Spectrum of NIPBL gene mutations in Polish patients with Cornelia de Lange syndrome.

Abstract:

:Cornelia de Lange syndrome (CdLS) is a rare multi-system genetic disorder characterised by growth and developmental delay, distinctive facial dysmorphism, limb malformations and multiple organ defects. The disease is caused by mutations in genes responsible for the formation and regulation of cohesin complex. About half of the cases result from mutations in the NIPBL gene coding delangin, a protein regulating the initialisation of cohesion. To date, approximately 250 point mutations have been identified in more than 300 CdLS patients worldwide. In the present study, conducted on a group of 64 unrelated Polish CdLS patients, 25 various NIPBL sequence variants, including 22 novel point mutations, were detected. Additionally, large genomic deletions on chromosome 5p13 encompassing the NIPBL gene locus were detected in two patients with the most severe CdLS phenotype. Taken together, 42 % of patients were found to have a deleterious alteration affecting the NIPBL gene, by and large private ones (89 %). The review of the types of mutations found so far in Polish patients, their frequency and correlation with the severity of the observed phenotype shows that Polish CdLS cases do not significantly differ from other populations.

journal_name

J Appl Genet

authors

Kuzniacka A,Wierzba J,Ratajska M,Lipska BS,Koczkowska M,Malinowska M,Limon J

doi

10.1007/s13353-012-0126-9

subject

Has Abstract

pub_date

2013-02-01 00:00:00

pages

27-33

issue

1

eissn

1234-1983

issn

2190-3883

journal_volume

54

pub_type

杂志文章
  • A de novo interstitial 6q deletion in a boy with a split hand malformation.

    abstract::We report on a de novo interstitial deletion of (6)(q15q22.2) in a 5-year-old boy with developmental delay, microcephaly, facial dysmorphism, cryptorchidism, congenital heart defect, and split-hand malformation. Previous reports and this patient suggest that 6q21 may contain a gene or genes related either directly or ...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:10.1007/BF03195240

    authors: Duran-Gonzalez J,Gutierrez-Angulo M,Garcia-Cruz D,Ayala Mde L,Padilla M,Davalos IP

    更新日期:2007-01-01 00:00:00

  • Interactions between Glu-1 and Glu-3 loci and associations of selected molecular markers with quality traits in winter wheat (Triticum aestivum L.) DH lines.

    abstract::The quality of wheat depends on a large complex of genes and environmental factors. The objective of this study was to identify quantitative trait loci controlling technological quality traits and their stability across environments, and to assess the impact of interaction between alleles at loci Glu-1 and Glu-3 on gr...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:10.1007/s13353-016-0362-5

    authors: Krystkowiak K,Langner M,Adamski T,Salmanowicz BP,Kaczmarek Z,Krajewski P,Surma M

    更新日期:2017-02-01 00:00:00

  • Genetic control of bacterial biofilms.

    abstract::Nearly all bacterial species, including pathogens, have the ability to form biofilms. Biofilms are defined as structured ecosystems in which microbes are attached to surfaces and embedded in a matrix composed of polysaccharides, eDNA, and proteins, and their development is a multistep process. Bacterial biofilms const...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章,评审

    doi:10.1007/s13353-015-0309-2

    authors: Wolska KI,Grudniak AM,Rudnicka Z,Markowska K

    更新日期:2016-05-01 00:00:00

  • First results on the genetic diversity of the invasive signal crayfish Pacifastacus leniusculus (Dana, 1852) in Europe using novel microsatellite loci.

    abstract::The introduction of non-native crayfish in aquatic ecosystems is very common due to human activities (e.g. aquaculture, recreational and commercial fisheries). The signal crayfish, Pacifastacus leniusculus (Dana, 1852), is one of the most widespread invasive species in Europe. Although several important ecological and...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:10.1007/s13353-015-0272-y

    authors: Froufe E,Varandas S,Teixeira A,Sousa R,Filipová L,Petrusek A,Edsman L,Lopes-Lima M

    更新日期:2015-08-01 00:00:00

  • Morphological diversity of androgenic carrot plants.

    abstract::The aim of this study was to evaluate phenotypic variation of R0 androgenic plants obtained from four seed sources and donor plants by anther culture. Several morphological traits (leaf size, petiole length, leaf division, cortex colour) and the range of diversity were evaluated. There was large variation in all trait...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:

    authors: Kozik EU,Nowak R,Kłosińska U,Górecka K,Krzyzanowska D,Górecki R

    更新日期:2002-01-01 00:00:00

  • Biochemical differences in Cannabis sativa L. depending on sexual phenotype.

