Lipid bilayer composition can influence the orientation of proteorhodopsin in artificial membranes.

Abstract:

:Artificial membrane systems allow researchers to study the structure and function of membrane proteins in a matrix that approximates their natural environment and to integrate these proteins in ex vivo devices such as electronic biosensors, thin-film protein arrays, or biofuel cells. Given that most membrane proteins have vectorial functions, both functional studies and applications require effective control over protein orientation within a lipid bilayer. In this work, we explored the role of the bilayer surface charge in determining transmembrane protein orientation and functionality during formation of proteoliposomes. We reconstituted a model vectorial ion pump, proteorhodopsin, in liposomes of opposite charges and varying charge densities and determined the resultant protein orientation. Antibody-binding assay and proteolysis of proteoliposomes showed physical evidence of preferential orientation, and functional assays verified the vectorial nature of ion transport in this system. Our results indicate that the manipulation of lipid composition can indeed control orientation of an asymmetrically charged membrane protein, proteorhodopsin, in liposomes.

journal_name

Biophys J

journal_title

Biophysical journal

authors

Tunuguntla R,Bangar M,Kim K,Stroeve P,Ajo-Franklin CM,Noy A

doi

10.1016/j.bpj.2013.07.043

subject

Has Abstract

pub_date

2013-09-17 00:00:00

pages

1388-96

issue

6

eissn

0006-3495

issn

1542-0086

pii

S0006-3495(13)00865-5

journal_volume

105

pub_type

杂志文章
  • Components of sodium and chloride flux across toad bladder.

    abstract::The effect of transepithelial potential difference (psi) on Na and Cl flux across toad bladder was assessed by measuring isotopic flux between identical media at various values of psi. The contribution of edge damage to ionic permeability was eliminated, resulting in relatively high spontaneous psi (-97 +/-4 mv) and l...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(72)86089-2

    authors: Walser M

    更新日期:1972-04-01 00:00:00

  • Halorhodopsin and sensory rhodopsin contain a C6-C7 s-trans retinal chromophore.

    abstract::Halorhodopsin (HR) and sensory rhodopsin (SR) have been regenerated with retinal analogues that are covalently locked in the 6-s-cis or 6-s-trans conformations. Both pigments regenerate more completely with the locked 6-s-trans retinal and produce analogue pigments with absorption maxima (577 nm for HR and 592 nm for ...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(89)82791-2

    authors: Baselt DR,Fodor SP,van der Steen R,Lugtenburg J,Bogomolni RA,Mathies RA

    更新日期:1989-01-01 00:00:00

  • Troponin Revealed: Uncovering the Structure of the Thin Filament On-Off Switch in Striated Muscle.

    abstract::Recently, our understanding of the structural basis of troponin-tropomyosin's Ca2+-triggered regulation of striated muscle contraction has advanced greatly, particularly via cryo-electron microscopy data. Compelling atomic models of troponin-tropomyosin-actin were published for both apo- and Ca2+-saturated states of t...

    journal_title:Biophysical journal

    pub_type: 杂志文章,评审

    doi:10.1016/j.bpj.2020.11.014

    authors: Tobacman LS

    更新日期:2021-01-05 00:00:00

  • Dynamics of the inward rectifier K+ current during the action potential of guinea pig ventricular myocytes.

    abstract::The potassium selective, inward rectifier current (IK1) is known to be responsible for maintaining the resting membrane potential of quiescent ventricular myocytes. However, the contribution of this current to the different phases of the cardiac action potential has not been adequately established. In the present stud...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(91)82187-7

    authors: Ibarra J,Morley GE,Delmar M

    更新日期:1991-12-01 00:00:00

  • Lipid Droplet Phase Transition in Freezing Cat Embryos and Oocytes Probed by Raman Spectroscopy.

    abstract::Embryo and oocyte cryopreservation is a widely used technology for cryopreservation of genetic resources. One limitation of cryopreservation is the low tolerance to freezing observed for oocytes and embryos rich in lipid droplets. We apply Raman spectroscopy to investigate freezing of lipid droplets inside cumulus-ooc...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2018.06.019

    authors: Okotrub KA,Mokrousova VI,Amstislavsky SY,Surovtsev NV

    更新日期:2018-08-07 00:00:00

  • Minor groove deformability of DNA: a molecular dynamics free energy simulation study.

