A kinetic and allosteric model for the acetylcholine transporter-vesamicol receptor in synaptic vesicles.

Abstract:

:The ligand binding relationship between the acetylcholine transporter (AcChT) and the vesamicol receptor (VR) and the kinetics of active transport were studied in synaptic vesicles purified from the Torpedo electric organ using analogues of AcCh and vesamicol. Methoxyvesamicol, which should exhibit better equilibration properties for kinetics measurements than the more potent parent, inhibits active transport in a nonlinear noncompetitive manner. AcCh analogues competitively inhibit binding of [3H]vesamicol with higher affinity in hyposmotically lysed vesicle ghosts than in intact vesicles, apparently due to removal of a competing internal, osmotically active factor. AcCh and actively transported analogues of AcCh that are up to 57% larger in van der Waals volume exhibit up to a 200-fold ratio for the dissociation constant measured by inhibition of vesamicol binding to ghosts (KIAg) compared to the Michaelis constant for transport (KM) or the IC50 value for inhibition of [3H]AcCh active transport. In contrast, two AcCh analogues that are about 120% larger and that almost surely are not transported exhibit a KIAg/IC50 ratio of about 1. The data demonstrate that the vesamicol family of compounds binds to an allosteric site in the AcChT. Initiation of active transport has no apparent effect on the affinities of vesamicol and AcCh analogues, which suggests that most of the AcChT-VR in purified vesicles is transport incompetent. Vesicle ghosts actively transport [3H]AcCh nearly as well as intact vesicles, which suggests that internal factor does not affect transport-competent AcChT-VR. A kinetics model is proposed that predicts that AcCh analogues exhibiting a KIAg/IC50 ratio significantly greater than 1 are actively transported. Some of the microscopic constants in the model are estimated. The AcChT binds AcCh very weakly with a dissociation constant of about 20-50 mM, but it transports substrates rapidly in a process exhibiting remarkably little selectivity for the detailed shape and volume of the transported ion.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Bahr BA,Clarkson ED,Rogers GA,Noremberg K,Parsons SM

doi

10.1021/bi00140a010

subject

Has Abstract

pub_date

1992-06-30 00:00:00

pages

5752-62

issue

25

eissn

0006-2960

issn

1520-4995

journal_volume

31

pub_type

杂志文章
  • Electron transfer in reaction center core complexes from the green sulfur bacteria Prosthecochloris aestuarii and Chlorobium tepidum.

    abstract::Electron transfer in reaction center core (RCC) complexes from the green sulfur bacteria Prosthecochloris aestuarii and Chlorobium tepidum was studied by measuring flash-induced absorbance changes. The first preparation contained approximately three iron-sulfur centers, indicating that the three putative electron acce...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi992861u

    authors: Schmidt KA,Neerken S,Permentier HP,Hager-Braun C,Amesz J

    更新日期:2000-06-20 00:00:00

  • Reactions of 4-oxalocrotonate tautomerase and YwhB with 3-halopropiolates: analysis and implications.

    abstract::4-Oxalocrotonate tautomerase (4-OT) and YwhB, a 4-OT homologue found in Bacillus subtilis, exhibit a low level hydratase activity that converts trans-3-haloacrylates to acetaldehyde, presumably through a malonate semialdehyde intermediate. The mechanism for the initial transformation of the 3-haloacrylate to malonate ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi035495u

    authors: Wang SC,Johnson WH Jr,Czerwinski RM,Whitman CP

    更新日期:2004-01-27 00:00:00

  • Ethanol enhances agonist-induced fast desensitization in nicotinic acetylcholine receptors.

    abstract::The reversible decline of the nicotinic acetylcholine receptor's response to acetylcholine during prolonged exposure to acetylcholine is known as desensitization. Here, we studied ethanol's modulation of fast agonist-induced desensitization of the nicotinic acetylcholine receptor in postsynaptic membrane vesicles from...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00197a009

    authors: Wu G,Miller KW

    更新日期:1994-08-09 00:00:00

  • Interpretation of the doublet at 850 and 830 cm-1 in the Raman spectra of tyrosyl residues in proteins and certain model compounds.

