Ever deeper phylogeographies: trees retain the genetic imprint of Tertiary plate tectonics.

abstract：:Detailed evaluations of genomic variation between sister species often reveal distinct chromosomal regions of high relative differentiation (i.e., "islands of differentiation" in FST ), but there is much debate regarding the causes of this pattern. We briefly review the prominent models of genomic islands of different...

journal_title：Molecular ecology

authors： Irwin DE,Milá B,Toews DPL,Brelsford A,Kenyon HL,Porter AN,Grossen C,Delmore KE,Alcaide M,Irwin JH

更新日期：2018-12-01 00:00:00

abstract：:Currently, there is much debate on the genetic architecture of quantitative traits in wild populations. Is trait variation influenced by many genes of small effect or by a few genes of major effect? Where is additive genetic variation located in the genome? Do the same loci cause similar phenotypic variation in differ...

journal_title：Molecular ecology

authors： Santure AW,Poissant J,De Cauwer I,van Oers K,Robinson MR,Quinn JL,Groenen MA,Visser ME,Sheldon BC,Slate J

更新日期：2015-12-01 00:00:00

abstract：:Ribosomal DNA (rDNA) copy number variation (CNV) has major physiological implications for all organisms, but how it varies for fungi, an ecologically ubiquitous and important group of microorganisms, has yet to be systemically investigated. Here, we examine rDNA CNV using an in silico read depth approach for 91 fungal...

journal_title：Molecular ecology

authors： Lofgren LA,Uehling JK,Branco S,Bruns TD,Martin F,Kennedy PG

更新日期：2019-02-01 00:00:00

abstract：:Photosynthetic tissues, the major food source of many invertebrates and vertebrates, are well defended. Many defence traits in leaves are controlled via the jasmonate signalling pathway in which jasmonate acts as a hormone by binding to a receptor to activate responses that lead to increased resistance to invertebrate...

journal_title：Molecular ecology

authors： Mafli A,Goudet J,Farmer EE

更新日期：2012-05-01 00:00:00

abstract：:Pelophylax esculentus is a hybridogenetic frog originating from matings between P. ridibundus (RR) and P. lessonae (LL). Typically, diploid hybrids (LR) live in sympatry with one of their parental species, upon which they depend for successful reproduction. In parts of their range, however, pure hybrid populations can...

journal_title：Molecular ecology

authors： Arioli M,Jakob C,Reyer HU

更新日期：2010-05-01 00:00:00

abstract：:We examined the consequences of barriers, stream architecture and putative dispersal capability on levels of genetic differentiation among populations of the freshwater fish Craterocephalus stercusmuscarum. Seven polymorphic allozyme loci and sequences of a 498-bp fragment of the ATPase 6 mitochondrial DNA (mtDNA) gen...

journal_title：Molecular ecology

authors： McGlashan DJ,Hughes JM

更新日期：2000-11-01 00:00:00

abstract：:Knowledge of the role of landscapes in shaping genetic connectivity and divergence is essential for understanding patterns of biogeography and diversity. This is particularly relevant for the Andes region, a major biodiversity hotspot of relatively recent origin. We examined the phylogeography and landscape genetics o...

journal_title：Molecular ecology

authors： Trénel P,Hansen MM,Normand S,Borchsenius F

更新日期：2008-08-01 00:00:00

abstract：:The research objectives were to determine aspects of the population dynamics relevant to effective monitoring of gene flow in the soybean crop complex in Japan. Using 20 microsatellite primers, 616 individuals from 77 wild soybean (Glycine soja) populations were analysed. All samples were of small seed size (< 0.03 g)...

journal_title：Molecular ecology

authors： Kuroda Y,Kaga A,Tomooka N,Vaughan DA

更新日期：2006-04-01 00:00:00

abstract：:Allopolyploidization, that is, concomitant merging and doubling of two or more divergent genomes in a common nucleus/cytoplasm, is known to instantly alter genomewide transcriptome dynamics, a phenomenon referred to as "transcriptomic shock." However, the immediate effects of transcriptomic alteration in generating ph...

journal_title：Molecular ecology

authors： Sun Y,Wu Y,Yang C,Sun S,Lin X,Liu L,Xu C,Wendel JF,Gong L,Liu B

更新日期：2017-10-01 00:00:00

abstract：:The evolution of incompatibilities between eggs and sperm is thought to play important roles in establishing and maintaining reproductive isolation among species of broadcast-spawning marine invertebrates. However, the effectiveness of gametic isolation in initiating the speciation process and/or in limiting the intro...