    abstract::The conformational deformability of nucleic acids can influence their function and recognition by proteins. A class of DNA binding proteins including the TATA box binding protein binds to the DNA minor groove, resulting in an opening of the minor groove and DNA bending toward the major groove. Explicit solvent molecul...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.106.083816

    authors: Zacharias M

    更新日期:2006-08-01 00:00:00

  • Analysis of synaptic transmission in the neuromuscular junction using a continuum finite element model.

    abstract::There is a steadily growing body of experimental data describing the diffusion of acetylcholine in the neuromuscular junction and the subsequent miniature endplate currents produced at the postsynaptic membrane. To gain further insights into the structural features governing synaptic transmission, we have performed ca...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(98)77610-6

    authors: Smart JL,McCammon JA

    更新日期:1998-10-01 00:00:00

  • A continuously variable frequency cross-correlation phase fluorometer with picosecond resolution.

    abstract::A detailed description of the construction and performance of a variable frequency cross-correlation phase fluorometer is reported. The phase fluorometer operates over the frequency range 1-160 MHz with a maximum resolution of a few picoseconds. The effects of distortions introduced by the light modulator and the nonl...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(83)84305-7

    authors: Gratton E,Limkeman M

    更新日期:1983-12-01 00:00:00

  • Asymmetric Phosphatidylethanolamine Distribution Controls Fusion Pore Lifetime and Probability.

    abstract::Little attention has been given to how the asymmetric lipid distribution of the plasma membrane might facilitate fusion pore formation during exocytosis. Phosphatidylethanolamine (PE), a cone-shaped phospholipid, is predominantly located in the inner leaflet of the plasma membrane and has been proposed to promote memb...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2017.09.014

    authors: Kreutzberger AJB,Kiessling V,Liang B,Yang ST,Castle JD,Tamm LK

    更新日期:2017-11-07 00:00:00

  • Protons Trigger Mitochondrial Flashes.

    abstract::Emerging evidence indicates that mitochondrial flashes (mitoflashes) are highly conserved elemental mitochondrial signaling events. However, which signal controls their ignition and how they are integrated with other mitochondrial signals and functions remain elusive. In this study, we aimed to further delineate the s...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2016.05.052

    authors: Wang X,Zhang X,Huang Z,Wu D,Liu B,Zhang R,Yin R,Hou T,Jian C,Xu J,Zhao Y,Wang Y,Gao F,Cheng H

    更新日期:2016-07-26 00:00:00

  • Whole-embryo modeling of early segmentation in Drosophila identifies robust and fragile expression domains.

    abstract::Segmentation of the Drosophila melanogaster embryo results from the dynamic establishment of spatial mRNA and protein patterns. Here, we exploit recent temporal mRNA and protein expression measurements on the full surface of the blastoderm to calibrate a dynamical model of the gap gene network on the entire embryo cor...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2011.05.060

    authors: Bieler J,Pozzorini C,Naef F

    更新日期:2011-07-20 00:00:00

  • Gating of cyclic nucleotide-gated (CNGA1) channels by cGMP jumps and depolarizing voltage steps.

    abstract::We expressed rod-type homotetrameric cyclic nucleotide-gated (CNGA1) channels in Xenopus oocytes and studied activation by photolysis-induced jumps of the 3',5'-cyclic guanosine monophosphate (cGMP) concentration and by voltage steps. cGMP jumps to increasing concentrations up to the EC50 value of 46.5 microM decelera...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.105.078667

    authors: Nache V,Kusch J,Hagen V,Benndorf K

    更新日期:2006-05-01 00:00:00

  • Mathematical Model Shows How Sleep May Affect Amyloid-β Fibrillization.

    abstract::Deposition of amyloid-β (Aβ) fibers in the extracellular matrix of the brain is a ubiquitous feature associated with several neurodegenerative disorders, especially Alzheimer's disease (AD). Although many of the biological aspects that contribute to the formation of Aβ plaques are well addressed at the intra- and inte...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2020.07.011

    authors: Hoore M,Khailaie S,Montaseri G,Mitra T,Meyer-Hermann M

    更新日期:2020-08-18 00:00:00

  • Effect of electrostatic interactions on phase stability of cubic phases of membranes of monoolein/dioleoylphosphatidic acid mixtures.