    abstract::The doublet at 850 and 830 cm-1 in the Raman spectra of proteins containing tyrosyl residues has been examined as to its origin and the relation of its components to the environment of the phenyl ring, the state of the phenolic hydroxyl group, and the conformation of the amino acid backbone. Raman spectral studies on ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00693a014

    authors: Siamwiza MN,Lord RC,Chen MC,Takamatsu T,Harada I,Matsuura H,Shimanouchi T

    更新日期:1975-11-04 00:00:00

  • A single-molecule view of the assembly pathway, subunit stoichiometry, and unwinding activity of the bacteriophage T4 primosome (helicase-primase) complex.

    abstract::Single-molecule fluorescence resonance energy transfer (smFRET) methods were used to study the assembly pathway and DNA unwinding activity of the bacteriophage T4 helicase-primase (primosome) complex. The helicase substrates used were surface-immobilized model DNA replication forks "internally" labeled in the duplex r...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi400231s

    authors: Lee W,Jose D,Phelps C,Marcus AH,von Hippel PH

    更新日期:2013-05-07 00:00:00

  • Modulator protein as a component of the myosin light chain kinase from chicken gizzard.

    abstract::The Ca2+-dependent regulation of smooth muscle actomyosin involves a myosin light chain kinase (ATP: myosin light chain phosphotransferase). It has been shown (Dabrowska, R., Aromatorio, D., Sherry, J.M.F., and Hartshorne, D.J. 1977, Biochem. Biophys. Res. Commun. 78, 1263) that the kinase is composed of two proteins ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00595a010

    authors: Dabrowska R,Sherry JM,Aromatorio DK,Hartshorne DJ

    更新日期:1978-01-24 00:00:00

  • Albumin-bound quercetin repairs vitamin E oxidized by apolipoprotein radicals in native HDL3 and LDL.

    abstract::In the minor fraction of HDL3 containing alpha-tocopherol (alphaTocOH), selective one-electron oxidation of Trp and Tyr residues of apolipoproteins A-I and A-II by *Br2- radical-anions produces the corresponding semioxidized species, TyrO* and *Trp. Repair of TyrO* by endogenous alphaTocOH generates the alpha-tocopher...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi701419d

    authors: Filipe P,Patterson LK,Bartels DM,Hug GL,Freitas JP,Mazière JC,Santus R,Morlière P

    更新日期:2007-12-11 00:00:00

  • Isomers of human alpha-synuclein stabilized by disulfide bonds exhibit distinct structural and aggregative properties.

    abstract::The discovery of three mutants in the -synuclein (alphaSyn) gene and the identification of alphaSyn as the major component of Lewy body have opened a new field for understanding the pathogenesis of Parkinson's disease (PD). AlphaSyn is a natively unfolded protein with unknown function and unspecified conformational he...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi062068i

    authors: Jiang C,Chang JY

    更新日期:2007-01-16 00:00:00

  • NMR structure of navel orangeworm moth pheromone-binding protein (AtraPBP1): implications for pH-sensitive pheromone detection.

    abstract::The navel orangeworm, Amyelois transitella (Walker), is an agricultural insect pest that can be controlled by disrupting male-female communication with sex pheromones, a technique known as mating disruption. Insect pheromone-binding proteins (PBPs) provide fast transport of hydrophobic pheromones through the aqueous s...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9020132

    authors: Xu X,Xu W,Rayo J,Ishida Y,Leal WS,Ames JB

    更新日期:2010-02-23 00:00:00

  • A glutamic acid specific serine protease utilizes a novel histidine triad in substrate binding.

    abstract::Proteases specific for cleavage after acidic residues have been implicated in several disease states, including epidermolysis, inflammation, and viral processing. A serine protease with specificity toward glutamic acid substrates (Glu-SGP) has been crystallized in the presence of a tetrapeptide ligand and its structur...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00094a001

    authors: Nienaber VL,Breddam K,Birktoft JJ

    更新日期:1993-11-02 00:00:00

  • Identification of the catalytic nucleophile of tRNA (m5U54)methyltransferase.

