Transcriptome analysis of all two-component regulatory system mutants of Escherichia coli K-12.

Abstract:

:We have systematically examined the mRNA profiles of 36 two-component deletion mutants, which include all two-component regulatory systems of Escherichia coli, under a single growth condition. DNA microarray results revealed that the mutants belong to one of three groups based on their gene expression profiles in Luria-Bertani broth under aerobic conditions: (i) those with no or little change; (ii) those with significant changes; and (iii) those with drastic changes. Under these conditions, the anaeroresponsive ArcB/ArcA system, the osmoresponsive EnvZ/OmpR system and the response regulator UvrY showed the most drastic changes. Cellular functions such as flagellar synthesis and expression of the RpoS regulon were affected by multiple two-component systems. A high correlation coefficient of expression profile was found between several two-component mutants. Together, these results support the view that a network of functional interactions, such as cross-regulation, exists between different two-component systems. The compiled data are avail-able at our website (http://ecoli.aist-nara.ac.jp/xp_analysis/ 2_components).

journal_name

Mol Microbiol

journal_title

Molecular microbiology

authors

Oshima T,Aiba H,Masuda Y,Kanaya S,Sugiura M,Wanner BL,Mori H,Mizuno T

doi

10.1046/j.1365-2958.2002.03170.x

subject

Has Abstract

pub_date

2002-10-01 00:00:00

pages

281-91

issue

1

eissn

0950-382X

issn

1365-2958

pii

3170

journal_volume

46

pub_type

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