Characterization of two low Em forms of cytochrome a3 and their carbon monoxide complexes in mammalian cytochrome c oxidase.

Abstract:

:Evidence is presented for the existence of two forms of low-potential cytochrome a3. One appears to be similar to the low-spin form reported by Nicholls, P., and V. Hildebrandt (1978 Biochem. J. 173:65-72) and Wrigglesworth, J. M., J. Elsden, A. Chapman, N. Van der Water, and M. F. Grahn (1988. Biochim. Biophys. Acta. 936:452-464). It has a reduced Soret peak near 428 nm and a prominent alpha peak near 602 nm. This form is seen when the enzyme is either supplemented with lipoprotein or incorporated into a liposomal membrane, preexposed to a voltage greater than 400 mV for at least 30 min, and titrated in the presence of approximately 1 mM K3Fe(CN)6. The other form has a reduced Soret peak near 446 nm, and no prominent alpha peak. The 428-nm form has an Em near 175 mV and forms a CO complex with an Em near 225 mV. The 446-nm form has an Em near 200 mV and forms a CO complex with an Em near 335 mV.

journal_name

Biophys J

journal_title

Biophysical journal

authors

Sidhu GS,Hendler RW

doi

10.1016/S0006-3495(90)82633-3

subject

Has Abstract

pub_date

1990-06-01 00:00:00

pages

1125-40

issue

6

eissn

0006-3495

issn

1542-0086

pii

S0006-3495(90)82633-3

journal_volume

57

pub_type

杂志文章
  • Time course of activation of calcium release from sarcoplasmic reticulum in skeletal muscle.

    abstract::Myoplasmic free calcium transients were measured with antipyrylazo III in voltage clamped segments of frog skeletal muscle fibers and were used to calculate the rate of release (Rrel) of calcium from the sarcoplasmic reticulum. Intramembrane charge movement was measured for the same pulses in the same fibers. During a...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(88)83050-9

    authors: Simon BJ,Schneider MF

    更新日期:1988-12-01 00:00:00

  • Electrofusion between heterogeneous-sized mammalian cells in a pellet: potential applications in drug delivery and hybridoma formation.

    abstract::High-efficiency electrofusion between cells of different sizes was achieved by application of fusing electric pulses to cells in centrifuged pellets. Larger target cells (Chinese hamster ovary or L1210 cells) were stacked among smaller human erythrocytes or erythrocyte ghosts by sequential centrifugation at 700 g to f...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(96)79249-4

    authors: Li LH,Hensen ML,Zhao YL,Hui SW

    更新日期:1996-07-01 00:00:00

  • Origins of individual swimming behavior in bacteria.

    abstract::Cells in a cloned population of coliform bacteria exhibit a wide range of swimming behaviors--a form of non-genetic individuality. We used computer models to examine the proposition that these variations are due to differences in the number of chemotaxis signaling molecules from one cell to the next. Simulations were ...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(98)77777-X

    authors: Levin MD,Morton-Firth CJ,Abouhamad WN,Bourret RB,Bray D

    更新日期:1998-01-01 00:00:00

  • Swelling of skinned muscle fibers of the frog. Experimental observations.

    abstract::Frog skeletal muscle fibers, mechanically skinned under water-saturated silicone oil, swell upon transfer to aqueous relaxing medium (60 mM KCl; 3 mM MgCl(2); 3 mM ATP; 4 mM EGTA; 20 mM Tris maleate; pH = 7.0; ionic strength 0.15 M). Their cross-sectional areas, estimated with an elliptical approximation, increase 2.3...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(77)85573-2

    authors: Godt RE,Maughan DW

    更新日期:1977-08-01 00:00:00

  • Do All X-ray Structures of Protein-Ligand Complexes Represent Functional States? EPOR, a Case Study.

    abstract::Based on differences between the x-ray crystal structures of ligand-bound and unbound forms, the activation of the erythropoietin receptor (EPOR) was initially proposed to involve a cross-action scissorlike motion. However, the validity of the motions involved in the scissorlike model has been recently challenged. Her...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2016.12.042

    authors: Corbett MSP,Mark AE,Poger D

    更新日期:2017-02-28 00:00:00

  • Molecular packing of cord factor and its interaction with phosphatidylinositol in mixed monolayers.