    abstract::A covalent complex between tRNA (m5U54)methyltransferase, 5-fluorouridine tRNA(Phe), and S-adenosyl-L-[methyl-3H]methionine was formed in vitro and purified. Previously, it was shown that in this complex the 6-position of fluorouridine-54 is covalently linked to a catalytic nucleophile and the 5-position is bound to t...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00104a022

    authors: Kealey JT,Santi DV

    更新日期:1991-10-08 00:00:00

  • Phenylthiazolyl-hydrazide and its derivatives are potent inhibitors of tau aggregation and toxicity in vitro and in cells.

    abstract::One of the key pathological features of Alzheimer's disease is the aggregation of tau protein. We are therefore searching for compounds capable of inhibiting this reaction. On the basis of an initial screen of 200000 compounds [Pickhardt, M., Gazova, Z., von Bergen, M., Khlistunova, I., Wang, Y., Hascher, A., Mandelko...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi700878g

    authors: Pickhardt M,Larbig G,Khlistunova I,Coksezen A,Meyer B,Mandelkow EM,Schmidt B,Mandelkow E

    更新日期:2007-09-04 00:00:00

  • Phosphinothricin-tripeptide synthetases from Streptomyces viridochromogenes.

    abstract::Phosphinothricyl-alanyl-alanine (Pt tripeptide (Ptt), bialaphos) is a metabolite produced by Streptomyces viridochromogenes and Streptomyces hygroscopicus. It contains the unique phosphinoamino acid phosphinothricin (Pt), which after cleavage from Ptt is active as an inhibitor of glutamine synthetase. We have isolated...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9719410

    authors: Grammel N,Schwartz D,Wohlleben W,Keller U

    更新日期:1998-02-10 00:00:00

  • Slow binding inhibition of S-adenosylmethionine synthetase by imidophosphate analogues of an intermediate and product.

    abstract::S-Adenosylmethionine (AdoMet) synthetase catalyzes the only known route of biosynthesis of the primary in vivo alkylating agent. Inhibitors of this enzyme could provide useful modifiers of biological methylation and polyamine biosynthetic processes. The AdoMet synthetase catalyzed reaction converts ATP and L-methionin...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi990528k

    authors: Reczkowski RS,Markham GD

    更新日期:1999-07-13 00:00:00

  • Differential induction of pS2 and cathepsin D mRNAs by structurally altered estrogens.

    abstract::The influence of structural alterations to the estradiol-17 beta (E2) molecule on the induction of pS2 and Cathepsin D (Cath D) mRNAs has been examined by Northern analysis of RNA extracted from MCF-7 cells. Exposure of cultures to estratriene did not affect the level of expression of these estrogen-responsive genes. ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00078a028

    authors: Pilat MJ,Hafner MS,Kral LG,Brooks SC

    更新日期:1993-07-13 00:00:00

  • Phosphoprotein and phosphopeptide interactions with the FHA domain from Arabidopsis kinase-associated protein phosphatase.

    abstract::FHA domains are phosphoThr recognition modules found in diverse signaling proteins, including kinase-associated protein phosphatase (KAPP) from Arabidopsis thaliana. The kinase-interacting FHA domain (KI-FHA) of KAPP targets it to function as a negative regulator of some receptor-like kinase (RLK) signaling pathways i...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi061763n

    authors: Ding Z,Wang H,Liang X,Morris ER,Gallazzi F,Pandit S,Skolnick J,Walker JC,Van Doren SR

    更新日期:2007-03-13 00:00:00

  • Mechanism of the intramolecular Claisen condensation reaction catalyzed by MenB, a crotonase superfamily member.

    abstract::MenB, the 1,4-dihydroxy-2-naphthoyl-CoA synthase from the bacterial menaquinone biosynthesis pathway, catalyzes an intramolecular Claisen condensation (Dieckmann reaction) in which the electrophile is an unactivated carboxylic acid. Mechanistic studies on this crotonase family member have been hindered by partial acti...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi200877x

    authors: Li HJ,Li X,Liu N,Zhang H,Truglio JJ,Mishra S,Kisker C,Garcia-Diaz M,Tonge PJ

