Abstract:
:Brownian Dynamics (BD) computer simulations were used to study electrostatic interactions between turnip cytochrome f (cyt f) and spinach plastocyanin (PC). Three different spinach PC structures were studied: The X-ray crystal structure of Xue and coworkers [(1998) Protein Sci 7:2099-2105] and the NMR structure of Musiani et al. [(2005) J Biol Chem 280:18833-18841] and Ubbink and co-workers [(1998) Structure 6:323-335]. Significant differences exist in the backbone conformation between the PC taken from Ubbink and coworkers and the other two PC structures particularly the regions surrounding G10, E59-E60, and D51. Complexes formed in BD simulations using the PC of Ubbink and colleagues had a smaller Cu-Fe distance than the other two. These results suggest that different PC conformations may exist in solution with different capabilities of forming electron-transfer-active docks. All three types of complexes show electrostatic contacts between D42, E43, and D44 on PC and K187 on cyt f as well as between E59 on PC and K58 on cyt f. However, the PC of Ubbink and coworkers reveals additional contacts between D51 and cyt f as a result of the difference in backbone configuration. A second minor complex component was observed for the PC of Ubbink and co-workers and Xue and co-workers which had contacts between K187 on cyt f and E59 and E60 on PC rather than between K187 on cyt f and D42-D44 on PC as observed for the major components. This second type of complex may represent an earlier complex which rearranges to form a final complex capable of electron transfer.
journal_name
Photosynth Resjournal_title
Photosynthesis researchauthors
Gross ELdoi
10.1007/s11120-007-9192-ysubject
Has Abstractpub_date
2007-11-01 00:00:00pages
411-22issue
2-3eissn
0166-8595issn
1573-5079journal_volume
94pub_type
杂志文章abstract::This review focuses on our recent efforts in synthetic ruthenium-tyrosine-manganese chemistry mimicking the donor side reactions of Photosystem II. Tyrosine and tryptophan residues were linked to ruthenium photosensitizers, which resulted in model complexes for proton-coupled electron transfer from amino acids. A new ...
journal_title:Photosynthesis research
pub_type: 杂志文章,评审
doi:10.1007/s11120-005-9005-0
更新日期:2006-01-01 00:00:00
abstract::The xanthophyll cycle represents one of the important photoprotection mechanisms in plant cells. In the present review, we summarize current knowledge about the violaxanthin cycle of vascular plants, green and brown algae, and the diadinoxanthin cycle of the algal classes Bacillariophyceae, Xanthophyceae, Haptophyceae...
journal_title:Photosynthesis research
pub_type: 杂志文章,评审
doi:10.1007/s11120-010-9536-x
更新日期:2010-11-01 00:00:00
abstract::The light response curves of the acceptor and donor side mechanisms of photoinhibition of Photosystem II were calculated, using Arabidopsis as a model organism. Acceptor-side photoinhibition was modelled as double reduction of QA, noting that non-photochemical quenching has the same effect on the quantum yield of QA d...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/s11120-004-7174-x
更新日期:2005-06-01 00:00:00
abstract::The linear, four-step oxidation of water to molecular oxygen by photosystem II requires cooperation between redox reactions driven by light and a set of redox reactions involving the S-states within the oxygen-evolving complex. The oxygenevolving complex is a highly ordered structure in which a number of polypeptides ...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/BF00037001
更新日期:1985-01-01 00:00:00
abstract::After a brief prologue on Otto Kandler's life, we describe briefly his pioneering work on photosynthesis (photophosphorylation and the carbon cycle) and his key participation in the discovery of the concept of three forms of life (Archaea, Prokarya, and Eukarya). With Otto Kandler's passing, both the international pho...
journal_title:Photosynthesis research
pub_type: 传,历史文章,杂志文章
doi:10.1007/s11120-018-0530-z
更新日期:2018-09-01 00:00:00
abstract::Rubisco (ribulose-1,5-bisphosphate carboxylase/oxygenase) catalyzes carboxylation of ribulose-1,5-bisphosphate, the first in a series of reactions leading to the incorporation of atmospheric CO₂ into biomass. Rubisco requires Rubisco activase (RCA), an AAA+ ATPase that reactivates Rubisco by remodelling the conformati...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/s11120-013-9964-5
更新日期:2014-03-01 00:00:00
abstract::The kinetic and spectroscopic properties of the secondary electron acceptor A1 were determined by flash absorption spectroscopy at room and cryogenic temperatures in a Photosystem I (PS I) core devoid of the iron-sulfur clusters FX, FB and FA. It was shown earlier (Warren, P.V., Golbeck, J.H. and Warden, J.T. (1993) B...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/BF00015559
更新日期:1995-09-01 00:00:00
abstract::Cyanobacteria are photosynthetic prokaryotes and widely used for photosynthetic research as model organisms. Partly due to their prokaryotic nature, however, estimation of photosynthesis by chlorophyll fluorescence measurements is sometimes problematic in cyanobacteria. For example, plastoquinone pool is reduced in th...
