Molecular interactions of nonpeptide agonists and antagonists with the melanocortin-4 receptor.

Abstract:

:The melanocortin-4 (MC4) receptor is a potential therapeutic target for obesity and cachexia, for which nonpeptide agonists and antagonists are being developed, respectively. The aim of this study was to identify molecular interactions between the MC4 receptor and nonpeptide ligands, and to compare the mechanism of binding between agonist and antagonist ligands. Nonpeptide ligand interaction was affected by mutations that reduce peptide ligand binding (D122A, D126A, S190A, M200A, F261A, and F284A), confirming overlapping binding determinants for peptide and nonpeptide ligands. The common halogenated phenyl group of nonpeptide ligands was a determinant of F261A and F284A mutations' affinity-reducing effect, implying this group interacts with the aromatic side chains of these residues. All affected compounds contain this group, the mutations reduced binding of 2,4-dichloro-substituted compounds more than 4-chloro-substituted-compounds, and F284A mutation eliminated the affinity-enhancing effect of 2-chloro-substitution. F261A and F284A mutations reduced the affinity of antagonists more than agonists, suggesting that the stronger ligand interaction with these residues, the lower the ligand efficacy. Supporting this hypothesis, F261A mutation increased the efficacy of nonpeptide antagonist and partial agonist ligands. D122A and D126A mutations reduced nonpeptide ligand interaction. Removing the ligands' derivatized amide group eliminated the effect of the mutations. Interaction of agonists, which bear a common amine within this group, was strongly reduced by D126A mutation (550-3300-fold), suggesting an electrostatic interaction between the amine and the acidic group of D126. These postulated interactions with aromatic and acidic regions of the MC4 receptor are consistent with a molecular model of the receptor. Furthermore, the strength of interaction with the aromatic pocket, and potentially the acidic pocket, controls the signaling efficacy of the ligand.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Fleck BA,Chen C,Yang W,Huntley R,Markison S,Nickolls SA,Foster AC,Hoare SR

doi

10.1021/bi051316s

subject

Has Abstract

pub_date

2005-11-08 00:00:00

pages

14494-508

issue

44

eissn

0006-2960

issn

1520-4995

journal_volume

44

pub_type

杂志文章
  • Inhibition of iodine-125-labeled human follitropin binding to testicular receptor by epidermal growth factor and synthetic peptides.

    abstract::Two tetrapeptide sequence homologies between mouse epidermal growth factor precursor (mEGFP) and human follitropin (FSH) were revealed by a computer program that identifies identical residues among polypeptide sequences. The two tetrapeptides, Lys-Thr-Cys-Thr (KTCT) and Thr-Arg-Asp-Leu (TRDL), are present in the hormo...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00357a053

    authors: Sluss PM,Krystek SR Jr,Andersen TT,Melson BE,Huston JS,Ridge R,Reichert LE Jr

    更新日期:1986-05-06 00:00:00

  • Inactivation of Met471Cys tyramine β-monooxygenase results from site-specific cysteic acid formation.

    abstract::Tyramine β-monooxygenase (TβM), the insect homologue of dopamine β-monooxygenase, is a neuroregulatory enzyme that catalyzes the β-hydroxylation of tyramine to yield octopamine. Mutation of the methionine (Met) ligand to Cu(M) of TβM, Met471Cys, yielded a form of TβM that is catalytically active but susceptible to ina...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi300456f

    authors: Osborne RL,Zhu H,Iavarone AT,Hess CR,Klinman JP

    更新日期:2012-09-25 00:00:00

  • The novel bovine serpin endopin 2C demonstrates selective inhibition of the cysteine protease cathepsin L compared to the serine protease elastase, in cross-class inhibition.