    更新日期:2011-11-08 00:00:00

  • Effects of certain 5'-substituted adenosines on polyamine synthesis: selective inhibitors of spermine synthase.

    abstract::A number of nucleosides related to S-adenosylmethionine were tested for their inhibitory action on three enzymes involved in the biosynthesis of polyamines. The particular objective of the experiments was to determine whether any of the compounds could be used as selective inhibitors of the synthesis of spermine by sp...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00362a016

    authors: Pegg AE,Coward JK,Talekar RR,Secrist JA 3rd

    更新日期:1986-07-15 00:00:00

  • Simulation-based prediction of phosphatidylinositol 4,5-bisphosphate binding to an ion channel.

    abstract::Protein-lipid interactions regulate many membrane protein functions. Using a multiscale approach that combines coarse-grained and atomistic molecular dynamics simulations, we have predicted the binding site for the anionic phospholipid phosphatidylinositol 4,5-bisphosphate (PIP(2)) on the Kir2.2 inwardly rectifying (K...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi301350s

    authors: Schmidt MR,Stansfeld PJ,Tucker SJ,Sansom MS

    更新日期:2013-01-15 00:00:00

  • Stereospecific binding of diastereomeric peptides to salmon sperm deoxyribonucleic acid. Further evidence for partial intercalation.

    abstract::A series of diastereomeric dipeptide amides, containing an N-terminal L-lysyl residue and a C-terminal L- or D-amino acid with a derivatized aromatic ring on the side chain, was synthesized to determine the dependence of (1) the chirality of the N-terminal amino acid alpha-carbon and (2) the length of the N-terminal a...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00278a005

    authors: Sheardy RD,Gabbay EJ

    更新日期:1983-04-26 00:00:00

  • Amyloid formation via supramolecular peptide assemblies.

    abstract::Amyloid fibrils have been classically defined as linear, nonbranched polymeric proteins with a cross beta-sheet structure and the ability to alter the optical properties of the amyloid-specific dye Congo Red. Mounting evidence suggests that soluble oligomeric peptide assemblies approximately 2-20 nm in diameter are cr...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi700247y

    authors: Moore RA,Hayes SF,Fischer ER,Priola SA

    更新日期:2007-06-19 00:00:00

  • Copurification of the FpvA ferric pyoverdin receptor of Pseudomonas aeruginosa with its iron-free ligand: implications for siderophore-mediated iron transport.

    abstract::The Pseudomonas aeruginosa FpvA receptor is a TonB-dependent outer membrane transport protein that catalyzes uptake of ferric pyoverdin across the outer membrane. Surprisingly, FpvA expressed in P. aeruginosa grown in an iron-deficient medium copurifies with a ligand X that we have characterized by UV, fluorescence, a...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi990421x

    authors: Schalk IJ,Kyslik P,Prome D,van Dorsselaer A,Poole K,Abdallah MA,Pattus F

    更新日期:1999-07-20 00:00:00

  • Enzyme Architecture: A Startling Role for Asn270 in Glycerol 3-Phosphate Dehydrogenase-Catalyzed Hydride Transfer.

    abstract::The side chains of R269 and N270 interact with the phosphodianion of dihydroxyacetone phosphate (DHAP) bound to glycerol 3-phosphate dehydrogenase (GPDH). The R269A, N270A, and R269A/N270A mutations of GPDH result in 9.1, 5.6, and 11.5 kcal/mol destabilization, respectively, of the transition state for GPDH-catalyzed ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.6b00116

    authors: Reyes AC,Amyes TL,Richard JP

    更新日期:2016-03-15 00:00:00

  • Amino Acid Selective 13C Labeling and 13C Scrambling Profile Analysis of Protein α and Side-Chain Carbons in Escherichia coli Utilized for Protein Nuclear Magnetic Resonance.

