Rho GTPase signaling in Dictyostelium discoideum: insights from the genome.

Abstract:

:Rho GTPases are ubiquitously expressed across the eukaryotes where they act as molecular switches participating in the regulation of many cellular processes. We present an inventory of proteins involved in Rho-regulated signaling pathways in Dictyostelium discoideum that have been identified in the completed genome sequence. In Dictyostelium the Rho family is encoded by 18 genes and one pseudogene. Some of the Rho GTPases (Rac1a/b/c, RacF1/F2 and RacB) are members of the Rac subfamily, and one, RacA, belongs to the RhoBTB subfamily. The Cdc42 and Rho subfamilies, characteristic of metazoa and fungi, are absent. The activities of these GTPases are regulated by two members of the RhoGDI family, by eight members of the Dock180/zizimin family and by a surprisingly large number of proteins carrying RhoGEF (42 genes) or RhoGAP (43 genes) domains or both (three genes). Most of these show domain compositions not found in other organisms, although some have clear homologs in metazoa and/or fungi. Among the (in many cases putative) effectors found in Dictyostelium are the CRIB domain proteins (WASP and two related proteins, eight PAK kinases and a novel gelsolin-related protein), components of the Scar/WAVE complex, 10 formins, four IQGAPs, two members of the PCH family, numerous lipid kinases and phospholipases, and components of the NADPH oxidase and the exocyst complexes. In general, the repertoire of Rho signaling components of Dictyostelium is similar to that of metazoa and fungi.

journal_name

Eur J Cell Biol

authors

Vlahou G,Rivero F

doi

10.1016/j.ejcb.2006.04.011

subject

Has Abstract

pub_date

2006-09-01 00:00:00

pages

947-59

issue

9-10

eissn

0171-9335

issn

1618-1298

pii

S0171-9335(06)00081-1

journal_volume

85

pub_type

杂志文章,评审
  • The coincident distribution of calcium-rich membranes and kinetochore fibers at metaphase in living endosperm cells of Haemanthus.

    abstract::We have coupled chlorotetracycline (CTC) fluorescence with polarized light microscopic observations of living mitotic endosperm cells of Haemanthus in order to compare the spatial distributions of Ca2+-rich endomembranes in the spindle with that of the kinetochore fibers during metaphase. In either control cells or in...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:

    authors: Wolniak SM,Hepler PK,Jackson WT

    更新日期:1981-08-01 00:00:00

  • Chicken macrophages synthesize and secrete avidin in culture.

    abstract::It was previously shown that avidin, a glycoprotein secreted in vivo by chicken oviduct, is produced by cultured transformed or damaged chicken embryo fibroblasts [27]. This report demonstrates synthesis and secretion of large amounts of avidin by macrophages isolated from chicken yolk sac. Avidin was secreted to the ...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:

    authors: Korpela J

    更新日期:1984-01-01 00:00:00

  • Actin and tubulin cytoskeletons in germlings of the oomycete fungus Phytophthora infestans.

    abstract::Actin and tubulins of Phytophthora infestans germlings were detected with monoclonal antibodies on Western blots of crude extracts separated by one-dimensional sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE). The Mr of actin was approximately 43,000, whereas alpha- and beta-tubulin, which migrated...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:

    authors: Temperli E,Roos UP,Hohl HR

    更新日期:1990-10-01 00:00:00

  • Induction of megamitochondria by cuprizone(biscyclohexanone oxaldihydrazone). Evidence for an inhibition of the mitochondrial division process.

    abstract::1. Feeding weanling mice a diet containing 0.5% (w/w) cuprizone (biscyclohexanone oxaldihydrazone) induced megamitochondria of a different type of that previously described (Suzuki, K., Science 163, 81-82 (1969). 2. As in the normal controls, a single population of mitochondria with a narrow size distribution, was det...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:

    authors: Flatmark T,Kryvi H,Tangerås A

    更新日期:1980-12-01 00:00:00

  • Cell cycle-dependent assembly and disassembly of cytoplasmic microtubules in the plasmodium of the myxomycete Physarum polycephalum.

    abstract::The giant syncytium of Physarum plasmodia possesses a complex cytoplasmic microtubule network except during the occurrence of the intranuclear mitosis. In early prophase stages, intranuclear spindles assemble concomitantly as the cytoplasmic microtubule network disassembles. No cytoplasmic microtubules are present in ...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:

    authors: Salles-Passador I,Moisand A,Wright M

    更新日期:1992-06-01 00:00:00

  • Evidence for a homolog of the yeast cell cycle regulatory gene product of cdc2+ in Physarum polycephalum.

