Identification of candidate genes carrying polymorphisms associated with the risk of colorectal cancer by analyzing the colorectal mutome and microRNAome.

Abstract:

BACKGROUND:The presence of single-nucleotide polymorphisms (SNPs) within the 3'-untranslated regions of genes could affect the binding between a microRNA (miRNA) and its target, with consequences on gene expression regulation. Considering the important role of miRNAs in carcinogenesis, it is hypothesized here that these SNPs could also affect the individual risk of colorectal cancer (CRC). METHODS:To test this hypothesis, a list was developed of 140 somatically mutated genes deduced from previous works on the mutome of the CRC. A further selection was conducted of SNPs within target sites for miRNAs that are expressed only in the colorectum (the colorectal microRNAome) and having adequate population frequencies. This yielded 12 SNPs that were genotyped in a case-control association study on 717 colorectal cases and 1171 controls from the Czech Republic. RESULTS:Statistically significant associations were found between the risk of CRC and the variant alleles of KIAA0182 (rs709805) (odds ratio = 1.57; 95% confidence interval = 1.06-2.78, for the variant homozygotes) and NUP210 genes (rs354476) (odds ratio = 1.36; 95% confidence interval = 1.02-1.82, for the variant homozygotes). CONCLUSIONS:The results support the study hypothesis and highlight the importance of SNPs within miRNA-dependent regulatory regions. Further studies on the role exerted by NUP210 and KIAA0182 in colorectal carcinogenesis are warranted.

journal_name

Cancer

journal_title

Cancer

authors

Landi D,Gemignani F,Pardini B,Naccarati A,Garritano S,Vodicka P,Vodickova L,Canzian F,Novotny J,Barale R,Landi S

doi

10.1002/cncr.27435

subject

Has Abstract

pub_date

2012-10-01 00:00:00

pages

4670-80

issue

19

eissn

0008-543X

issn

1097-0142

journal_volume

118

pub_type

杂志文章

相关文献

CANCER文献大全
  • Patient-controlled analgesic administration. A comparison of steady-state morphine infusions with bolus doses.

    abstract::The authors have shown previously that bone marrow transplant (BMT) patients who self-administered bolus doses of morphine gained equal oral mucositis pain relief while using less drug compared with similar patients receiving morphine by staff-controlled continuous infusion. In a follow-up study they compared the effi...

    journal_title:Cancer

    pub_type: 临床试验,杂志文章

    doi:10.1002/1097-0142(19910215)67:4<873::aid-cncr28206

    authors: Hill HF,Mackie AM,Coda BA,Iverson K,Chapman CR

    更新日期:1991-02-15 00:00:00

  • Changes in serum levels of Forssman-like antibody in patients with gastric cancer.

    abstract::Because Forssman antigen, one of the most well-known heteroantigens, has been noted in certain cancerous tissues, it would seem that the serum levels of the Forssman antibody of patients with these cancers would be low, owing to the absorption of the naturally occurring antibody by the Forssman antigen-containing canc...

    journal_title:Cancer

    pub_type: 杂志文章

    doi:10.1002/1097-0142(19890415)63:8<1528::aid-cncr2820

    authors: Hirayama R,Hirokawa K,Takagi Y,Utsuyama M,Maejima S,Takemura K,Mishima Y,Makinodan T

    更新日期:1989-04-15 00:00:00

  • Adenoid cystic carcinoma of the salivary gland. Sustained complete response to chemotherapy.

    abstract::A patient developed widely metastatic adenoid cystic carcinoma of the parotid gland after several local recurrences. A complete regression of pleural, pulmonary parenchymal, cutaneous, and bone metastases was seen following therapy with 5-fluorouracil, Adriamycin, and mitomycin C. This is the second complete response ...

    journal_title:Cancer

    pub_type: 杂志文章

    doi:10.1002/1097-0142(19830215)51:4<589::aid-cncr28205

    authors: Budd GT,Groppe CW

    更新日期:1983-02-15 00:00:00

  • Merkel cell carcinoma: critical review with guidelines for multidisciplinary management.

    abstract::Merkel cell carcinoma (MCC) is a relatively rare cutaneous malignancy that occurs predominantly in the older white population. The incidence of MCC appears to have tripled during the past 20 years; an increase that is likely to continue because of the growing number of older Americans. The pathogenesis of MCC remains ...