    abstract::Amino acid selective isotope labeling is an important nuclear magnetic resonance technique, especially for larger proteins, providing strong bases for the unambiguous resonance assignments and information concerning the structure, dynamics, and intermolecular interactions. Amino acid selective 15N labeling suffers fro...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.8b00182

    authors: Sugiki T,Furuita K,Fujiwara T,Kojima C

    更新日期:2018-07-03 00:00:00

  • Structural domains of apolipoprotein(a) and its interaction with apolipoprotein B-100 in the lipoprotein(a) particle.

    abstract::The structural domains of human apolipoprotein(a) [apo(a)] and its interaction with apolipoprotein B-100 (apo B-100) in the lipoprotein(a) [Lp(a)] particle were investigated by limited proteolysis with thermolysin and cathepsin D. We characterized the proteolytic products by sodium dodecyl sulfate-polyacrylamide gradi...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00177a026

    authors: Huby T,Doucet C,Dieplinger H,Chapman J,Thillet J

    更新日期:1994-03-22 00:00:00

  • Mechanistic insights from the binding of substrate and carbocation intermediate analogues to aristolochene synthase.

    abstract::Aristolochene synthase, a metal-dependent sesquiterpene cyclase from Aspergillus terreus, catalyzes the ionization-dependent cyclization of farnesyl diphosphate (FPP) to form the bicyclic eremophilane (+)-aristolochene with perfect structural and stereochemical precision. Here, we report the X-ray crystal structure of...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi400691v

    authors: Chen M,Al-lami N,Janvier M,D'Antonio EL,Faraldos JA,Cane DE,Allemann RK,Christianson DW

    更新日期:2013-08-13 00:00:00

  • Neoprontosil binding to carbonic anhydrase. Reasonance Raman and other studies on the ionization behavior of the sulfonamide.

    abstract::Alkalimetric, spectrophotometric, NMR, and resonance Raman titrations are reported for the sulfonamide Neoprontosil in aqueous solution. An assignment of the magnetic resonance peaks for each of the Neoprontosil protons has been made. Neoprontosil is shown to have two "coupled" iity of the microscopic pKs for these tw...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00580a024

    authors: Carey PR,King RW

    更新日期:1979-06-26 00:00:00

  • Influence of cytosolic AGS3 on receptor--G protein coupling.

    abstract::Activator of G protein signaling 3 (AGS3) activates the Gbetagamma mating pathway in yeast in a manner that is independent of heptahelical receptors. It competes with Gbetagamma subunits to bind GDP-bound Gi/o(alpha) subunits via four repeated G protein regulatory (GPR) domains in the carboxyl-terminal half of the mol...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi034561p

    authors: Ma H,Peterson YK,Bernard ML,Lanier SM,Graber SG

    更新日期:2003-07-08 00:00:00

  • Substrate-induced conformational changes in Escherichia coli taurine/alpha-ketoglutarate dioxygenase and insight into the oligomeric structure.

    abstract::The enzymes in the alpha-ketoglutarate (alphaKG) dependent dioxygenase superfamily represent the largest class of non-heme iron oxidases and have important medical, ecological, and biotechnological roles. One such enzyme, taurine/alpha-ketoglutarate dioxygenase (TauD), catalyzes the conversion of 2-aminoethanesulfonat...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0341096

    authors: O'Brien JR,Schuller DJ,Yang VS,Dillard BD,Lanzilotta WN

    更新日期:2003-05-20 00:00:00

  • Radical redesign of a tandem array of four R67 dihydrofolate reductase genes yields a functional, folded protein possessing 45 substitutions.

    abstract::R67 dihydrofolate reductase (DHFR) is a plasmid-encoded, type II enzyme. Four monomers (78 amino acids long) assemble into a homotetramer possessing 222 symmetry. In previous studies, a tandem array of four R67 DHFR gene copies was fused in frame to generate a functional monomer named Quad1. This protein possessed the...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi1005943

    authors: Feng J,Grubbs J,Dave A,Goswami S,Horner CG,Howell EE

    更新日期:2010-08-31 00:00:00