Development, evaluation and application of tripeptidyl-peptidase II sequence signatures.

Abstract:

:Tripeptidyl-peptidase II (TPP II) is a cytosolic peptidase that has been implicated in fat formation and cancer, apparently independent of the enzymatic activity. In search for alternative functional regions, conserved motifs were identified and eleven signatures were constructed. Seven of the signatures covered previously investigated residues, whereas the functional importance of the other motifs is unknown. This provides directions for future investigations of alternative activities of TPP II. The obtained signatures provide an efficient bioinformatic tool for the identification of TPP II homologues. Hence, a TPP II sequence homologue from fission yeast, Schizosaccharomyces pombe, was identified and demonstrated to encode the TPP II-like protein previously reported as multicorn. Furthermore, an homologous protein was found in the prokaryote Blastopirellula marina, albeit the TPP II function was apparently not conserved. This gene is probably the result of a rare gene transfer from eukaryote to prokaryote.

journal_name

Arch Biochem Biophys

authors

Eriksson S,Gutiérrez OA,Bjerling P,Tomkinson B

doi

10.1016/j.abb.2009.01.007

subject

Has Abstract

pub_date

2009-04-01 00:00:00

pages

39-45

issue

1

eissn

0003-9861

issn

1096-0384

pii

S0003-9861(09)00005-8

journal_volume

484

pub_type

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