Restoring full biological activity to the isolated ectodomain of an integral membrane protein.

Abstract:

:Integral membrane proteins, which include many cellular effector proteins and drug targets, can be difficult to produce, purify, and manipulate. Although the isolated ectodomains of many membrane proteins can be expressed as water soluble proteins, biological activity is frequently lost when these proteins are released from the membrane surface. An example is tissue factor, the integral membrane protein that triggers the blood clotting cascade and for which membrane anchoring is essential. Its isolated ectodomain (soluble tissue factor) can be expressed with high yield in bacteria but is orders of magnitude less active than the intact, membrane-anchored protein. We now report full restoration of biological activity to the isolated tissue factor ectodomain via the engineering of a hexahistidine tag onto its C-terminus and its use in combination with membrane bilayers containing nickel-chelating lipids. When soluble tissue factor was tethered to the membrane surface via such metal-chelating lipids, it bound factor VIIa with the same high affinity as wild-type tissue factor, and the resulting factor VIIa-tissue factor complexes supported factor X activation and factor VII autoactivation with essentially wild-type enzyme kinetic constants. Furthermore, when such bilayers were immobilized onto solid supports, they efficiently captured histidine-tagged soluble tissue factor directly from crude culture supernatants, with full biological activity, obviating the need for purification or laborious membrane reconstitution procedures. This strategy is rapid, efficient, scalable, and automatable and should be applicable to other integral membrane proteins, especially those with a single transmembrane domain. Applications include high-throughput screening of mutants or drugs, flow reactors, clinical assays, and point-of-care instrumentation.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Waters EK,Morrissey JH

doi

10.1021/bi052600m

subject

Has Abstract

pub_date

2006-03-21 00:00:00

pages

3769-74

issue

11

eissn

0006-2960

issn

1520-4995

journal_volume

45

pub_type

杂志文章
  • Gonadotropin releasing hormone activates the lipoxygenase pathway in cultured pituitary cells: role in gonadotropin secretion and evidence for a novel autocrine/paracrine loop.

    abstract::The formation and role of arachidonic acid (AA) and its metabolites during gonadotropin releasing hormone- (GnRH-) induced gonadotropin secretion were investigated in primary cultures of rat pituitary cells. Prelabeled cells ([3H]AA) responded to GnRH challenge with increased formation (about 2-fold) of the leukotrien...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00139a004

    authors: Dan-Cohen H,Sofer Y,Schwartzman ML,Natarajan RD,Nadler JL,Naor Z

    更新日期:1992-06-23 00:00:00

  • Analysis of the backbone dynamics of interleukin-1 beta using two-dimensional inverse detected heteronuclear 15N-1H NMR spectroscopy.

    abstract::The backbone dynamics of uniformly 15N-labeled interleukin-1 beta are investigated by using two-dimensional inverse detected heteronuclear 15N-1H NMR spectroscopy. 15N T1, T2, and NOE data at a spectrometer frequency of 600 MHz are obtained for 90% of the backbone amide groups. The data provide evidence for motions on...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00484a006

    authors: Clore GM,Driscoll PC,Wingfield PT,Gronenborn AM

    更新日期:1990-08-14 00:00:00

  • Yeast pol eta holds a cis-syn thymine dimer loosely in the active site during elongation opposite the 3'-T of the dimer, but tightly opposite the 5'-T.

    abstract::Polymerase eta is a member of the Y family of DNA polymerases which is able to bypass thymine dimers efficiently and in a relatively error-free manner. To elucidate the mechanism of dimer bypass, the efficiency of dAMP and pyrene nucleotide insertion opposite the thymine dimer and its N3-methyl derivatives was determi...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0345687

    authors: Sun L,Zhang K,Zhou L,Hohler P,Kool ET,Yuan F,Wang Z,Taylor JS

    更新日期:2003-08-12 00:00:00

  • Potassium flux through gramicidin ion channels is augmented in vesicles comprised of plasmenylcholine: correlations between gramicidin conformation and function in chemically distinct host bilayer matrices.