journal_title:Photosynthesis research
pub_type: 杂志文章,评审
doi:10.1007/s11120-017-0367-x
更新日期:2017-09-01 00:00:00
abstract::Two portable instruments, designed to evaluate epidermal UV screening in leaves, were compared: the Dualex and the UV-A-PAM fluorimeter. Both instruments excite chlorophyll fluorescence at the same UV wavelengths but reference excitation is in the red and the blue spectral range in the former and the latter fluorimete...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/s11120-007-9135-7
更新日期:2007-07-01 00:00:00
abstract::Chlorophyll fluorescence imaging has been used to analyse the response elicited in Phaseolus vulgaris after inoculation with Pseudomonas syringae pv. phaseolicola 1448A (compatible interaction) and P. syringae pv. tomato DC3000 (incompatible interaction). With the aim of modulating timing of symptom development, diffe...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/s11120-007-9278-6
更新日期:2008-04-01 00:00:00
abstract::The three major chlorophyll-proteins of spinach chloroplasts were solubilized with digitonin and isolated by electrophoresis with deoxycholate. The gel bands were identified from their absorption and fluorescence spectra measured at 77 K. The slowest moving band was a Photosystem I complex (CPI); the second, a Photosy...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/BF00054145
更新日期:1983-12-01 00:00:00
abstract::Ongoing work has led to the identification of most of the biochemical steps in carotenoid biosynthesis in chlorophototrophic bacteria. In carotenogenesis, a relatively small number of modifications leads to a great diversity of carotenoid structures. This review examines the individual steps in the pathway, discusses ...
journal_title:Photosynthesis research
pub_type: 杂志文章,评审
doi:10.1007/s11120-008-9312-3
更新日期:2008-08-01 00:00:00
abstract::The engagement of different photoprotective mechanisms in the cells of the carotenogenic astaxanthin-accumulating chlorophyte Haematococcus pluvialis (i) under favorable conditions, (ii) in the course of stress-induced haematocyst formation and (iii) during recovery from the stress was studied. To this end, we followe...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/s11120-016-0246-x
更新日期:2016-06-01 00:00:00
abstract::Soybean [Glycine max (L.) Merr. cv. Williams 82 and A3127] plants were grown in the field under long-term soil moisture deficit and irrigation to determine the effects of severe drought stress on the photosynthetic capacity of soybean leaves. Afternoon leaf water potentials, stomatal conductances, intercellular CO2 co...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/BF00051735
更新日期:1990-07-01 00:00:00
abstract::Using a novel, pulsed micro-second time-resolved photoacoustic (PA) instrument, we measured thermal dissipation and energy storage (ES) in the intact cells of wild type (WT) Chlamydomonas reinhardtii, and mutants lacking either PSI or PSII reaction centers (RCs). On this time scale, the kinetic contributions of the th...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/s11120-011-9682-9
更新日期:2011-09-01 00:00:00
abstract::C3 carbon fixation has a bad reputation, primarily because it is associated with photorespiration, a biochemical pathway thought to waste a substantial amount of the carbohydrate produced in a plant. This review presents evidence collected over nearly a century that (1) Rubisco when associated with Mn(2+) generates ad...
journal_title:Photosynthesis research
pub_type: 杂志文章,评审
doi:10.1007/s11120-014-0056-y
更新日期:2015-02-01 00:00:00
abstract::A chloroplast preparation was extracted from squash (Cucurbita pepo (L.) var. Senator). Enrichment of intact chloroplasts was achieved by continuous free-flow electrophoresis. The addition of monoterpenes, detergent and free fatty acids changed the elecrophoretic separation pattern characteristically. Monoterpene-depe...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/BF00054124
更新日期:1991-06-01 00:00:00
abstract::Time-resolved (TR) infrared (IR) spectroscopy in the nanosecond to second timescale has been extensively used, in the last 30 years, in the study of photosynthetic systems. Interesting results have also been obtained at lower time resolution (minutes or even hours). In this review, we first describe the used technique...