    journal_title:Cancer

    pub_type: 杂志文章,评审

    doi:10.1002/cncr.22765

    authors: Bichakjian CK,Lowe L,Lao CD,Sandler HM,Bradford CR,Johnson TM,Wong SL

    更新日期:2007-07-01 00:00:00

  • Radiofrequency field-induced thermal cytotoxicity in cancer cells treated with fluorescent nanoparticles.

    abstract:BACKGROUND:Nonionizing radiation, such as radiofrequency field and near infrared laser, induces thermal cytotoxicity in cancer cells treated with gold nanoparticles. Quantum dots are fluorescent semiconducting nanoparticles that were hypothesized to induce similar injury after radiofrequency field irradiation. METHODS...

    journal_title:Cancer

    pub_type: 杂志文章

    doi:10.1002/cncr.25135

    authors: Glazer ES,Curley SA

    更新日期:2010-07-01 00:00:00

  • The use of interstitial radiation therapy in the treatment of persistent, localized, and unresectable cancer in children.

    abstract::Two children with cancer that persisted after multiple exploratory laparotomies, external beam radiation therapy, and multidrug chemotherapy had gold 198 (198Au) seeds implanted into their localized but unresectable tumor. Both children are alive, are receiving no therapy, and are disease-free more than 2 years later....

    journal_title:Cancer

    pub_type: 杂志文章

    doi:10.1002/1097-0142(19860301)57:5<951::aid-cncr28205

    authors: Knight PJ,Doornbos JF,Rosen D,Lin JJ,Farha GJ

    更新日期:1986-03-01 00:00:00

  • Acute myelogenous leukemia as a second malignant neoplasm following the successful treatment of advanced Hodgkin's disease.

    abstract::Of 209 Hodgkin's disease patients treated at least 6 months with a five-drug combination of induction chemotherapy and having a complete remission, four patients developed acute myelogenous leukemia (AML) as a second malignant neoplasm. The overall relative risk for development of AML is 185.0 (P less than 0.05) and t...

    journal_title:Cancer

    pub_type: 临床试验,杂志文章,随机对照试验

    doi:10.1002/1097-0142(19831215)52:12<2209::aid-cncr282

    authors: Bartolucci AA,Liu C,Durant JR,Gams RA

    更新日期:1983-12-15 00:00:00

  • The association of embryonal tumors originating in the kidney and in the brain. A report of seven cases.

    abstract::This report documents, in seven infants younger than 2 years of age, a previously unrecognized association of a renal embryonal neoplasm (malignant rhabdoid tumor in six patients and a Wilms' tumor in one) with an embryonal primary tumor originating in the central nervous system. The neuroepithelial tumors included th...

    journal_title:Cancer

    pub_type: 杂志文章

    doi:10.1002/1097-0142(19841115)54:10<2137::aid-cncr282

    authors: Bonnin JM,Rubinstein LJ,Palmer NF,Beckwith JB

    更新日期:1984-11-15 00:00:00

  • Quality of life and survival prediction in terminal cancer patients: a multicenter study.

    abstract:BACKGROUND:It remains unclear whether health-related quality of life (HRQoL) measurements from patients and staff can be combined with medical data to predict survival in patients with terminal cancer. METHODS:The correlations between survival and potential health-related quality-of-life (HRQoL) prognostic variables w...

    journal_title:Cancer

    pub_type: 杂志文章,多中心研究

    doi:10.1002/cncr.20472

    authors: Vigano A,Donaldson N,Higginson IJ,Bruera E,Mahmud S,Suarez-Almazor M

    更新日期:2004-09-01 00:00:00

  • Natural history and therapy of metastatic renal cell carcinoma: the role of interleukin-2.

    abstract:BACKGROUND:Despite significant advances in understanding the biology of renal cell carcinoma (RCC) during the past decade, metastatic disease remains nearly incurable and a major medical challenge. Because RCC is known to be immunogenic, immunotherapeutic agents such as recombinant human interleukin-2 (rIL-2) and inter...

    journal_title:Cancer

    pub_type: 杂志文章,评审

    doi:10.1002/(sici)1097-0142(19971001)80:7<1198::aid-cn

    authors: Bukowski RM

    更新日期:1997-10-01 00:00:00

  • Malignant peripheral neuroectodermal tumors. A retrospective analysis of 42 patients.

    abstract::The clinical presentation of the disease and the results of treatment in 42 patients with malignant peripheral neuroectodermal tumors (MPNT) entered into the Cooperative Ewing's, soft tissue, and neuroblastoma trials of the German Society of Pediatric Oncology were retrospectively analyzed. Within the Ewing's sarcoma ...