    abstract::The functional role of distinct phospholipid subclasses and molecular species in modulating gramicidin-mediated K+ flux was characterized through quantification of changes in the fluorescence intensity of ion specific fluorescent probes encapsulated inside vesicles comprised of individual molecular species of plasmeny...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00022a008

    authors: Chen X,Gross RW

    更新日期:1995-06-06 00:00:00

  • Magnesium fluoride-dependent binding of small G proteins to their GTPase-activating proteins.

    abstract::GTPase-activating proteins (GAPs) enhance the intrinsic GTPase activity of small G proteins, such as Ras and Rho, by contributing a catalytic arginine to the active site. An intramolecular arginine plays a similar role in heterotrimeric G proteins. Aluminum fluoride activates the GDP form of heterotrimeric G proteins,...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi991358e

    authors: Graham DL,Eccleston JF,Chung CW,Lowe PN

    更新日期:1999-11-09 00:00:00

  • Stereospecific Radical-Mediated B12-Dependent Methyl Transfer by the Fosfomycin Biosynthesis Enzyme Fom3.

    abstract::Fom3, the antepenultimate enzyme in the fosfomycin biosynthetic pathway in Streptomyces spp., is a class B cobalamin-dependent radical SAM methyltransferase that catalyzes methylation of (5'-cytidylyl)-2-hydroxyethylphosphonate (2-HEP-CMP) to form (5'-cytidylyl)-2-hydroxypropylphosphonate (2-HPP-CMP). Previously, the ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.8b00616

    authors: McLaughlin MI,van der Donk WA

    更新日期:2018-08-21 00:00:00

  • Light-activated calcium release from sonicated bovine retinal rod outer segment disks.

    abstract::Calcium trapped within sonicated and resealed bovine rod outer segment disks is released upon light exposure with a stoichiometry of 0.75 +/- 0.05 calcium for each rhodopsin bleached. The amount of calcium liberated is proportional to the amount of bleaching in the range of 20 to 100% bleaching and is relatively insen...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00626a025

    authors: Smith HG Jr,Fager RS,Litman RJ

    更新日期:1977-04-05 00:00:00

  • Major groove (R)-alpha-(N6-adenyl)styrene oxide adducts in an oligodeoxynucleotide containing the human N-ras codon 61 sequence: conformations of the R(61,2) and R(61,3) sequence isomers from 1H NMR.

    abstract::Conformations of (R)-alpha-(N6-adenyl)styrene oxide adducts at positions X6 in d(CGGACXAGAAG).d(CTTCTTGTCCG) and X7 in d(CGGACAXGAAG).d(CTTCTTGTCCG), incorporating codons 60, 61 (underlined), and 62 of the human n-ras protooncogene, were refined from 1H NMR data. These were the R(61,2) and R(61,3) adducts. Chemical sh...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00043a008

    authors: Feng B,Zhou L,Passarelli M,Harris CM,Harris TM,Stone MP

    更新日期:1995-10-31 00:00:00

  • Free energy rhythms in Saccharomyces cerevisiae: a dynamic perspective with implications for ribosomal biogenesis.

    abstract::To describe the time course of cellular systems, we integrate ideas from thermodynamics and information theory to discuss the work needed to change the state of the cell. The biological example analyzed is experimental microarray transcription level oscillations of yeast in the different phases as characterized by oxy...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi3016982

    authors: Gross A,Li CM,Remacle F,Levine RD

    更新日期:2013-03-05 00:00:00

  • Unstructured RNA is a substrate for tRNase Z.

    abstract::tRNase Z, which exists in almost all cells, is believed to be working primarily for tRNA 3' maturation. In Escherichia coli, however, the tRNase Z gene appears to be dispensable under normal growth conditions, and its physiological role is not clear. Here, to investigate a possibility that E. coli tRNase Z cleaves RNA...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi051972s

    authors: Shibata HS,Minagawa A,Takaku H,Takagi M,Nashimoto M

    更新日期:2006-05-02 00:00:00

  • Importance of two buried salt bridges in the stability and folding pathway of barnase.