    abstract::Cord factor (trehalose 6,6'-dimycolate, CF) is a glycolipid located in the outer mycobacterial cell wall that is implicated in the pathogenesis of mycobacteria. Furthermore, CF is a convenient model for studying mycolic acid residues, the major lipid constituents of the mycobacterial cell wall that are believed to for...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(96)79523-1

    authors: Almog R,Mannella CA

    更新日期:1996-12-01 00:00:00

  • Estimation of anisotropic optical parameters of tissue in a slab geometry.

    abstract::The scattering and absorption coefficients of many homogeneous biological tissues such as muscle, skin, white matter in the brain, and dentin are often anisotropically oriented with respect to their bounding interface. In consequence the curves of equal intensity of re-emitted light on the surface of the slab will no ...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.104.058305

    authors: Dudko OK,Weiss GH

    更新日期:2005-05-01 00:00:00

  • Signal Destruction Tunes the Zone of Activation in Spatially Distributed Signaling Networks.

    abstract::Diverse microbial communities coordinate group behaviors through signal exchange, such as the exchange of acyl-homoserine lactones (AHLs) by Gram-negative bacteria. Cellular communication is prone to interference by neighboring microbes. One mechanism of interference is signal destruction through the production of an ...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2017.01.010

    authors: Silva KP,Chellamuthu P,Boedicker JQ

    更新日期:2017-03-14 00:00:00

  • Thermodynamics of long supercoiled molecules: insights from highly efficient Monte Carlo simulations.

    abstract::Supercoiled DNA polymer models for which the torsional energy depends on the total twist of molecules (Tw) are a priori well suited for thermodynamic analysis of long molecules. So far, nevertheless, the exact determination of Tw in these models has been based on a computation of the writhe of the molecules (Wr) by ex...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2015.06.005

    authors: Lepage T,Képès F,Junier I

    更新日期:2015-07-07 00:00:00

  • Molecular motions within the pore of voltage-dependent sodium channels.

    abstract::The pores of ion channel proteins are often modeled as static structures. In this view, selectivity reflects rigidly constrained backbone orientations. Such a picture is at variance with the generalization that biological proteins are flexible, capable of major internal motions on biologically relevant time scales. We...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(97)78096-2

    authors: Bénitah JP,Ranjan R,Yamagishi T,Janecki M,Tomaselli GF,Marban E

    更新日期:1997-08-01 00:00:00

  • Evidence for chaotic behavior in driven ventricles.

    abstract::Toad ventricles were externally driven by periodic pulses while monophasic action potential (MAP) signals were recorded in seven excised and seven in situ ventricles. As the frequency was slowly increased in steps, the stimulated tissue displayed several dynamic characteristics. Hierarchies of periodic behavior, like ...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(89)82673-6

    authors: Savino GV,Romanelli L,González DL,Piro O,Valentinuzzi ME

    更新日期:1989-08-01 00:00:00

  • CFTR: a cysteine at position 338 in TM6 senses a positive electrostatic potential in the pore.

    abstract::We investigated the accessibility to protons and thiol-directed reagents of a cysteine substituted at position 338 in transmembrane segment 6 (TM6) of CFTR to test the hypothesis that T338 resides in the pore. Xenopus oocytes expressing T338C CFTR exhibited pH-dependent changes in gCl and I-V shape that were specific ...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.104.050534

    authors: Liu X,Zhang ZR,Fuller MD,Billingsley J,McCarty NA,Dawson DC

    更新日期:2004-12-01 00:00:00

  • How to make tubular crystals by reconstitution of detergent-solubilized Ca2(+)-ATPase.

    abstract::In an attempt to better define the parameters governing reconstitution and two-dimensional crystallization of membrane proteins, we have studied Ca2(+)-ATPase from rabbit sarcoplasmic reticulum. This ion pump forms vanadate-induced crystals in its native membrane and has previously been reconstituted at high lipid-to-...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(97)78898-2

    authors: Young HS,Rigaud JL,Lacapère JJ,Reddy LG,Stokes DL

    更新日期:1997-06-01 00:00:00

  • Dielectrophoresis and electrorotation of neurospora slime and murine myeloma cells.