journal_title：Molecular ecology

authors： Addison JA,Pogson GH

更新日期：2009-03-01 00:00:00

abstract：:Recent advances in molecular biology and bioinformatics have helped to unveil striking and previously unrecognized patterns of geographic genetic structure in marine populations. Largely driven by the pressing needs of fisheries management and conservation, studies on marine fish populations have played a pivotal role...

journal_title：Molecular ecology

authors： Sala-Bozano M,Ketmaier V,Mariani S

更新日期：2009-12-01 00:00:00

abstract：:Ecologists are increasingly interested in quantifying consumer diets based on food DNA in dietary samples and high-throughput sequencing of marker genes. It is tempting to assume that food DNA sequence proportions recovered from diet samples are representative of consumer's diet proportions, despite the fact that capt...

journal_title：Molecular ecology

authors： Thomas AC,Jarman SN,Haman KH,Trites AW,Deagle BE

更新日期：2014-08-01 00:00:00

abstract：:Host specialization is a key process in ecological divergence and speciation of plant-associated fungi. The underlying determinants of host specialization are generally poorly understood, especially in endophytes, which constitute one of the most abundant components of the plant microbiome. We addressed the genetic ba...

journal_title：Molecular ecology

authors： Schirrmann MK,Zoller S,Croll D,Stukenbrock EH,Leuchtmann A,Fior S

更新日期：2018-08-01 00:00:00

abstract：:Both historical and contemporary processes influence the genetic structure of species, but the relative roles of such processes are still difficult to access. Population genetic studies of species with recent evolutionary histories such as the New Zealand endemic scallop Pecten novaezelandiae (<1 Ma) permit testing of...

journal_title：Molecular ecology

authors： Silva CN,Gardner JP

更新日期：2015-11-01 00:00:00

abstract：:Aquifers, springs and other groundwater-dependent ecosystems are threatened by urban land use, which causes water quality deterioration through nutrient loading, sewage infiltration, groundwater extraction and, along coasts, seawater intrusion. The presence of certain microbes in groundwater can indicate that an aquif...

journal_title：Molecular ecology

authors： Scharping RJ,Garey JR

更新日期：2020-10-28 00:00:00

abstract：:The relatedness structure of animal populations is thought to be a critically important factor underlying the evolution of mating systems and social behaviours. While previous work has shown that population structure is shaped by many biological processes, few studies have investigated how these factors vary over time...

journal_title：Molecular ecology

authors： Nichols HJ,Jordan NR,Jamie GA,Cant MA,Hoffman JI

更新日期：2012-11-01 00:00:00

abstract：:Future climate scenarios predict changes in rainfall regimes. These changes are expected to affect plants via effects on the expression of root traits associated with water and nutrient uptake. Associated microorganisms may also respond to these new precipitation regimes, either directly in response to changes in the ...

journal_title：Molecular ecology

authors： Deveautour C,Donn S,Power SA,Bennett AE,Powell JR

更新日期：2018-04-01 00:00:00

abstract：:We used behavioural observations and mitochondrial DNA (mtDNA) sequence analysis to examine demographic and genetic structure within and among home-range groups of desert bighorn sheep (Ovis canadensis) ewes in the Peninsular Ranges of southern California, USA. We identified substantial genetic variation in the first ...

journal_title：Molecular ecology

authors： Boyce WM,Ramey RR 2nd,Rodwell TC,Rubin ES,Singer RS

更新日期：1999-01-01 00:00:00

abstract：:Understanding the pattern of connectivity among populations is crucial for the development of realistic and spatially explicit population models in marine systems. Here we analysed variation at eight microsatellite loci to assess the genetic structure and to infer patterns of larval dispersal for a brooding coral, Ser...

journal_title：Molecular ecology

authors： Underwood JN,Smith LD,Van Oppen MJ,Gilmour JP

更新日期：2007-02-01 00:00:00

abstract：:Sexual selection may facilitate genetic isolation among populations and result in increased rates of diversification. As a mechanism driving diversification, sexual selection has been invoked and upheld in numerous empirical studies across disparate taxa, including birds, plants and spiders. In this study, we investig...