    abstract::The importance of two buried salt bridges in barnase in the stability of its folded state, the major transition rate for unfolding, and a folding intermediate has been analyzed by protein engineering, kinetic, and thermodynamic studies. The aspartate residues in the bridges Arg69-Asp93 and Arg83-Asp75 were replaced by...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi952930e

    authors: Tissot AC,Vuilleumier S,Fersht AR

    更新日期:1996-05-28 00:00:00

  • Cloning of synthetic deoxyribonucleic acid that codes for embryonic cardiac myosin light-chain polypeptide.

    abstract::Double-stranded complementary deoxyribonucleic acid (cDNA) transcribed in vitro from a partially pure myosin light-chain messenger ribonucleic acid (mRNA) of the chick embryonic heart was cloned in Escherichia coli strain chi 1776 by using the HindIII cleavage site in the plasmid pBR322. The insertion of essentially f...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00592a019

    authors: Arnold HH,Siddiqui MA

    更新日期:1979-12-11 00:00:00

  • The C-terminal domain of the utrophin tandem calponin-homology domain appears to be thermodynamically and kinetically more stable than the full-length protein.

    abstract::Domains are in general less stable than the corresponding full-length proteins. Human utrophin tandem calponin-homology (CH) domain seems to be an exception. Reversible, equilibrium denaturant melts indicate that the isolated C-terminal domain (CH2) is thermodynamically more stable than the tandem CH domain. Thermal m...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi500120e

    authors: Bandi S,Singh SM,Mallela KM

    更新日期:2014-04-15 00:00:00

  • Identification of factor XIIIA-reactive glutamine acceptor and lysine donor sites within fibronectin-binding protein (FnbA) from Staphylococcus aureus.

    abstract::Staphylococcal fibronectin-binding protein (FnbA) is a surface-associated receptor responsible for the reversible binding of bacteria to human fibronectin and fibrin(ogen). Recently we have shown that FnbA serves as a substrate for coagulation factor XIIIa and undergoes covalent cross-linking to its ligands, resulting...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi049278k

    authors: Anderson ET,Fletcher L,Severin A,Murphy E,Baker SM,Matsuka YV

    更新日期:2004-09-21 00:00:00

  • Photolabile protecting groups for an acetylcholine receptor ligand. Synthesis and photochemistry of a new class of o-nitrobenzyl derivatives and their effects on receptor function.

    abstract::Two compounds have been synthesized that feature a photosensitive o-nitrobenzyl moiety attached directly to the carbamate nitrogen of carbamoylcholine. The well-characterized acetylcholine analogue, carbamoylcholine, was released from these derivatives in response to laser light pulses at wavelengths between 300 and 3...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00355a052

    authors: Walker JW,McCray JA,Hess GP

    更新日期:1986-04-08 00:00:00

  • Novel benzimidazole inhibitors bind to a unique site in the kinesin spindle protein motor domain.

    abstract::Affinity selection-mass spectrometry (AS-MS) screening of kinesin spindle protein (KSP) followed by enzyme inhibition studies and temperature-dependent circular dichroism (TdCD) characterization was utilized to identify a series of benzimidazole compounds. This series also binds in the presence of Ispinesib, a known a...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi1005283

    authors: Sheth PR,Shipps GW Jr,Seghezzi W,Smith CK,Chuang CC,Sanden D,Basso AD,Vilenchik L,Gray K,Annis DA,Nickbarg E,Ma Y,Lahue B,Herbst R,Le HV

    更新日期:2010-09-28 00:00:00

  • Small Molecule Rescue and Glycosidic Conformational Analysis of the Twister Ribozyme.