    abstract::Dielectrophoresis and electrorotation are commonly used to measure dielectric properties and membrane electrical parameters of biological cells. We have derived quantitative relationships for several critical points, defined in Fig. A 1, which characterize the dielectrophoretic spectrum and the electrorotational spect...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(91)82109-9

    authors: Gimsa J,Marszalek P,Loewe U,Tsong TY

    更新日期:1991-10-01 00:00:00

  • Molecular dynamics simulation of lipid reorientation at bilayer edges.

    abstract::Understanding cellular membrane processes is critical for the study of events such as viral entry, neurotransmitter exocytosis, and immune activation. Supported lipid bilayers are commonly used to model these membrane processes experimentally. Despite the relative simplicity of such a system, many important structural...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.103.029652

    authors: Kasson PM,Pande VS

    更新日期:2004-06-01 00:00:00

  • Change in rigidity in the activated form of the glucose/galactose receptor from Escherichia coli: a phenomenon that will be key to the development of biosensors.

    abstract::Recently a periplasmic glucose/galactose binding protein, GGRQ26C, immobilized on a gold surface has been used as an active part of a glucose biosensor based on quartz microbalance technique. However the nature of the glucose detection was not clear. Here we have found that the receptor protein film immobilized on the...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.105.060442

    authors: Sokolov I,Subba-Rao V,Luck LA

    更新日期:2006-02-01 00:00:00

  • On the wobbling-in-cone analysis of fluorescence anisotropy decay.

    abstract::Interpretation of fluorescence anisotropy decay for the case of restricted rotational diffusion often requires a model. To investigate the extent of model dependence, two models are compared: a strict cone model, in which a fluorescent probe wobbles uniformly within a cone, and a Gaussian model, where the stationary d...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(82)84692-4

    authors: Kinosita K Jr,Ikegami A,Kawato S

    更新日期:1982-02-01 00:00:00

  • NMR dynamics of PSE-4 beta-lactamase: an interplay of ps-ns order and mus-ms motions in the active site.

    abstract::The backbone dynamics for the 29.5 kDa class A beta-lactamase PSE-4 is presented. This solution NMR study was performed using multiple field (15)N spin relaxation and amide exchange data in the EX2 regime. Analysis was carried out with the relax program and includes the Lipari-Szabo model-free approach. Showing simila...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2009.02.068

    authors: Morin S,Gagné SM

    更新日期:2009-06-03 00:00:00

  • Molecular dynamics simulations of the photoactive protein nitrile hydratase.

    abstract::Nitrile hydratase (NHase) is an enzyme used in the industrial biotechnological production of acrylamide. The active site, which contains nonheme iron or noncorrin cobalt, is buried in the protein core at the interface of two domains, alpha and beta. Hydrogen bonds between betaArg-56 and alphaCys-114 sulfenic acid (alp...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.107.116665

    authors: Kubiak K,Nowak W

    更新日期:2008-05-15 00:00:00

  • Compartmentalization of the outer hair cell demonstrated by slow diffusion in the extracisternal space.

    abstract::In the outer hair cell (OHC), the extracisternal space (ECiS) is a conduit and reservoir of the molecular and ionic substrates of the lateral wall, including those necessary for electromotility. To determine the mechanisms through which molecules are transported in the ECiS of the OHC, we selectively imaged the time-d...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2009.06.011

    authors: Gliko O,Saggau P,Brownell WE

    更新日期:2009-08-19 00:00:00

  • Mechanisms of cardiac cell excitation with premature monophasic and biphasic field stimuli: a model study.

    abstract::The mechanisms by which extracellular electric field stimuli induce the (re)excitation of cardiac cells in various stages of refractoriness are still not well understood. We modeled the interactions between an isolated cardiac cell and imposed extracellular electric fields to determine the mechanisms by which relative...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(96)79692-3

    authors: Fishler MG,Sobie EA,Thakor NV,Tung L

    更新日期:1996-03-01 00:00:00

  • The fast tumble signal in bacterial chemotaxis.

    abstract::We have analyzed repellent signal processing in Escherichia coli by flash photorelease of leucine from photolabile precursors. We found that 1). response amplitudes of free-swimming cell populations increased with leucine jump concentration, with an apparent Hill coefficient of 1.3 and a half-maximal dose of 14.4 micr...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.103.033043

    authors: Khan S,Jain S,Reid GP,Trentham DR

    更新日期:2004-06-01 00:00:00

  • The effect of diffusion on the binding of membrane-bound receptors to coated pits.