    abstract::Evidence for the presence of a Cdc2-like protein in Physarum polycephalum has been obtained using a peptide antibody directed against a highly conserved amino acid sequence near the N-terminal end of Cdc2, Cdc28 and Cdc2HS. The antibody detected a 34 kDa cytoplasmic protein, similar in apparent size to Cdc2 in yeast a...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:

    authors: Shipley GL,Sauer HW

    更新日期:1989-02-01 00:00:00

  • Visualization of actin in situ by rhodamine-conjugated phalloin in the fungus Uromyces phaseoli.

    abstract::Rhodamine-conjugated phalloin, a derivative of phalloidin which binds to F-actin, was associated with three types of structures in uredospore germlings of the bean rust fungus, Uromyces phaseoli. The structures were filaments, peripheral plaques, and intranuclear inclusions. The filaments, located throughout the germ ...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:

    authors: Hoch HC,Staples RC

    更新日期:1983-11-01 00:00:00

  • Association of the nuclear matrix component NuMA with the Cajal body and nuclear speckle compartments during transitions in transcriptional activity in lens cell differentiation.

    abstract::The transcriptional status of cells can be deduced from the staining pattern of various nuclear markers such as the Cajal body, nucleolus and nuclear speckles. In this study we have used these markers to correlate transcriptional status with cell differentiation in the lens. As a closed system with no cell loss and wi...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:10.1078/0171-9335-00275

    authors: Gribbon C,Dahm R,Prescott AR,Quinlan RA

    更新日期:2002-10-01 00:00:00

  • Monoclonal antibody ID5: epitope characterization and minimal requirements for the recognition of polyglutamylated alpha- and beta-tubulin.

    abstract::A monoclonal antibody (ID5) raised against the synthetic tetradecapeptide corresponding to the C-terminal region of detyrosinated alpha-tubulin showed an unexpected cross-reactivity with beta-tubulin from pig brain tissue. The specificity and the minimal epitope requirements of ID5 were characterized by competitive en...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:10.1016/s0171-9335(99)80003-x

    authors: Rüdiger AH,Rüdiger M,Wehland J,Weber K

    更新日期:1999-01-01 00:00:00

  • The fate of multilamellar bodies produced and secreted by Dictyostelium discoideum amoebae.

    abstract::The amoeba Dictyostelium discoideum produces and secretes multilamellar bodies (MLBs) mainly composed of amoebal membranes upon digestion of bacteria. After their secretion, the fate of these MLBs remains unknown. The aim of this study was to determine if protozoa can internalize and digest secreted D. discoideum MLBs...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:10.1016/j.ejcb.2017.10.002

    authors: Denoncourt AM,Durocher AF,Paquet VE,Charette SJ

    更新日期:2017-12-01 00:00:00

  • Actin III and myofilaments in different muscles of wildtype and the mutant raised of Drosophila melanogaster.

    abstract::The mutation raised (rsd, 3-95.4) of Drosophila melanogaster causes flightlessness as a consequence of abnormalities in the fibrillar flight muscles (FFMs). In this muscle type actin III is neither synthesized nor accumulated while adult tubular muscles of rsd flies are indistinguishable from wildtype. This paper demo...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:

    authors: Lang AB,Reinhardt CA,Eppenberger HM,Wyss C

    更新日期:1985-01-01 00:00:00

  • Structure, function and contribution of polysaccharide intercellular adhesin (PIA) to Staphylococcus epidermidis biofilm formation and pathogenesis of biomaterial-associated infections.

    abstract::Staphylococcus epidermidis is of major importance in infections associated with indwelling medical devices. The tight pathogenic association is essentially linked to the species ability to form adherent biofilms on artificial surfaces. Aiming at identifying novel targets for vaccination or therapy much effort has been...

    journal_title:European journal of cell biology

    pub_type: 杂志文章,评审

    doi:10.1016/j.ejcb.2009.10.005

    authors: Rohde H,Frankenberger S,Zähringer U,Mack D

    更新日期:2010-01-01 00:00:00

  • Expression of retinoic acid receptor and retinoid X receptor subtypes in rat liver cells: implications for retinoid signalling in parenchymal, endothelial, Kupffer and stellate cells.

    abstract::In the present study, a systematic examination of the relative expression pattern of the nuclear retinoid receptors (RAR and RXR) in various liver cells was performed. Our data demonstrate that RXRalpha is the dominant receptor in all liver cells, and that RARbeta is also expressed at a high level in most cells. More ...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:10.1016/S0171-9335(98)80078-2

    authors: Ulven SM,Natarajan V,Holven KB,Løvdal T,Berg T,Blomhoff R

    更新日期:1998-10-01 00:00:00

  • Monensin-induced swelling of Golgi apparatus cisternae mediated by a proton gradient.

    abstract::Monensin, a monovalent ionophore, caused swelling of mature cisternae of plant Golgi apparatus. The appearance of swollen cisternae was time-dependent and linear over a period of 1 h with an estimated maximum rate of production of one swollen cisterna every 3 to 4 min. Implicit in these observations was a need for the...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:

    authors: Boss WF,Morré DJ,Mollenhauer HH

    更新日期:1984-05-01 00:00:00

  • Colocalization of stomatin (band 7.2b) and actin microfilaments in UAC epithelial cells.