    abstract::The number of self-cleaving ribozymes has increased sharply in recent years, giving rise to elaborations of the four known ribozyme catalytic strategies, α, β, γ, and δ. One such extension is utilized by the twister ribozyme, which is hypothesized to conduct δ, or general acid catalysis, via N3 of the syn adenine +1 n...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.9b00742

    authors: Messina KJ,Kierzek R,Tracey MA,Bevilacqua PC

    更新日期:2019-12-03 00:00:00

  • A protein arginine N-methyltransferase 1 (PRMT1) and 2 heteromeric interaction increases PRMT1 enzymatic activity.

    abstract::Protein arginine N-methyltransferases (PRMTs) act in signaling pathways and gene expression by methylating arginine residues within target proteins. PRMT1 is responsible for most cellular arginine methylation activity and can work independently or in collaboration with other PRMTs. In this study, we demonstrate a dire...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi200644c

    authors: Pak ML,Lakowski TM,Thomas D,Vhuiyan MI,Hüsecken K,Frankel A

    更新日期:2011-09-27 00:00:00

  • ATP synthase of chloroplasts: selective action of agents binding to F1 on partial reactions of proton transfer in F0.

    abstract::We studied the basic steps of proton transfer through ATP synthase of chloroplasts, CF0CF1, under conditions of proton slip, a conducting stage in the absence of added nucleotides. On the background of a steady transmembrane pH difference, voltage steps were induced by flashing light. Proton intake, transfer, and rele...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00027a008

    authors: Groth G,Junge W

    更新日期:1995-07-11 00:00:00

  • hnRNP A2 selectively binds the cytoplasmic transport sequence of myelin basic protein mRNA.

    abstract::Segregation of mRNAs in the cytoplasm of polar cells has been demonstrated for proteins involved in Xenopus and Drosophila oogenesis, and for some proteins in somatic cells. It is assumed that vectorial transport of the messages is generally responsible for this localization. The mRNA encoding the basic protein of cen...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9800247

    authors: Hoek KS,Kidd GJ,Carson JH,Smith R

    更新日期:1998-05-12 00:00:00

  • Lipid binding by fragments of apolipoprotein C-III-1 obtained by thrombin cleavage.

    abstract::We have used thrombin to cleave apolipoprotein C-III-1 into two fragments constituting residues 1-40 (apoLP-C-III-A) and 41-79 (apoLP-C-III-B). The lipid binding properties of these fragments with dimyristoyl- and 1-palmitoyl-2-oleoylphosphatidylcholines have been determined using circular dichroic and intrinsic trypt...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00644a004

    authors: Sparrow JT,Pownall HJ,Hsu FJ,Blumenthal LD,Culwell AR,Gotto AM

    更新日期:1977-12-13 00:00:00

  • Structural and functional analysis of NADPH-cytochrome P-450 reductase from human liver: complete sequence of human enzyme and NADPH-binding sites.

    abstract::The complete amino acid sequence of human liver NADPH-cytochrome P-450 reductase has been determined by microsequence analysis and mass spectrometry. The total sequence consists of 676 amino acids initiated by an amino-terminal acetyl group. There is no evidence for posttranslational modifications, including Asn-linke...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00447a054

    authors: Haniu M,McManus ME,Birkett DJ,Lee TD,Shively JE

    更新日期:1989-10-17 00:00:00

  • Triacylglycerol and phospholipid hydrolysis in human plasma lipoproteins: role of lipoprotein and hepatic lipase.

    abstract::To explore the interactions of triacylglycerol and phospholipid hydrolysis in lipoprotein conversions and remodeling, we compared the activities of lipoprotein and hepatic lipases on human VLDL, IDL, LDL, and HDL2. Triacylglycerol and phospholipid hydrolysis by each enzyme were measured concomitantly in each lipoprote...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00151a023

    authors: Deckelbaum RJ,Ramakrishnan R,Eisenberg S,Olivecrona T,Bengtsson-Olivecrona G

