:00:00

  • Cellular abnormalities of blood vessels as targets in cancer.

    abstract::Tumor blood vessels have multiple structural and functional abnormalities. They are unusually dynamic, and naturally undergo sprouting, proliferation, remodeling or regression. The vessels are irregularly shaped, tortuous, and lack the normal hierarchical arrangement of arterioles, capillaries and venules. Endothelial...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2004.12.005

    authors: Baluk P,Hashizume H,McDonald DM

    更新日期:2005-02-01 00:00:00

  • Muscular dystrophies: alterations in a limited number of cellular pathways?

    abstract::Identification of new genes involved in muscle disorders has dramatically changed the traditional clinical classification of the large and heterogeneous group of the muscular dystrophies. Results obtained in recent years by positional candidate cloning have demonstrated the role of the sarcolemma and of the nuclear en...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/s0959-437x(99)80041-0

    authors: Toniolo D,Minetti C

    更新日期:1999-06-01 00:00:00

  • Combinatorial complexity in chromatin structure and function: revisiting the histone code.

    abstract::Covalent modifications of histone proteins play key roles in transcription, DNA repair, recombination, and other such processes. Over a hundred histone modifications have been described, and a popular idea in the field is that the function of a single histone mark cannot be understood without understanding its combina...

    journal_title:Current opinion in genetics & development

    pub_type: 杂志文章,评审

    doi:10.1016/j.gde.2012.02.013

    authors: Rando OJ

    更新日期:2012-04-01 00:00:00