    journal_title:Cancer

    pub_type: 杂志文章

    doi:10.1002/1097-0142(19880115)61:2<349::aid-cncr28206

    authors: Jürgens H,Bier V,Harms D,Beck J,Brandeis W,Etspüler G,Gadner H,Schmidt D,Treuner J,Winkler K

    更新日期:1988-01-15 00:00:00

  • Lymphographic demonstration of cyclic changes in lymph node size during Pel-Epstein fever.

    abstract::Pel-Epstein fever cycles, consisting of 1-2 weeks of high fever separated by afebrile periods of the same duration, are classically characteristic of Hodgkin's disease. Clinical observation has determined that the lymph nodes enlarge during periods of fever and reduce in size as the fever subsides. To our knowledge, t...

    journal_title:Cancer

    pub_type: 杂志文章

    doi:10.1002/cncr.2820360916

    authors: Scanlon GT,Castellino RA,Rudders R

    更新日期:1975-12-01 00:00:00

  • Cytologic factors associated with prognosis in patients with peripheral adenocarcinoma of the lung measuring 3 cm or less in greatest dimension.

    abstract:BACKGROUND:Recently, peripheral lung adenocarcinomas (PLA) measuring < or = 3 cm in greatest dimension often have been diagnosed using diagnostic radiology. The objective of the current study was to determine which cytologic factors are associated with a favorable outcome and an unfavorable outcome in patients with PLA...

    journal_title:Cancer

    pub_type: 杂志文章

    doi:10.1002/cncr.20686

    authors: Kobayashi Y,Yokose T,Kawamura K,Iwasaki S,Murata Y,Onuma S,Hasebe T,Nagai K,Sasaki S,Ochiai A

    更新日期:2005-02-25 00:00:00

  • Methylation status of HPV16 E2-binding sites classifies subtypes of HPV-associated oropharyngeal cancers.

    abstract:BACKGROUND:The human papillomavirus (HPV) E2 protein is a transcriptional repressor of the oncogenes E6/E7 and loss of E2 function is considered a key step in carcinogenesis. Integration of HPV into the host genome may disrupt the E2 gene. Furthermore, methylation of CpG dinucleotides in E2-binding sites (E2BSs) in the...

    journal_title:Cancer

    pub_type: 杂志文章

    doi:10.1002/cncr.29315

    authors: Reuschenbach M,Huebbers CU,Prigge ES,Bermejo JL,Kalteis MS,Preuss SF,Seuthe IM,Kolligs J,Speel EJ,Olthof N,Kremer B,Wagner S,Klussmann JP,Vinokurova S,von Knebel Doeberitz M

    更新日期:2015-06-15 00:00:00

  • Comparison of tartrate-resistant acid phosphatase in normal mouse tissues to that in the reticulum cells of leukemic reticuloendotheliosis.

    abstract::A strong activity of the tartrate-resistant acid phosphatase, isoenzyme 5b, was observed in mouse spleen. The enzyme of the mouse spleen had similar electrophoretic mobility and related antigenicity to that of the reticulum cells of leukemic reticuloendotheliosis. Enzyme histochemical studies showed many non-phagocyti...

    journal_title:Cancer

    pub_type: 杂志文章

    doi:10.1002/1097-0142(19810215)47:4<710::aid-cncr28204

    authors: Kuehler D,Lam KW,Yam LT

    更新日期:1981-02-15 00:00:00

  • The epidemiology of cervical carcinogenesis.

    abstract::Epidemiologic and laboratory data suggest that cervical cancer typically arises from a series of causal steps. Each step can be studied separately in the hope of better etiologic understanding and improved cancer prevention. The earliest identified etiologic step is infection of young women with specific types of vene...

    journal_title:Cancer

    pub_type: 杂志文章,评审

    doi:10.1002/1097-0142(19951115)76:10+<1888::aid-cncr28

    authors: Schiffman MH,Brinton LA

    更新日期:1995-11-15 00:00:00

  • Flow cytometric DNA analysis of hepatocellular carcinoma.

    abstract::The prognostic value of nuclear DNA content was studied retrospectively using flow cytometry in 203 cases of resected hepatocellular carcinoma. The occurrence of DNA aneuploidy, which was detected in 50% of patients, correlated significantly with tumor size and the presence of vascular invasion or intrahepatic metasta...

    journal_title:Cancer

    pub_type: 杂志文章

    doi:10.1002/1097-0142(19910215)67:4<939::aid-cncr28206

    authors: Fujimoto J,Okamoto E,Yamanaka N,Toyosaka A,Mitsunobu M

    更新日期:1991-02-15 00:00:00

  • Patient navigation: state of the art or is it science?

    abstract::First implemented in 1990, patient navigation interventions are emerging today as an approach to reduce cancer disparities. However, there is lack of consensus about how patient navigation is defined, what patient navigators do, and what their qualifications should be. Little is known about the efficacy and cost-effec...

    journal_title:Cancer

    pub_type: 杂志文章,评审

    doi:10.1002/cncr.23815

    authors: Wells KJ,Battaglia TA,Dudley DJ,Garcia R,Greene A,Calhoun E,Mandelblatt JS,Paskett ED,Raich PC,Patient Navigation Research Program.