    abstract::Hemp (Cannabis sativa L.) is a species considered as having one of the most complicated mechanisms of sex determination. Peroxidase and esterase isoenzymes in leaves of the two sexual phenotypes of hemp were studied. Significant differences in isoperoxidase and isoesterase patterns were found between male and female p...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:

    authors: Truţa E,Gille E,Tóth E,Maniu M

    更新日期:2002-01-01 00:00:00

  • DNA asymmetry and the replicational mutational pressure.

    abstract::The mode of replication and organisation of bacterial genomes impose asymmetry on their nucleotide composition. The asymmetry is seen in coding and non-coding sequences and is reflected in the amino acid composition of proteins. The mechanisms generating asymmetry include: unequal mutation rates connected with replica...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:

    authors: Kowalczuk M,Mackiewicz P,Mackiewicz D,Nowicka A,Dudkiewicz M,Dudek MR,Cebrat S

    更新日期:2001-01-01 00:00:00

  • Neural stem cell implantation extends life in Niemann-Pick C1 mice.

    abstract::In order to evaluate the phenotypic effects of implanted neural stem cells (NSCs) in the mouse model of Niemann-Pick C (NPC) disease, we injected a well-characterized clone of murine NSCs into the cerebella of neonatal Npc1(-/-) and control mice. The implanted cells survived and were abundant in some regions of the ce...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:10.1007/BF03195222

    authors: Ahmad I,Hunter RE,Flax JD,Snyder EY,Erickson RP

    更新日期:2007-01-01 00:00:00

  • New PAH gene promoter KLF1 and 3'-region C/EBPalpha motifs influence transcription in vitro.

    abstract::Phenylketonuria (PKU) is a metabolic disease caused by mutations in the phenylalanine hydroxylase (PAH) gene. Although the PAH genotype remains the main determinant of PKU phenotype severity, genotype-phenotype inconsistencies have been reported. In this study, we focused on unanalysed sequences in non-coding PAH gene...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:10.1007/s13353-016-0359-0

    authors: Klaassen K,Stankovic B,Kotur N,Djordjevic M,Zukic B,Nikcevic G,Ugrin M,Spasovski V,Srzentic S,Pavlovic S,Stojiljkovic M

    更新日期:2017-02-01 00:00:00

  • Gene expression analysis identifies new candidate genes associated with the development of black skin spots in Corriedale sheep.

    abstract::The white coat colour of sheep is an important economic trait. For unknown reasons, some animals are born with, and others develop with time, black skin spots that can also produce pigmented fibres. The presence of pigmented fibres in the white wool significantly decreases the fibre quality. The aim of this work was t...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:10.1007/s13353-011-0066-9

    authors: Peñagaricano F,Zorrilla P,Naya H,Robello C,Urioste JI

    更新日期:2012-02-01 00:00:00

  • The F279Y polymorphism of the GHR gene and its relation to milk production and somatic cell score in German Holstein dairy cattle.

    abstract::The bovine growth hormone receptor (GHR) gene has been identified as a strong positional and functional candidate gene influencing milk production. A non-synonymous single nucleotide polymorphism (SNP) in exon 8 leads to a phenylalanine to tyrosine amino acid substitution (F279Y) in the receptor. The aim of the study ...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:10.1007/s13353-011-0051-3

    authors: Rahmatalla SA,Müller U,Strucken EM,Reissmann M,Brockmann GA

    更新日期:2011-11-01 00:00:00

  • A simplified AFLP method for fingerprinting of common wheat (Triticum aestivum L.) cultivars.

    abstract::The simplified AFLP method was developed and evaluated for identification and genetic diversity studies of wheat cultivars. Selective primers exploited in AFLP assay based on a single cutting enzyme PstI ((PstI)AFLP) generated total of 111 robust fragments, including 67 (60%) monomorphic and 12 (11%) cultivar-specific...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:

    authors: Tyrka M

    更新日期:2002-01-01 00:00:00

  • Sequence characteristics and divergent evolution of the chloroplast psbA-trnH noncoding region in gymnosperms.

    abstract::The psbA-trnH intergenic region is among the most variable regions in the gymnosperm chloroplast genome. It is proposed as suitable for DNA barcoding studies and is useful in phylogenetics at the species level. This region consists of two parts differing in their evolutionary characteristics: 1) the psbA 3’UTR (...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:10.1007/BF03208855

    authors: Hao DC,Chen SL,Xiao PG

    更新日期:2010-01-01 00:00:00

  • Inheritance of seed dormancy in Tibetan semi-wild wheat accession Q1028.