    abstract::To elucidate effects of electrostatic interactions resulting from surface charges on structures and phase stability of cubic phases of lipid membranes, membranes of 1-monoolein (MO) and dioleoylphosphatidic acid (DOPA) (DOPA/MO membrane) mixtures have been investigated by small-angle x-ray scattering method. As increa...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(01)75756-6

    authors: Li SJ,Yamashita Y,Yamazaki M

    更新日期:2001-08-01 00:00:00

  • A direct coupling between global and internal motions in a single domain protein? MD investigation of extreme scenarios.

    abstract::Proteins are not rigid molecules, but exhibit internal motions on timescales ranging from femto- to milliseconds and beyond. In solution, proteins also experience global translational and rotational motions, sometimes on timescales comparable to those of the internal fluctuations. The possibility that internal and glo...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2011.05.041

    authors: Hamaneh MB,Zhang L,Buck M

    更新日期:2011-07-06 00:00:00

  • Two-dimensional nanoscale structural and functional imaging in individual collagen type I fibrils.

    abstract::The piezoelectric properties of single collagen type I fibrils in fascia were imaged with sub-20 nm spatial resolution using piezoresponse force microscopy. A detailed analysis of the piezoresponse force microscopy signal in controlled tip-fibril geometry revealed shear piezoelectricity parallel to the fibril axis. Th...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2010.02.047

    authors: Harnagea C,Vallières M,Pfeffer CP,Wu D,Olsen BR,Pignolet A,Légaré F,Gruverman A

    更新日期:2010-06-16 00:00:00

  • Theoretical analysis of the significance of whether or not enzymes or transport systems in structured media follow Michaelis-Menten kinetics.

    abstract::Pure Michaelis-Menten enzymes have been studied (i.e., enzymes with a hyperbolic (S, V) behavior in a well-stirred solution). When such enzymes are associated with a structure in vitro, even in the simplest conceivable form (immobilization in a homogeneous gel), they can produce enzymic or transport reactions with man...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(83)84401-4

    authors: Vincent JC,Thellier M

    更新日期:1983-01-01 00:00:00

  • Metal-ligand complexes as a new class of long-lived fluorophores for protein hydrodynamics.

    abstract::We describe the use of asymmetric Ru-ligand complexes as a new class of luminescent probes that can be used to measure rotational motions of proteins. These complexes are known to display luminescent lifetimes ranging from 10 to 4000 ns. In this report, we show that the asymmetric complex Ru(bpy)2(dcbpy) (PF6)2 displa...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(95)80193-1

    authors: Terpetschnig E,Szmacinski H,Malak H,Lakowicz JR

    更新日期:1995-01-01 00:00:00

  • Selective detection of the rotational dynamics of the protein-associated lipid hydrocarbon chains in sarcoplasmic reticulum membranes.

    abstract::We have developed a saturation transfer EPR (ST-EPR) method to measure selectively the rotational dynamics of those lipids that are motionally restricted by integral membrane proteins and have applied this methodology to measure lipid-protein interactions in native sarcoplasmic reticulum (SR) membranes. This analysis ...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(89)82721-3

    authors: Squier TC,Thomas DD

    更新日期:1989-10-01 00:00:00

  • Random hydrolysis controls the dynamic instability of microtubules.

    abstract::Uncovering mechanisms that control the dynamics of microtubules is fundamental for our understanding of multiple cellular processes such as chromosome separation and cell motility. Building on previous theoretical work on the dynamic instability of microtubules, we propose here a stochastic model that includes all rel...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2011.12.059

    authors: Padinhateeri R,Kolomeisky AB,Lacoste D

    更新日期:2012-03-21 00:00:00

  • Orientation of adsorbed cytochrome c as a function of the electrical potential of the interface studied by total internal reflection fluorescence.

    abstract::A method for determination of the orientation of adsorbed structure-stable proteins using Total Internal Reflection Fluorescence is outlined. The theory has been elaborated for orientation studies on adsorbed free base cytochrome c, of which the prophyrin can be used as an intrinsic fluorescent label. The ratio of flu...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(90)82616-3

    authors: Fraaije JG,Kleijn JM,van der Graaf M,Dijt JC

    更新日期:1990-05-01 00:00:00

  • A nuclear magnetic resonance investigation of the energetics of basepair opening pathways in DNA.