journal_title：Molecular ecology

authors： Chakrabarty P,Davis MP,Smith WL,Baldwin ZH,Sparks JS

更新日期：2011-07-01 00:00:00

abstract：:The ecological and evolutionary importance of fine-scale genetic structure within populations is increasingly appreciated. However, available data are largely restricted to wild vertebrates and eusocial insects. In addition, there is the expectation that most insects tend to have such large- and high-density populatio...

journal_title：Molecular ecology

authors： Bretman A,Rodríguez-Muñoz R,Walling C,Slate J,Tregenza T

更新日期：2011-07-01 00:00:00

abstract：:We studied population polymorphism at a major histocompatibility complex (MHC) class II beta gene in the deer mouse (Peromyscus maniculatus). We found that: (i) a single population of P. maniculatus has significantly higher levels of DNA and protein sequence diversity than worldwide samples from homologous genes in ot...

journal_title：Molecular ecology

authors： Richman AD,Herrera LG,Nash D

更新日期：2001-12-01 00:00:00

abstract：:Microcystins (MCs) are toxic heptapeptides that are produced by filamentous cyanobacteria Planktothrix rubescens and Planktothrix agardhii via nonribosomal peptide synthesis. MCs share a common structure cyclo (-D-Alanine(1)-L-X(2)- D-erythro-beta-iso-aspartic acid(3)-L-Z(4)-Adda(5)-D-Glutamate(6)- N-methyl-dehydroala...

journal_title：Molecular ecology

authors： Kurmayer R,Gumpenberger M

更新日期：2006-10-01 00:00:00

abstract：:In lichen symbiosis, fungal and algal partners form close associations, often codispersed by vegetative propagules. Due to the particular interdependence, processes such as colonization, dispersal or genetic drift are expected to result in congruent patterns of genetic structure in the symbionts. To study the populati...

journal_title：Molecular ecology

authors： Widmer I,Dal Grande F,Excoffier L,Holderegger R,Keller C,Mikryukov VS,Scheidegger C

更新日期：2012-12-01 00:00:00

abstract：:Genetic variation supplies the raw material for adaptation, evolution and survival of populations and has therefore been a key focus of conservation biology ever since its foundation (Soulé 1985). In previous decades, the neutral component of genetic diversity (generated by mutation and shaped by drift) has been the s...

journal_title：Molecular ecology

authors： Ficetola GF,Bonin AL

更新日期：2011-04-01 00:00:00

abstract：:We investigated range-wide phylogeographic variation in three European ash species (Fraxinus sp., Oleaceae). Chloroplast DNA (cpDNA) microsatellites were typed in the thermophilous Fraxinus angustifolia and Fraxinus ornus and the observed haplotypes and the geographic distribution of diversity were compared to cpDNA d...

journal_title：Molecular ecology

authors： Heuertz M,Carnevale S,Fineschi S,Sebastiani F,Hausman JF,Paule L,Vendramin GG

更新日期：2006-07-01 00:00:00

abstract：:One of the most striking and consistent results in speciation genomics is the heterogeneous divergence observed across the genomes of closely related species. This pattern was initially attributed to different levels of gene exchange-with divergence preserved at loci generating a barrier to gene flow but homogenized a...

journal_title：Molecular ecology

authors： Field DL,Fraïsse C

更新日期：2019-04-01 00:00:00

abstract：:Genetic differentiation in thermal adaptation can result from a trade-off between the performance of organisms across different temperatures or from the accumulation of deleterious mutations. In this experiment, we assayed thermal sensitivity of 138 genetically distinct Mycosphaerella graminicola isolates sampled from...

journal_title：Molecular ecology

authors： Zhan J,McDonald BA

更新日期：2011-04-01 00:00:00

abstract：:The temperature stress that pelagic fishes experience can induce physiological and behavioural changes that leave a signature in gene expression profiles. We used a functional genomics approach to identify genes that were up- or down-regulated following thermal stress in the Pacific bluefin tuna. Following the acclima...

journal_title：Molecular ecology

authors： Castilho PC,Buckley BA,Somero G,Block BA

更新日期：2009-05-01 00:00:00

abstract：:Introduced species can threaten native taxa in multiple ways, including competition and hybridization, which can reduce fitness, alter ecological niches or swamp native genomes. Encroachment and hybridization by introduced species also provide opportunities to study the dynamics of invasiveness and hybridization durin...

journal_title：Molecular ecology

authors： Sacks BN,Moore M,Statham MJ,Wittmer HU

更新日期：2011-01-01 00:00:00