    abstract::Molecular cloning revealed the unique serpin endopin 2C that demonstrates selective inhibition of cathepsin L compared to papain or elastase. Endopin 2C, thus, functions as a serpin with the property of cross-class inhibition. Endopin 2C possesses homology in primary sequence to endopin 2A and other isoforms of endopi...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi050053z

    authors: Hwang SR,Stoka V,Turk V,Hook VY

    更新日期:2005-05-31 00:00:00

  • Ligand stabilization of the beta 2 adrenergic receptor: effect of DTT on receptor conformation monitored by circular dichroism and fluorescence spectroscopy.

    abstract::Treatment of the beta 2 adrenergic receptor with the reducing agent dithiothreitol (DTT) is known to abolish ligand binding to the receptor. Interestingly, the loss of binding can be prevented by preoccupation of the receptor with ligand. It is unclear, however, whether the ligand blocks access of DTT to the receptor,...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi961619+

    authors: Lin S,Gether U,Kobilka BK

    更新日期:1996-11-19 00:00:00

  • Modulation of the actin-activated adenosinetriphosphatase activity of myosin by tropomyosin from vascular and gizzard smooth muscles.

    abstract::Tropomyosins from bovine aorta and pulmonary artery exhibit identical electrophoretic patterns in sodium dodecyl sulfate but differ from tropomyosins of either chicken gizzard or rabbit skeletal muscle. Each of the four tropomyosins binds readily to skeletal muscle F-actin as indicated by their sedimentation with acti...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00299a029

    authors: Yamaguchi M,Ver A,Carlos A,Seidel JC

    更新日期:1984-02-14 00:00:00

  • Direct evidence for multifacial contacts between high molecular weight kininogen and plasma prekallikrein.

    abstract::HK31 (S565-K595) has previously been shown to encompass the binding domain for plasma prekallikrein (PK) within domain 6 of high molecular weight kininogen (HK). The complementary binding domain for HK within PK is mapped to PK56 (F56-G86), in the apple 1 domain, and to PK266 (K266-C295), in the apple 4 domain. Isothe...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi960547j

    authors: Lin Y,Shenoy SS,Harris RB,Colman RW

    更新日期:1996-10-01 00:00:00

  • The vinblastine binding site adopts high- and low-affinity conformations during a transport cycle of P-glycoprotein.

    abstract::Conceptually one may envisage that substrate binding sites on the ABC transporter P-gp cycle between high- and low-affinity conformations in response to signals arising from nucleotide hydrolysis to effect active transport. A radioligand binding assay was used to characterize the interaction of [3H]vinblastine with P-...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi011211z

    authors: Martin C,Higgins CF,Callaghan R

    更新日期:2001-12-25 00:00:00

  • RNA secondary structure: an important cis-element in rat calcitonin/CGRP pre-messenger RNA splicing.

    abstract::The calcitonin/CGRP gene pre-mRNA is alternatively spliced in a tissue-specific manner resulting in the formation of calcitonin mRNA in thyroid C-cells and CGRP mRNA in neurons. Computer analysis of the RNA containing the 3' splice acceptor of the calcitonin-specific exon 4 predicts that this region has the potential ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9808058

    authors: Coleman TP,Roesser JR

    更新日期:1998-11-10 00:00:00

  • Kinetic and Spectroscopic Characterization of the Catalytic Ternary Complex of Tryptophan 2,3-Dioxygenase.

    abstract::The first step of the kynurenine pathway for l-tryptophan (l-Trp) degradation is catalyzed by heme-dependent dioxygenases, tryptophan 2,3-dioxygenase (TDO) and indoleamine 2,3-dioxygenase. In this work, we employed stopped-flow optical absorption spectroscopy to study the kinetic behavior of the Michaelis complex of C...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.0c00179

    authors: Geng J,Weitz AC,Dornevil K,Hendrich MP,Liu A

    更新日期:2020-08-04 00:00:00

  • Reconstitution of bovine procarboxypeptidase A-S6 from the free subunits.