    abstract::The opening of basepairs plays a key role in DNA replication and transcription, and in the action of DNA repair and modification enzymes. In this article, we have used proton exchange to define the energetics of the pathways for basepair opening in two DNA 17-mer duplexes. The rates of exchange of imino protons with s...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.105.065763

    authors: Coman D,Russu IM

    更新日期:2005-11-01 00:00:00

  • The thermodynamics of general anesthesia.

    abstract::It is known that the action of general anesthetics is proportional to their partition coefficient in lipid membranes (Meyer-Overton rule). This solubility is, however, directly related to the depression of the temperature of the melting transition found close to body temperature in biomembranes. We propose a thermodyn...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.106.099754

    authors: Heimburg T,Jackson AD

    更新日期:2007-05-01 00:00:00

  • Optimizing planar lipid bilayer single-channel recordings for high resolution with rapid voltage steps.

    abstract::We describe two enhancements of the planar bilayer recording method which enable low-noise recordings of single-channel currents activated by voltage steps in planar bilayers formed on apertures in partitions separating two open chambers. First, we have refined a simple and effective procedure for making small bilayer...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(90)82376-6

    authors: Wonderlin WF,Finkel A,French RJ

    更新日期:1990-08-01 00:00:00

  • STICCS reveals matrix-dependent adhesion slipping and gripping in migrating cells.

    abstract::Two-color spatio-temporal image cross-correlation spectroscopy (STICCS) is a new, to our knowledge, image analysis method that calculates space-time autocorrelation and cross-correlation functions from fluorescence intensity fluctuations. STICCS generates cellular flow and diffusion maps that reveal interactions and c...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2012.08.060

    authors: Toplak T,Pandzic E,Chen L,Vicente-Manzanares M,Horwitz AR,Wiseman PW

    更新日期:2012-10-17 00:00:00

  • Temperature modulation of integrin-mediated cell adhesion.

    abstract::In response to external stimuli, cells modulate their adhesive state by regulating the number and intrinsic affinity of receptor/ligand bonds. A number of studies have shown that cell adhesion is dramatically reduced at room or lower temperatures as compared with physiological temperature. However, the underlying mech...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2010.06.037

    authors: Rico F,Chu C,Abdulreda MH,Qin Y,Moy VT

    更新日期:2010-09-08 00:00:00

  • Spectroscopic and molecular modeling studies of caffeine complexes with DNA intercalators.

    abstract::Recent studies have demonstrated that caffeine can act as an antimutagen and inhibit the cytoxic and/or cytostatic effects of some DNA intercalating agents. It has been suggested that this inhibitory effect may be due to complexation of the DNA intercalator with caffeine. In this study we employ optical absorption, fl...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(96)79587-5

    authors: Larsen RW,Jasuja R,Hetzler RK,Muraoka PT,Andrada VG,Jameson DM

    更新日期:1996-01-01 00:00:00

  • Excitation properties of the squid axon membrane and model systems with current stimulation. Statistical evaluation and comparison.

    abstract::The space-clamped squid axon membrane and two versions of the Hodgkin-Huxley model (the original, and a strongly adapting version) are subjected to a first order dynamic analysis. Stable, repetitive firing is induced by phase-locking nerve impulses to sinusoidal currents. The entrained impulses are then pulse position...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(80)85078-8

    authors: Fohlmeister JF,Adelman WJ Jr,Poppele RE

    更新日期:1980-04-01 00:00:00

  • Temperature-Induced Catch-Slip to Slip Bond Transit in Plasmodium falciparum-Infected Erythrocytes.

    abstract::Plasmodium falciparum malaria-infected red blood cells (IRBCs), or erythrocytes, avoid splenic clearance by adhering to host endothelium. Upregulation of endothelial receptors intercellular adhesion molecule-1 (ICAM-1) and cluster of differentiation 36 (CD36) are associated with severe disease pathology. Most in vitro...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2019.11.016

    authors: Lim YB,Thingna J,Kong F,Dao M,Cao J,Lim CT

    更新日期:2020-01-07 00:00:00

  • Kinesin and dynein-dynactin at intersecting microtubules: motor density affects dynein function.

    abstract::Kinesin and cytoplasmic dynein are microtubule-based motor proteins that actively transport material throughout the cell. Microtubules can intersect at a variety of angles both near the nucleus and at the cell periphery, and the behavior of molecular motors at these intersections has implications for long-range transp...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.107.120014

    authors: Ross JL,Shuman H,Holzbaur EL,Goldman YE

    更新日期:2008-04-15 00:00:00