    abstract::Cytolocalization of stomatin, an integral membrane protein also called erythrocyte band 7.2b, was investigated in a human epithelial cell line in which the expression of this protein is up-regulated after treatment with interleukin-6 and dexamethasone. A monoclonal antibody against stomatin was used to perform immunof...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:

    authors: Snyers L,Thinès-Sempoux D,Prohaska R

    更新日期:1997-07-01 00:00:00

  • Isoproterenol-induced redistribution of endosomes in cardiac myocytes.

    abstract::During myocardial infarction, it is well known that the cytoplasm of cardiac myocytes becomes more acidic due to lactate accumulation. The resulting necrosis is believed to result, at least in part, from the leakage of lysosomal enzymes into the cytoplasm. In addition, it has previously been shown that cytoplasm acidi...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:

    authors: Marjomäki V,Ritamäki V,Gruenberg J

    更新日期:1994-10-01 00:00:00

  • Cellular graviperception in the basidiomycete Flammulina velutipes--can the nuclei serve as fungal statoliths?

    abstract::In search for the cellular mechanisms of graviperception in basidiomycete fruit bodies, nuclear and vacuole motility was investigated in the fungus, Flammulina velutipes. In this organism, hyphal nuclei are closely linked with the actin cytoskeleton, which is involved in gravity perception. Active motion of the nuclei...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:

    authors: Monzer J

    更新日期:1996-10-01 00:00:00

  • Cytoskeletal disruption during human cytomegalovirus infection of human lung fibroblasts.

    abstract::Human cytomegalovirus (HCMV) infection causes a rapid, progressive disruption of the host cell cytoskeleton that correlates with actin depolymerization. Whole-mount (3D) electron microscopy was used to analyze the cytoskeleton of uninfected and HCMV-infected human lung fibroblast cells. Within 2 min of HCMV infection,...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:

    authors: Jones NL,Lewis JC,Kilpatrick BA

    更新日期:1986-08-01 00:00:00

  • Assembly and mechanosensory function of focal adhesions: experiments and models.

    abstract::Initial integrin-mediated cell-matrix adhesions (focal complexes) appear underneath the lamellipodia, in the regions of the "fast" centripetal flow driven by actin polymerization. Once formed, these adhesions convert the flow behind them into a "slow", myosin II-driven mode. Some focal complexes then turn into elongat...

    journal_title:European journal of cell biology

    pub_type: 杂志文章,评审

    doi:10.1016/j.ejcb.2005.11.001

    authors: Bershadsky AD,Ballestrem C,Carramusa L,Zilberman Y,Gilquin B,Khochbin S,Alexandrova AY,Verkhovsky AB,Shemesh T,Kozlov MM

    更新日期:2006-04-01 00:00:00

  • Expression of D-amino acid oxidase in Rhodotorula gracilis under induction conditions: a biochemical and cytochemical study.

    abstract::D-amino acid oxidase is expressed to a high level in the yeast Rhodotorula gracilis (0.3% of total cell protein) through induction by D-alanine in a defined growth medium. Monospecific polyclonal antibodies against pure enzyme were obtained. Western blot analysis showed that the enzyme is synthesized as the mature pol...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:

    authors: Perotti ME,Pollegioni L,Pilone MS

    更新日期:1991-06-01 00:00:00

  • Sorting out the multiple roles of Fas ligand.

    abstract::Fas ligand can both be used by the immune system to initiate cell death, and be used by non-lymphoid cells to evade death. Recent work has shown that Fas ligand is differentially sorted in different cell types. Here we present the viewpoint that the differential sorting plays an important part in determining the role ...

    journal_title:European journal of cell biology

    pub_type: 杂志文章,评审

    doi:10.1078/0171-9335-00077

    authors: Bossi G,Stinchcombe JC,Page LJ,Griffiths GM

    更新日期:2000-08-01 00:00:00

  • Integrin-linked kinase and its partners: a modular platform regulating cell-matrix adhesion dynamics and cytoskeletal organization.

    abstract::Integrin-linked kinase (ILK) represents a key component of integrin signaling complexes that functions in concert with multiple binding partners to transmit cues from the extracellular matrix environment to the actin cytoskeleton. Both gain- and loss-of-function approaches to study ILK have confirmed the essential rol...

    journal_title:European journal of cell biology

    pub_type: 杂志文章,评审

    doi:10.1016/j.ejcb.2005.09.002

    authors: Boulter E,Van Obberghen-Schilling E

    更新日期:2006-04-01 00:00:00

  • Calcium uptake by sarcoplasmic reticulum of rat muscle: inhibition by DDT.