    abstract::Tibetan semi-wild wheat (Triticum aestivum ssp. tibetanum Shao) is one of the Chinese endemic hexaploid wheat genetic resources, distributed only in the Qinghai-Xizang Plateau of China. It has special characters, such as a hulled glume and spike disarticulation. However, seed dormancy, another important character for ...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:

    authors: Lan XJ,Wei YM,Liu DC,Yan ZH,Zheng YL

    更新日期:2005-01-01 00:00:00

  • Genetic variability of milk fatty acids.

    abstract::The milk fatty acid (FA) profile is far from the optimal fat composition in regards to human health. The natural sources of variation, such as feeding or genetics, could be used to increase the concentrations of unsaturated fatty acids. The impact of feeding is well described. However, genetic effects on the milk FA c...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:10.1007/BF03195649

    authors: Arnould VM,Soyeurt H

    更新日期:2009-01-01 00:00:00

  • Quantitative trait loci with sex-specific effects for internal organs weights and hematocrit value in a broiler-layer cross.

    abstract::Rapid growth in broilers is associated with susceptibility to metabolic disorders such as pulmonary hypertension syndrome (ascites) and sudden death. This study describes a genome search for QTL associated with relative weight of cardio respiratory and metabolically important organs (heart, lungs, liver and gizzard), ...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:10.1007/s13353-015-0325-2

    authors: Moura AS,Ledur MC,Boschiero C,Nones K,Pinto LF,Jaenisch FR,Burt DW,Coutinho LL

    更新日期:2016-05-01 00:00:00

  • Fingerprinting of common wheat cultivars with an Alw44I-based AFLP method.

    abstract::A simplified AFLP method, based on methylation-sensitive Alw44I restriction endonuclease, has been developed and evaluated for fingerprinting 15 wheat cultivars. The selected germplasms represented groups of spring and winter wheats with and without the 1BL.1RS translocation. Ten selective primers yielded 57 markers, ...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:

    authors: Tyrka M

    更新日期:2004-01-01 00:00:00

  • Identification of novel candidate genes for the inverted teat defect in sows using a genome-wide marker panel.

    abstract::The number of functional teats is an important selection criterion in pig breeding. Inherited defects of the udder, such as the inverted teat, do have a considerable negative impact on the nursing ability of the sow. To investigate the genetic background of this defect and the number of functional teats in Swedish mat...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:10.1007/s13353-016-0382-1

    authors: Chalkias H,Jonas E,Andersson LS,Jacobson M,de Koning DJ,Lundeheim N,Lindgren G

    更新日期:2017-05-01 00:00:00

  • Current genetic methodologies in the identification of disaster victims and in forensic analysis.

    abstract::This review presents the basic problems and currently available molecular techniques used for genetic profiling in disaster victim identification (DVI). The environmental conditions of a mass disaster often result in severe fragmentation, decomposition and intermixing of the remains of victims. In such cases, traditio...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章,评审

    doi:10.1007/s13353-011-0068-7

    authors: Ziętkiewicz E,Witt M,Daca P,Zebracka-Gala J,Goniewicz M,Jarząb B,Witt M

    更新日期:2012-02-01 00:00:00

  • A new PCR-RFLP within the domestic pigeon (Columba livia var. domestica) cytochrome b (MTCYB) gene.

    abstract::A total of 244 domestic pigeons (Columba livia var. domestica) were genotyped using the PCR-RFLP method. A 999 bp fragment of the MTCYB gene was amplified. The amplification products were digested with restriction enzymes. PCR-RFLP for MvaI restriction enzyme was observed. Frequencies of alleles were as follows: MTCYB...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:

    authors: Dybus A,Knapik K

    更新日期:2005-01-01 00:00:00

  • Internal correspondence analysis of codon and amino-acid usage in thermophilic bacteria.

    abstract::Starting from two datasets of codon usage in coding sequences from mesophilic and thermophilic bacteria, we used internal correspondence analysis to study the variability of codon usage within and between species, and within and between amino acids. The first dataset included 18,958,458 codons from 58,482 coding seque...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:

    authors: Lobry JR,Chessel D

    更新日期:2003-01-01 00:00:00

  • Analysis of chromosomal polymorphism in barley (Hordeum vulgare L. ssp. vulgare) and between H. vulgare and H. chilense using three-color fluorescence in situ hybridization (FISH).

    abstract::The aim of the present work was to study chromosomal polymorphism within cultivated barley (Hordeum vulgare ssp. vulgare) using three-color fluorescence in situ hybridization (FISH). The physical distribution of the most frequently used, highly repetitive DNA sequences (GAA)7 specific for pericentromeric heterochromat...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:10.1007/s13353-013-0167-8

    authors: Szakács É,Kruppa K,Molnár-Láng M

    更新日期:2013-11-01 00:00:00

  • Expression analysis of somatic embryogenesis-related SERK, LEC1, VP1 and NiR ortologues in rye (Secale cereale L.).