    更新日期:1992-09-15 00:00:00

  • Positions of sea urchin (Strongylocentrotus purpuratus) histone genes relative to restriction endonuclease sites on the chimeric plasmids pSp2 and pSp17.

    abstract::The positions of the several sea urchin histone genes on the eukaryotic fragments of the chimeric plasmids pSp2 and pSp17 have been mapped relative to the Eco RI and Hind III restriction endonuclease sites on the plasmids. Two principal mapping methods using the electron microscope have been used: (a) the R-loop proce...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00626a040

    authors: Holmes DS,Cohn RH,Kedes LH,Davidson N

    更新日期:1977-04-05 00:00:00

  • Characterization of myotoxin a from the venom of prairie rattlesnake (Crotalus viridis viridis).

    abstract::A previously unknown polypeptide myotoxin, designated myotoxin a, was isolated for the first time from prairie rattlesnake (Crotalus viridis viridis) venom. Electrophoretic homogeneity of myotoxin a was shown in beta-alanine disc gel polyacrylamide gel electrophoresis and in isoelectric focusing gel electrophoresis. M...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00630a035

    authors: Cameron DL,Tu AT

    更新日期:1977-05-31 00:00:00

  • Studies of 1-deoxy-D-fructose, 1-deoxy-D-glucitol, and 1-deoxy-D-minnitol as antimetabolites.

    abstract::1-Deoxy-D-fructose was synthesized in 27% yield from D-glucosamine in a three-step procedure involving Raney nickel desulfurization and oxidative deamination with 3,5-di-tert-butyl- 1,2-benzoquinone applied to appropriate intermediates. 1-Deoxyfructose and its reduction products, 1-deoxyglucitol and 1-deoxymannitol, w...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00665a027

    authors: Dills WL Jr,Meyer WL

    更新日期:1976-10-05 00:00:00

  • The A-state of barnase.

    abstract::The acid-induced denaturation of barnase and its mutants has been analyzed to search for partly-folded intermediates. Differential scanning calorimetry of barnase deviates from two-state behavior below pH 4.0 at low ionic strength, with the maximum discrepancy at pH 2.7. Addition of 200 mM KCl apparently restores the ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00203a015

    authors: Sanz JM,Johnson CM,Fersht AR

    更新日期:1994-09-20 00:00:00

  • Protonmotive activity of cytochrome c oxidase: control of oxidoreduction of the heme centers by the protonmotive force in the reconstituted beef heart enzyme.

    abstract::This paper contributes to the characterization of partial steps of electron and proton transfer in mitochondrial cytochrome c oxidase with respect to their membrane arrangement and involvement in energy-linked protonmotive activity. It is shown that delta psi controls electron flow from cytochrome c to heme a is consi...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00464a008

    authors: Capitanio N,De Nitto E,Villani G,Capitanio G,Papa S

    更新日期:1990-03-27 00:00:00

  • Folding/unfolding kinetics of mutant forms of iso-1-cytochrome c with replacement of proline-71.

    abstract::Proline-71, an evolutionally conserved residue that separates two short alpha-helical regions, is replaced by valine, threonine, or isoleucine in at least partially functional forms of iso-1-cytochrome c from Saccharomyces cerevisiae [Ernst, J. F., Hampsey, D. M., Stewart, J. W., Rackovsky, S., Goldstein, D., & Sherma...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00370a033

    authors: Ramdas L,Nall BT

    更新日期:1986-11-04 00:00:00

  • Purification and biochemical characterization of tubulin from the budding yeast Saccharomyces cerevisiae.

    abstract::We describe a method for isolating milligram quantities of assembly-competent tubulin from the budding yeast Saccharomyces cerevisiae. The tubulin is > 95% purified and free of contaminating enzyme activities. As a result, it has been possible to determine the yeast tubulin equilibrium-binding constant for Mg-GTP and ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00085a013

    authors: Davis A,Sage CR,Wilson L,Farrell KW

    更新日期:1993-08-31 00:00:00