    abstract::We have formulated a kinetic model for the primary steps that occur at the cell membrane during receptor-mediated endocytosis. This model includes the diffusion of receptor molecules, the binding of receptors to coated pits, the loss of coated pits by invagination, and random reinsertion of receptors and coated pits. ...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(85)83879-0

    authors: Keizer J,Ramirez J,Peacock-López E

    更新日期:1985-01-01 00:00:00

  • Monolayers of a model anesthetic-binding membrane protein: formation, characterization, and halothane-binding affinity.

    abstract::hbAP0 is a model membrane protein designed to possess an anesthetic-binding cavity in its hydrophilic domain and a cation channel in its hydrophobic domain. Grazing incidence x-ray diffraction shows that hbAP0 forms four-helix bundles that are vectorially oriented within Langmuir monolayers at the air-water interface....

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.105.072348

    authors: Churbanova IY,Tronin A,Strzalka J,Gog T,Kuzmenko I,Johansson JS,Blasie JK

    更新日期:2006-05-01 00:00:00

  • Quantal sarcomere-length changes in relaxed single myofibrils.

    abstract::We carried out experiments on single isolated myofibrils in which thin filaments had been functionally removed, leaving the connecting (titin) filaments as the sole agent taking up the length change. With technical advances that gave sub-nanometer detectability we examined the time course of single sarcomere-length ch...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(01)75766-9

    authors: Blyakhman F,Tourovskaya A,Pollack GH

    更新日期:2001-08-01 00:00:00

  • Thermodynamic Modeling of the Statistics of Cell Spreading on Ligand-Coated Elastic Substrates.

    abstract::Biological spread cells exist in a perpetually fluctuating state and therefore cannot be described in terms of a unique deterministic system. For modeling approaches to provide novel insight and uncover new mechanisms that drive cell behavior, a framework is required that progresses from traditional deterministic meth...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2018.11.007

    authors: McEvoy E,Shishvan SS,Deshpande VS,McGarry JP

    更新日期:2018-12-18 00:00:00

  • Tetraethylammonium block of the BNC1 channel.

    abstract::The brain Na+ channel-1 (BNC1, also known as MDEG1 or ASIC2) is a member of the DEG/ENaC cation channel family. Mutation of a specific residue (Gly430) that lies N-terminal to the second membrane-spanning domain activates BNC1 and converts it from a Na+-selective channel to one permeable to both Na+ and K+. Because al...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(99)77299-1

    authors: Adams CM,Price MP,Snyder PM,Welsh MJ

    更新日期:1999-03-01 00:00:00

  • A microscopic multiphase diffusion model of viable epidermis permeability.

    abstract::A microscopic model of passive transverse mass transport of small solutes in the viable epidermal layer of human skin is formulated on the basis of a hexagonal array of cells (i.e., keratinocytes) bounded by 4-nm-thick, anisotropic lipid bilayers and separated by 1-μm layers of extracellular fluid. Gap junctions and t...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2013.03.056

    authors: Nitsche JM,Kasting GB

    更新日期:2013-05-21 00:00:00

  • A semiquantitative theory of synaptic vesicle movements.

    abstract::Under the assumption that vesicles are the anatomic correlate of quantal release, the forces governing the movement of synaptic vesicles inside neurons are analyzed. Semiquantitative calculations are presented to show that a diffuse layer field penetrates a few Debye lengths into the axoplasm. This field binds tightly...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(73)85973-9

    authors: Remler MP

    更新日期:1973-02-01 00:00:00

  • Chloride channels of glycine and GABA receptors with blockers: Monte Carlo minimization and structure-activity relationships.

    abstract::GABA and glycine receptors (GlyRs) are pentameric ligand-gated ion channels that respond to the inhibitory neurotransmitters by opening a chloride-selective central pore lined with five M2 segments homologous to those of alpha(1) GlyR/ ARVG(2')LGIT(6')TVLTMTTQSSGSR. The activity of cyanotriphenylborate (CTB) and picro...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(00)76729-4

    authors: Zhorov BS,Bregestovski PD

    更新日期:2000-04-01 00:00:00