A high-throughput assay for HIV-1 integrase 3'-processing activity using time-resolved fluorescence.

Abstract:

:HIV-1 integrase (HIV-1 IN), a well-validated antiviral drug target, catalyzes multistep reactions to incorporate viral DNA into the genome of the host cell; these include both a 3'-processing (3'P) reaction and a strand transfer reaction. These enzymatic activities can be measured in vitro with short DNA oligonucleotides that mimic a single viral LTR DNA end and purified IN. A highly sensitive and reproducible time-resolved fluorescence (TRF)-based assay for HIV-1 IN 3'P activity is now reported. This assay was optimized with respect to time and concentrations of metal ions, substrate and enzyme. The assay has now been used successfully to measure HIV-1 IN 3'P activity and has been shown to detect the anti-IN activity of several known 3'P inhibition compounds accurately. This assay, which is amenable to high-throughput screening, will be useful for identification of additional HIV-1 IN 3'P inhibitors.

journal_name

J Virol Methods

authors

Han YS,Quashie P,Mesplede T,Xu H,Mekhssian K,Fenwick C,Wainberg MA

doi

10.1016/j.jviromet.2012.05.003

subject

Has Abstract

pub_date

2012-09-01 00:00:00

pages

34-40

issue

1-2

eissn

0166-0934

issn

1879-0984

pii

S0166-0934(12)00159-0

journal_volume

184

pub_type

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