    abstract::The three subunits I, II, and III of bovine procarboxypeptidase A separated by reversible dimethylmaleylation can reassociate to form the reconstituted complexes I + II, I + III, and I + II + III. Since the association II + III is not possible, subunit I appears to play a central role in the formation of the complex. ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00630a028

    authors: Puigserver A,Desnuelle P

    更新日期:1977-05-31 00:00:00

  • Direct identification of the agonist binding site in the human brain cholecystokininB receptor.

    abstract::In investigating the agonist binding site of the human brain cholecystokininB receptor (CCKBR), we employed the direct protein chemical approach using a photoreactive tritiated analogue of sulfated cholecystokinin octapeptide, which contains the p-benzoylbenzoyl moiety at the N-terminus, followed by purification of th...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi990269z

    authors: Anders J,Blüggel M,Meyer HE,Kühne R,ter Laak AM,Kojro E,Fahrenholz F

    更新日期:1999-05-11 00:00:00

  • Determination of the extent of DNA bending by an adenine-thymine tract.

    abstract::We determined the magnitude of the bend induced in DNA by an adenine-thymine tract by measuring the rate of cyclization of DNA oligonucleotides containing phased A tracts. A series of linear multimers with 2-bp single-stranded ends, in which the (A.T)6 tracts are separated by CG2-3C sequences and are positioned 10 and...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00469a027

    authors: Koo HS,Drak J,Rice JA,Crothers DM

    更新日期:1990-05-01 00:00:00

  • IscA, an alternate scaffold for Fe-S cluster biosynthesis.

    abstract::An IscA homologue within the nif regulon of Azotobacter vinelandii, designated (Nif)IscA, was expressed in Escherichia coli and purified to homogeneity. Purified (Nif)IscA was found to be a homodimer of 11-kDa subunits that contained no metal centers or other prosthetic groups in its as-isolated form. Possible roles f...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi015656z

    authors: Krebs C,Agar JN,Smith AD,Frazzon J,Dean DR,Huynh BH,Johnson MK

    更新日期:2001-11-20 00:00:00

  • Solid-State Nuclear Magnetic Resonance Structural Study of the Retinal-Binding Pocket in Sodium Ion Pump Rhodopsin.

    abstract::The recently identified Krokinobacter rhodopsin 2 (KR2) functions as a light-driven sodium ion pump. The structure of the retinal-binding pocket of KR2 offers important insights into the mechanisms of KR2, which has motif of Asn112, Asp116, and Gln123 (NDQ) that is common among sodium ion pump rhodopsins but is unique...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.6b00999

    authors: Shigeta A,Ito S,Inoue K,Okitsu T,Wada A,Kandori H,Kawamura I

    更新日期:2017-01-31 00:00:00

  • Evidence for functional and structural multiplicity of pregnenolone-16 alpha-carbonitrile-inducible cytochrome P-450 isozymes in rat liver microsomes.

    abstract::Administration of pregnenolone-16 alpha-carbonitrile (PCN) to adult female rats caused a 2-fold increase in total liver microsomal cytochrome P-450 along with 5-7-fold increases in four in vitro monooxygenase activities considered diagnostic for the major PCN-inducible cytochrome P-450 isozyme. However, upon administr...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00387a022

    authors: Graves PE,Kaminsky LS,Halpert J

    更新日期:1987-06-30 00:00:00

  • Is Arg418 the catalytic base required for the hydrolysis step of the IMP dehydrogenase reaction?

    abstract::The first committed step of guanine nucleotide biosynthesis is the oxidation of inosine 5'-monophosphate (IMP) to xanthosine 5'-monophosphate (XMP) catalyzed by IMP dehydrogenase. The reaction involves the reduction of NAD(+) with the formation of a covalent enzyme intermediate (E-XMP). Hydrolysis of E-XMP requires th...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi048342v

    authors: Guillén Schlippe YV,Hedstrom L

    更新日期:2005-09-06 00:00:00

  • Thermodynamics of the dimer-decamer transition of reduced human and plant 2-cys peroxiredoxin.