    abstract::Sarcoplasmic reticulum fragments capable of accumulating calcium were isolated from rat skeletal muscle by differential and sucrose gradient centrifugation. The ability of these fragments to accumulate calcium was impaired by adding 2,2-bis-(p-chlorophenyl)-1,1,1-trichloroethane (DDT) to the assay medium at concentrat...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:

    authors: Elder JH,Morré DJ,Yunghans WN

    更新日期:1979-08-01 00:00:00

  • MiR-124 suppresses the chemotactic migration of rat mesenchymal stem cells toward HGF by downregulating Wnt/β-catenin signaling.

    abstract::Mesenchymal stem cells (MSCs) exhibit the potential to repair a wide variety of injured adult tissues. The migration capability of MSCs is an important determinant of the efficiency of MSC transplant therapy. MicroRNAs (miRNAs) are increasingly implicated in regulating the migration of MSCs. Herein, we show that the e...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:10.1016/j.ejcb.2016.06.005

    authors: Yue Q,Zhang Y,Li X,He L,Hu Y,Wang X,Xu X,Shen Y,Zhang H

    更新日期:2016-09-01 00:00:00

  • Receptor-mediated pinocytosis of IgG and immune complex in rat peritoneal macrophages: an electron microscopic study.

    abstract::The uptake mechanism of homologous IgG and immune complex, and the participation of coated vesicles in this process were studied in rat peritoneal macrophages. Peroxidase-antiperoxidase (PAP) immune complex produced in rat, and purified rat IgG adsorbed to gold particles (IgG-Au) were used as ligands. Freshly collecte...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:

    authors: Kiss AL,Röhlich P

    更新日期:1984-05-01 00:00:00

  • Preferential release of newly synthesized, exportable neuropeptides by insect neuroendocrine cells and the effect of ageing of secretory granules.

    abstract::The release of newly synthesized neuropeptides was studied in an in vitro system using the adipokinetic hormone (AKH)-producing cells of an insect (Locusta migratoria) as a model system. Tritiated phenylalanine incorporated into three hormonal neuropeptides, AKH I, II and III, was used to distinguish newly synthesized...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:

    authors: Sharp-Baker HE,Oudejans RC,Kooiman FP,Diederen JH,Peute J,Van der Horst DJ

    更新日期:1996-09-01 00:00:00

  • Distribution of sulfated glycosaminoglycans in the glomerular basement membrane and mesangial matrix.

    abstract::The relative distribution of heparan sulfate-glycosaminoglycan (HS-GAG) and chondroitin sulfate-glycosaminoglycans (CS-GAG) of the mesangial matrix (MM) and the glomerular basement membrane (GBM), which represent the two glomerular extracellular matrices, was determined by a combination of enzymatic treatments and aut...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:

    authors: Kanwar YS,Jakubowski ML,Rosenzweig LJ

    更新日期:1983-09-01 00:00:00

  • Isolation of zymogen granules from rat pancreas and characterization of their membrane proteins.

    abstract::A zymogen granule fraction has been isolated from rat pancreas, and its purity has been assessed by biochemical and morphological criteria. Specific activities of two marker enzymes, amylase and chymotrypsin, are increased by 4.6 and 5.4-fold, respectively, as compared to the homogenate. The purified fraction is devoi...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:

    authors: Pâquet MR,St-Jean P,Roberge M,Beaudoin AR

    更新日期:1982-08-01 00:00:00

  • Inhibitory Ca(2+)-regulation of myosin light chain kinase in the lower eukaryote, Physarum polycephalum: role of a Ca(2+)-dependent inhibitory factor.

    abstract::ATP-dependent interactions between myosin and actin in the lower eukaryote, Physarum polycephalum, are inhibited by micromolar levels of Ca2+. This inhibition is mediated by the binding of Ca2+ to myosin, the phosphorylation of which is required if Ca2+ is to inhibit the activities of myosin (Kohama, K., Trends Pharma...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:

    authors: Okagaki T,Ishikawa R,Kohama K

    更新日期:1991-10-01 00:00:00

  • Regulation of the maize (Zea mays L.) embryo proteome by RTCS which controls seminal root initiation.

    abstract::Seminal roots are initiated at the scutellar node during maize (Zea mays L.) embryo development. The maize mutant rtcs (rootless concerning crown and seminal roots) does not initiate seminal roots while its wild-type siblings form on average 2.9 seminal roots per seedling. In this study, proteome profiles of 25-day-ol...

    journal_title:European journal of cell biology

    pub_type: 杂志文章

    doi:10.1016/j.ejcb.2009.11.014

    authors: Muthreich N,Schützenmeister A,Schütz W,Madlung J,Krug K,Nordheim A,Piepho HP,Hochholdinger F

    更新日期:2010-02-01 00:00:00