    abstract::The genetic basis of the regeneration process in cultured immature embryos of rye (Secale cereale L.) was analyzed. The experiments were designed to reveal differences between the in vitro culture responses of two inbred lines: L318 (a high regeneration ability) and L9 (a low potential for regeneration). The rye ortol...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:10.1007/s13353-010-0015-z

    authors: Gruszczyńska A,Rakoczy-Trojanowska M

    更新日期:2011-02-01 00:00:00

  • Statistical measures of uncertainty for branches in phylogenetic trees inferred from molecular sequences by using model-based methods.

    abstract::In recent years, the emphasis of theoretical work on phylogenetic inference has shifted from the development of new tree inference methods to the development of methods to measure the statistical support for the topologies. This paper reviews 3 approaches to assign support values to branches in trees obtained in the a...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章,评审

    doi:10.1007/BF03195249

    authors: Wróbel B

    更新日期:2008-01-01 00:00:00

  • Epigenetic chromatin modifications in barley after mutagenic treatment.

    abstract::In addition to their normal developmental processes, plants have evolved complex genetic and epigenetic regulatory mechanisms to cope with various environmental stresses. It has been shown that both DNA methylation and histone modifications are involved in DNA damage response to various types of stresses. In this stud...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:10.1007/s13353-014-0226-9

    authors: Braszewska-Zalewska A,Tylikowska M,Kwasniewska J,Szymanowska-Pulka J

    更新日期:2014-11-01 00:00:00

  • Electrophoretic seed globulin patterns and species relationships in the genus Lens Miller.

    abstract::SDS-PAGE analysis of seed globulins covered 200 accessions of the following Lens taxa: L. culinaris subsp. culinaris, L. culinaris subsp. orientalis, L. odemensis, L. ervoides, L. nigricans, L. lamottei and L. tomentosus. The number of polypeptide bands detected in particular taxa varied from 22 in L. lamottei to 35 i...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:

    authors: Zimniak-Przybylska Z,Przybylska J,Krajewski P

    更新日期:2001-01-01 00:00:00

  • Molecular identification of slow rusting resistance Lr46/Yr29 gene locus in selected triticale (× Triticosecale Wittmack) cultivars.

    abstract::Recently, leaf rust and yellow rust caused by the fungi Puccinia triticina Erikss. and P. striiformis Westend f. sp. tritici Eriks and Henn are diseases of increasing threat in triticale (× Triticosecale Wittmack, AABBRR, 2n = 6x = 42) growing areas. The use of genetic resistance is considered the most economical, eff...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:10.1007/s13353-020-00562-8

    authors: Skowrońska R,Tomkowiak A,Nawracała J,Kwiatek MT

    更新日期:2020-09-01 00:00:00

  • Novel linkage mapping approach using DNA pooling in human and animal genetics. II. Detection of quantitative traits loci in dairy cattle.

    abstract::Selective DNA pooling is an advanced methodology for linkage mapping of quantitative trait loci (QTL) in farm animals. The principle is based on densitometric estimates of marker allele frequency in pooled DNA samples of phenotypically extreme individuals from half-sib, backcross and F(2) experimental designs in farm ...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章,评审

    doi:

    authors: Pareek CS,Pareek RS,Walawski K

    更新日期:2002-01-01 00:00:00

  • Splicing mutations in human genetic disorders: examples, detection, and confirmation.

    abstract::Precise pre-mRNA splicing, essential for appropriate protein translation, depends on the presence of consensus "cis" sequences that define exon-intron boundaries and regulatory sequences recognized by splicing machinery. Point mutations at these consensus sequences can cause improper exon and intron recognition and ma...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章,评审

    doi:10.1007/s13353-018-0444-7

    authors: Anna A,Monika G

    更新日期:2018-08-01 00:00:00

  • Genotoxicity of inhalation anaesthetics: DNA lesions generated by sevoflurane in vitro and in vivo.

    abstract::A moderate genotoxic activity of halothane and isoflurane applied as volatile anaesthetics has already been shown. The aim of this work was to estimate a potential genotoxicity of sevoflurane, introduced to clinical practice later than halothane and isoflurane. A genotoxic activity of all three compounds was estimated...

    journal_title:Journal of applied genetics

    pub_type: 杂志文章

    doi:

    authors: Szyfter K,Szulc R,Mikstacki A,Stachecki I,Rydzanicz M,Jałoszyński P

    更新日期:2004-01-01 00:00:00