    更新日期:2008-10-15 00:00:00

  • Endometrial adenocarcinoma. A multiparameter clinicopathologic analysis including the DNA profile and the sex steroid hormone receptors.

    abstract::With endometrial adenocarcinoma, several factors, such as stage and histologic grade, are well recognized as having prognostic significance. Other variables, e.g., nuclear grade, probably are also important clinically. A preliminary investigation of the prognostic value of the ploidy, cell cycle kinetics, and sex ster...

    journal_title:Cancer

    pub_type: 杂志文章

    doi:10.1002/1097-0142(19861001)58:7<1518::aid-cncr2820

    authors: Geisinger KR,Homesley HD,Morgan TM,Kute TE,Marshall RB

    更新日期:1986-10-01 00:00:00

  • Effects of melatonin on physical fatigue and other symptoms in patients with advanced cancer receiving palliative care: A double-blind placebo-controlled crossover trial.

    abstract:BACKGROUND:Patients with advanced cancer often experience fatigue and other symptoms that negatively impact their quality of life. The current trial investigated the effect of melatonin on fatigue and other symptoms in patients with advanced cancer. METHODS:Patients who were aged ≥18 years, had a histologically confir...

    journal_title:Cancer

    pub_type: 杂志文章,随机对照试验

    doi:10.1002/cncr.29563

    authors: Lund Rasmussen C,Klee Olsen M,Thit Johnsen A,Petersen MA,Lindholm H,Andersen L,Villadsen B,Groenvold M,Pedersen L

    更新日期:2015-10-15 00:00:00

  • Physical fitness and modifiable cardiovascular disease risk factors in survivors of childhood cancer: A report from the SURfit study.

    abstract:BACKGROUND:Childhood cancer survivors are at risk for cardiovascular disease (CVD) because of intensive cancer therapies often accompanied by an unhealthy lifestyle. This study was aimed at 1) describing modifiable CVD risk factors in survivors and 2) investigating the association between different aspects of physical ...

    journal_title:Cancer

    pub_type: 杂志文章

    doi:10.1002/cncr.33351

    authors: Schindera C,Zürcher SJ,Jung R,Boehringer S,Balder JW,Rueegg CS,Kriemler S,von der Weid NX

    更新日期:2021-01-06 00:00:00

  • How well do medical oncologists' perceptions reflect their patients' reported physical and psychosocial problems? Data from a survey of five oncologists.

    abstract:BACKGROUND:Modern cancer treatments can cure or prolong patients' lives. However, the associated physical and psychosocial problems can detrimentally affect patients' compliance with treatment and, ultimately, their outcomes. Therefore, oncologists need to recognize the problems experienced by their patients and, when ...

    journal_title:Cancer

    pub_type: 杂志文章

    doi:

    authors: Newell S,Sanson-Fisher RW,Girgis A,Bonaventura A

    更新日期:1998-10-15 00:00:00

  • Primitive neuroectodermal tumors after prophylactic central nervous system irradiation in children. Association with an activated K-ras gene.

    abstract::Three patients had supratentorial malignant brain tumors 7 to 9 years after prophylactic central nervous system (CNS) treatment for acute lymphocytic leukemia or malignant T-cell lymphoma. Therapy was administered at the age of 3 to 8 years and included cranial irradiation (total dose, 1800 to 2400 cGy) and intratheca...

    journal_title:Cancer

    pub_type: 杂志文章

    doi:10.1002/1097-0142(19920501)69:9<2385::aid-cncr2820

    authors: Brüstle O,Ohgaki H,Schmitt HP,Walter GF,Ostertag H,Kleihues P

    更新日期:1992-05-01 00:00:00

  • The single palpable thyroid nodule: evaluation by 99mTc-pertechnetate imaging.