journal_title:Photosynthesis research
pub_type: 杂志文章,评审
doi:10.1007/s11120-016-0305-3
更新日期:2017-02-01 00:00:00
abstract::The world is facing energy crisis and environmental issues due to the depletion of fossil fuels and increasing CO2 concentration in the atmosphere. Growing microalgae can contribute to practical solutions for these global problems because they can harvest solar energy and capture CO2 by converting it into biofuel usin...
journal_title:Photosynthesis research
pub_type: 杂志文章,评审
doi:10.1007/s11120-013-9828-z
更新日期:2013-11-01 00:00:00
abstract::In appreciation of his contribution to the Photosystsem II research and commemoration of the book Photosystem II: The Light-Driven Water-Plastoquinone Oxido-Reductase, co-edited with Kimiyuki Satoh, I present here some of my recollections of Thomas John Wydrzynski and by several others with whom he has associated over...
journal_title:Photosynthesis research
pub_type: 传,历史文章,杂志文章
doi:10.1007/s11120-008-9341-y
更新日期:2008-10-01 00:00:00
abstract::The oxygen production of dark-adapted Photosystem II upon illumination by a series of single-turnover flashes shows a damped period four oscillation with flash number. The damping is attributed to 'misses' resulting from a statistical probability that a reaction center fails to produce a stable charge separation after...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1023/A:1016128632704
更新日期:2002-01-01 00:00:00
abstract::Quantum mechanics/molecular mechanics (QM/MM) hybrid methods are currently the most powerful computational tools for studies of structure/function relations and structural refinement of macrobiomolecules (e.g., proteins and nucleic acids). These methods are highly efficient, since they implement quantum chemistry tech...
journal_title:Photosynthesis research
pub_type: 杂志文章,评审
doi:10.1007/s11120-009-9467-6
更新日期:2009-11-01 00:00:00
abstract::Chlorophyll f is a photosynthetic pigment that was discovered in 2010. In this study, we present investigations on spectral and dynamic characteristics of singlet-excited and triplet states of Chl f with the application of ultrafast time-resolved absorption and fluorescence spectroscopies. The pigment was studied at r...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/s11120-014-9981-z
更新日期:2014-07-01 00:00:00
abstract::In many ways, the 1963 conference at Airlie House was an unusual event. The meeting convincingly demonstrated that photosynthetic research, previously reported mostly at conferences of botany and/or plant physiology, had become an independent and important field of biological research. New techniques had been develope...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1023/B:PRES.0000030427.35645.5c
更新日期:2004-01-01 00:00:00
abstract::A study of the absorption and fluorescence characteristics of the D1/D2/cytb-559 reaction centre complex of Photosystem II has been carried out by gaussian decomposition of absorption spectra both at room temperature and 72 K and of the room temperature fluorescence spectrum. A five component fit was found in which th...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/BF02183048
更新日期:1994-09-01 00:00:00
abstract::The cyanobacterial small CAB-like proteins (SCPs) are one-helix proteins with compelling similarity to the first and third transmembrane helix of proteins belonging to the CAB family of light-harvesting complex proteins in plants. The SCP proteins are transiently expressed at high light intensity and other stress cond...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/s11120-007-9244-3
更新日期:2008-02-01 00:00:00
abstract::In vitro studies of the carotenoid peridinin, which is the primary pigment from the peridinin chlorophyll-a protein (PCP) light harvesting complex, showed a strong dependence on the lifetime of the peridinin lowest singlet excited state on solvent polarity. This dependence was attributed to the presence of an intramol...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/s11120-005-1447-x
更新日期:2005-11-01 00:00:00
abstract::In studies on photosynthetic systems it is common practice to interpret the results of time-resolved fluorescence experiments on the basis of compartmental, or target, models. Each compartment represents a group of molecules with similar fluorescence characteristics. In cases of practical interest, the members of each...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/BF00014883
更新日期:1996-11-01 00:00:00
abstract::P700 enriched fractions were isolated from two brown algae and one diatom using sucrose density centrifugation after digitinin solubilization. They had a Chl a/P700 ratio of about 250 to 375 according to the species, they were enriched in long-wavelength absorbing Chl a and exhibited a fluorescence emission maximum at...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/BF00035009
更新日期:1990-02-01 00:00:00
abstract::Far-red light photoacclimation (FaRLiP) is a mechanism that allows some cyanobacteria to utilize far-red light (FRL) for oxygenic photosynthesis. During FaRLiP, cyanobacteria remodel photosystem (PS) I, PS II, and phycobilisomes while synthesizing Chl d, Chl f, and far-red-absorbing phycobiliproteins, and these change...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/s11120-016-0309-z
更新日期:2017-02-01 00:00:00