Affinity of aporphines for the human 5-HT2A receptor: insights from homology modeling and molecular docking studies.

Abstract:

:Analogs of nantenine were docked into a modeled structure of the human 5-HT(2A) receptor using ICM Pro, GLIDE, and GOLD docking methods. The resultant docking scores were used to correlate with observed in vitro apparent affinity (K(e)) data. The GOLD docking algorithm when used with a homology model of 5-HT(2A), based on a bovine rhodopsin template and built by the program MODELLER, gives results which are most in agreement with the in vitro results. Further analysis of the docking poses among members of a C1 alkyl series of nantenine analogs, indicate that they bind to the receptor in a similar orientation, but differently than nantenine. Besides an important interaction between the protonated nitrogen of the C1 alkyl analogs and residue Asp155, we identified Ser242, Phe234, and Gly238 as key residues responsible for the affinity of these compounds for the 5-HT(2A) receptor. Specifically, the ability of some of these analogs to establish a H-bond with Ser242 and hydrophobic interactions with Phe234 and Gly238 appears to explain their enhanced affinity as compared to nantenine.

journal_name

Bioorg Med Chem

authors

Pecic S,Makkar P,Chaudhary S,Reddy BV,Navarro HA,Harding WW

doi

10.1016/j.bmc.2010.06.043

subject

Has Abstract

pub_date

2010-08-01 00:00:00

pages

5562-75

issue

15

eissn

0968-0896

issn

1464-3391

pii

S0968-0896(10)00571-7

journal_volume

18

pub_type

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