    abstract::The role of 99mTc-pertechnetate thyroid imaging in the preoperative assessment of patients with single palpable thyroid nodules was evaluated. The frequency of cancer in hypofunctional nodules was similar to that found in previous studies with 131I. The 99mTc-pertechnetate image allowed a reliable separation of pathol...

    journal_title:Cancer

    pub_type: 杂志文章

    doi:10.1002/1097-0142(197601)37:1<258::aid-cncr2820370

    authors: Alderson PO,Sumner HW,Siegel BA

    更新日期:1976-01-01 00:00:00

  • Screening for cervical disease in mature women: strategies for improvement.

    abstract:BACKGROUND:Cervical carcinoma remains a significant health risk for the older woman. In the current study the yield of screening of mature women in an established, opportunistic screening program was examined. Strategies for improving screening in this age group were identified through examination of recent Pap test hi...

    journal_title:Cancer

    pub_type: 杂志文章

    doi:10.1002/cncr.10723

    authors: Colgan TJ,Clarke A,Hakh N,Seidenfeld A

    更新日期:2002-08-25 00:00:00

  • Metastatic basal cell carcinoma in the era of hedgehog signaling pathway inhibitors.

    abstract:BACKGROUND:Inhibition of the hedgehog signaling pathway (HHSP) for the treatment of locally advanced basal cell carcinoma (BCC) and metastatic BCC (mBCC) has produced promising results. Typically, mBCC is not taken into consideration during the workup of a patient with multifocal metastatic disease who has a history of...

    journal_title:Cancer

    pub_type: 杂志文章,评审

    doi:10.1002/cncr.27532

    authors: Weiss GJ,Korn RL

    更新日期:2012-11-01 00:00:00

  • Cytogenetic findings in liposarcoma correlate with histopathologic subtypes.

    abstract::The cytogenetic findings in 31 liposarcomas from 26 patients are reported. Four other tumors did not grow. Three histologic types are represented in this analysis. The well-differentiated liposarcomas were characterized by telomeric associations, large marker chromosomes and ring chromosomes, and in some cases, double...

    journal_title:Cancer

    pub_type: 杂志文章

    doi:10.1002/1097-0142(19920515)69:10<2484::aid-cncr282

    authors: Sreekantaiah C,Karakousis CP,Leong SP,Sandberg AA

    更新日期:1992-05-15 00:00:00

  • Cisplatin neuropathy. Risk factors, prognosis, and protection by WR-2721.

    abstract::A prospective study of patients receiving cis-diaminedichloroplatin II (DDP) was carried out to determine if risk factors could be identified related to the patient's living habits or past medical history that would predict in which patients DDP neuropathy might develop. Sixty-nine patients receiving six different com...

    journal_title:Cancer

    pub_type: 杂志文章

    doi:10.1002/1097-0142(19880601)61:11<2192::aid-cncr282

    authors: Mollman JE,Glover DJ,Hogan WM,Furman RE

    更新日期:1988-06-01 00:00:00

  • Effectiveness of high-dose MCNU therapy and hematopoietic stem cell autografts treatment of childhood acute leukemia/lymphoma with high-risk features.

    abstract::Clinical and pharmacokinetic studies were performed regarding the toxicity of methyl 6-[3-(2-chloroethyl)-3-nitrosoureido]-6-deoxy-alpha-D-glucopyranoside (MCNU) with other drugs, in conjunction with a peripheral blood stem cell autograft (PBSCT), for treating 26 children with acute leukemia or lymphoma associated wit...

    journal_title:Cancer

    pub_type: 临床试验,杂志文章

    doi:10.1002/1097-0142(19910401)67:7<1830::aid-cncr2820

    authors: Takaue Y,Watanabe T,Hoshi Y,Abe T,Matsunaga K,Saito S,Hirao A,Kawano Y,Ninomiya T,Kuroda Y

    更新日期:1991-04-01 00:00:00

  • A prospective study of immune responsiveness in human melanoma. I. Assessment of initial pretreatment status with stage of disease.

    abstract::The clinical findings in 262 patients with melanoma were correlated with an assessment of their cellular-mediated immunity by delayed-type hypersensitivity (DTH) skin tests, by lymphocyte blastogenesis, and by leukocyte enumerations. Patients with systemic metastases (stage IV) and those with evidence of tumor burden ...

    journal_title:Cancer

    pub_type: 杂志文章

    doi:10.1002/1097-0142(197806)41:6<2165::aid-cncr282041

    authors: Pritchard DJ,Ritts RE Jr,Taylor WF,Miller GC

    更新日期:1978-06-01 00:00:00