    abstract::Isothermal titration calorimetry (ITC) is a powerful technique for investigating self-association processes of protein complexes and was expected to reveal quantitative data on peroxiredoxin oligomerization by directly measuring the thermodynamic parameters of dimer-dimer interaction. Recombinant classical 2-cysteine ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi8002956

    authors: Barranco-Medina S,Kakorin S,Lázaro JJ,Dietz KJ

    更新日期:2008-07-08 00:00:00

  • Thermotropic behavior of glycosphingolipids in aqueous dispersions.

    abstract::The thermotropic behavior of 20 chemically related glycosphingolipids (GSLs) of high purity, containing neutral and anionic carbohydrate residues in their oligosaccharide chains, was studied by high-sensitivity differential scanning calorimetry. In general, the polar head group of GSLs appears to be one of the major d...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00326a003

    authors: Maggio B,Ariga T,Sturtevant JM,Yu RK

    更新日期:1985-02-26 00:00:00

  • Intrastrand DNA cross-links as tools for studying DNA replication and repair: two-, three-, and four-carbon tethers between the N(2) positions of adjacent guanines.

    abstract::A general protocol for preparation of oligonucleotides containing intrastrand cross-links between the exocyclic amino groups of adjacent deoxyguanosines has been developed. A series of 2, 3, and 4 methylene cross-links was incorporated site-specifically into an 11-mer (5'-GGCAGGTGGTG-3', cross-linked positions are und...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi010450j

    authors: Kowalczyk A,Carmical JR,Zou Y,Van Houten B,Lloyd RS,Harris CM,Harris TM

    更新日期:2002-03-05 00:00:00

  • Expression and sequence analyses of serum amyloid A in the Syrian hamster.

    abstract::Reactive amyloidosis occurs during chronic inflammation and involves deposition of amyloid A (AA) fibrils in many organs. Amyloid A is derived by proteolysis from serum amyloid A component (SAA), a major acute-phase reactant in many species. Since spontaneous amyloidosis occurs commonly in Syrian hamsters, we have stu...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00437a040

    authors: Webb CF,Tucker PW,Dowton SB

    更新日期:1989-05-30 00:00:00

  • Protochlorophyllide oxidoreductase: "dark" reactions of a light-driven enzyme.

    abstract::The light-driven enzyme NADPH:protochlorophyllide oxidoreductase (POR) catalyzes the reduction of protochlorophyllide (Pchlide) to chlorophyllide (Chlide), a key regulatory step in the chlorophyll biosynthesis pathway. As POR is light activated, it allows intermediates in the reaction pathway to be observed by initiat...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0268448

    authors: Heyes DJ,Ruban AV,Hunter CN

    更新日期:2003-01-21 00:00:00

  • Regulation of the concentration of pre beta high-density lipoprotein in normal plasma by cell membranes and lecithin-cholesterol acyltransferase activity.

    abstract::A minor fraction of plasma high-density lipoprotein (pre beta-1 HDL) has been shown to promote cholesterol efflux from peripheral cell membranes [Castro, G. R., & Fielding, C. J. (1988) Biochemistry 27, 25-29]. When isolated native plasma is incubated at 37 degrees C, this fraction is specifically decreased. On the ot...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00160a022

    authors: Miida T,Kawano M,Fielding CJ,Fielding PE

    更新日期:1992-11-17 00:00:00

  • Constructing de novo biosynthetic pathways for chemical synthesis inside living cells.

    abstract::Living organisms have evolved a vast array of catalytic functions that make them ideally suited for the production of medicinally and industrially relevant small-molecule targets. Indeed, native metabolic pathways in microbial hosts have long been exploited and optimized for the scalable production of both fine and co...

    journal_title:Biochemistry

    pub_type: 杂志文章,评审

    doi:10.1021/bi200416g

    authors: Weeks AM,Chang MC

    更新日期:2011-06-21 00:00:00

  • Structure of Helicobacter pylori catalase, with and without formic acid bound, at 1.6 A resolution.

    abstract::Helicobacter pylori produces one monofunctional catalase, encoded by katA (hp0875). The crystal structure of H. pylori catalase (HPC) has been determined and refined at 1.6 A with crystallographic agreement factors R and R(free) of 17.4 and 21.9%, respectively. The crystal exhibits P2(1)2(1)2 space group symmetry and ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi035663i

    authors: Loewen PC,Carpena X,Rovira C,Ivancich A,Perez-Luque R,Haas R,Odenbreit S,Nicholls P,Fita I

    更新日期:2004-03-23 00:00:00

  • Structure and polymorphism of saturated monoacid 1,2-diacyl-sn-glycerols.

    abstract::The 1,2-diacyl-sn-glycerols (1,2-DGs) are the predominant naturally occurring isomer found in cell membranes, lipid droplets, and lipoproteins. They are involved in the metabolism of monoacylglycerols, triacylglycerols, and phospholipids. The 1,2-DGs participate in the activation of protein kinase C, in phosphorylatio...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00500a008

    authors: Kodali DR,Fahey DA,Small DM

    更新日期:1990-12-04 00:00:00

  • Measurement of DNA-protein equilibria using gel chromatography: application to the HinfI restriction endonuclease.

    abstract::A method is described for measuring equilibrium constants of DNA-protein interactions using gel chromatography. This technique has been used to study the sequence-specific interaction of the HinfI restriction endonuclease with DNA. HinfI has a monomeric molecular weight of 31000 and exists as a dimer in its active for...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00333a037

    authors: Frankel AD,Ackers GK,Smith HO

    更新日期:1985-06-04 00:00:00

  • Catalytic function and local proton structure at the type 2 copper of nitrite reductase: the correlation of enzymatic pH dependence, conserved residues, and proton hyperfine structure.

    abstract::Electron nuclear double resonance (ENDOR) of protons at Type 2 and Type 1 cupric active sites correlates with the enzymatic pH dependence, the mutation of nearby conserved, nonligating residues, and electron transfer in heterologously expressed Rhodobacter sphaeroides nitrite reductase. Wild-type enzyme showed a pH 6 ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0256274

    authors: Zhao Y,Lukoyanov DA,Toropov YV,Wu K,Shapleigh JP,Scholes CP

    更新日期:2002-06-11 00:00:00

  • Biochemical properties of phosphatidylcholine-binding proteins that share common antigenic determinants with Fc gamma 2b receptor.

    abstract::Biochemical and immunological properties of biosynthetically radiolabeled phosphatidylcholine-(PC-) binding proteins were investigated. The PC-binding proteins were extracted from the detergent lysate of biosynthetically radiolabeled P388D1 cells by affinity chromatography on PC-Sepharose and filtered through a Sephad...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00329a014

    authors: Fernandez-Botran R,Suzuki T

    更新日期:1985-04-09 00:00:00

  • Chimeric human calcitonin and glucagon receptors reveal two dissociable calcitonin interaction sites.

    abstract::Two chimeric receptors were constructed by transposing the coding regions for the putative N-terminal domains of the human calcitonin (hCTR) and glucagon (hGGR) receptors. These receptors were stably expressed as glycosylated proteins with molecular masses of 80 kDa for the calcitonin receptor N-terminus chimera (NtCT...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00003a040

    authors: Stroop SD,Kuestner RE,Serwold TF,Chen L,Moore EE

    更新日期:1995-01-24 00:00:00

  • Energy landscape of the Michaelis complex of lactate dehydrogenase: relationship to catalytic mechanism.

    abstract::Lactate dehydrogenase (LDH) catalyzes the interconversion between pyruvate and lactate with nicotinamide adenine dinucleotide (NAD) as a cofactor. Using isotope-edited difference Fourier transform infrared spectroscopy on the "live" reaction mixture (LDH·NADH·pyruvate ⇌ LDH·NAD(+)·lactate) for the wild-type protein an...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi500215a

    authors: Peng HL,Deng H,Dyer RB,Callender R

    更新日期:2014-03-25 00:00:00