Checkpoints in the progression of autoimmune disease: lessons from diabetes models.

abstract：:When an algorithm in dimension one is extended to dimension d, in nearly every case its computational cost is taken to the power d. This fundamental difficulty is the single greatest impediment to solving many important problems and has been dubbed the curse of dimensionality. For numerical analysis in dimension d, we...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Beylkin G,Mohlenkamp MJ

更新日期：2002-08-06 00:00:00

abstract：:Far-red radiation (FR) reflected by green tissues is a key signal that plants use to detect the proximity of future competitors. Perception of increased levels of FR elicits a suite of responses collectively known as the shade-avoidance syndrome, which includes increased stem elongation, production of erect leaves, an...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Izaguirre MM,Mazza CA,Biondini M,Baldwin IT,Ballaré CL

更新日期：2006-05-02 00:00:00

abstract：:The insect gut microbiota plays crucial roles in modulating the interactions between the host and intestinal pathogens. Unlike viruses, bacteria, and parasites, which need to be ingested to cause disease, entomopathogenic fungi infect insects through the cuticle and proliferate in the hemolymph. However, interactions ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Wei G,Lai Y,Wang G,Chen H,Li F,Wang S

更新日期：2017-06-06 00:00:00

abstract：:The prediction of binding sites and the understanding of interfaces associated with protein complexation remains an open problem in molecular biophysics. This work shows that a crucial factor in predicting and rationalizing protein-protein interfaces can be inferred by assessing the extent of intramolecular desolvatio...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Fernández A,Scheraga HA

更新日期：2003-01-07 00:00:00

abstract：:Nuclear factor kappaB (NF-kappaB) transcription factors regulate genes responsible for critical cellular processes. IkappaBalpha, -beta, and -epsilon bind to NF-kappaBs and inhibit their transcriptional activity. The NF-kappaB-binding domains of IkappaBs contain six ankyrin repeats (ARs), which adopt a beta-hairpin/al...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Truhlar SM,Torpey JW,Komives EA

更新日期：2006-12-12 00:00:00

abstract：:C factor, an intercellular signaling protein, is required for aggregation and sporulation of the social bacterium, Myxococcus xanthus. We report that C factor, which normally is associated with the cell surface, provides input to the Frz signal transduction cascade. Elements of this cascade have sequence homology to b...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Søgaard-Andersen L,Kaiser D

更新日期：1996-04-02 00:00:00

abstract：:The growth or decay of population of a single species interacting with a large number of other species (or environment) according to the Volterra-Lotka model is investigated. When the environment is initially very close to its equilibrium level, the growth of a single species follows a generalized Verhulst law, contai...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Zwanzig R

更新日期：1973-11-01 00:00:00

abstract：:In humans, septal defects are among the most prevalent congenital heart diseases, but their cellular and molecular origins are not fully understood. We report that transcription factor Tbx5 is present in a subpopulation of endocardial cells and that its deletion therein results in fully penetrant, dose-dependent atria...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Nadeau M,Georges RO,Laforest B,Yamak A,Lefebvre C,Beauregard J,Paradis P,Bruneau BG,Andelfinger G,Nemer M

更新日期：2010-11-09 00:00:00

abstract：:The transcription factor NFAT5/TonEBP, a member of the NFAT/Rel family of transcription factors, has been implicated in diverse cellular responses, including the response to osmotic stress, integrin-dependent cell migration, T cell activation, and the Ras pathway in Drosophila. To clarify the in vivo role of NFAT5, we...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： López-Rodríguez C,Antos CL,Shelton JM,Richardson JA,Lin F,Novobrantseva TI,Bronson RT,Igarashi P,Rao A,Olson EN

更新日期：2004-02-24 00:00:00

abstract：:The bacterial pathogen Pseudomonas tolaasii severely damages white button mushrooms by secretion of the pore-forming toxin tolaasin, the main virulence factor of brown blotch disease. Yet, fungus-associated helper bacteria of the genus Mycetocola (Mycetocola tolaasinivorans and Mycetocola lacteus) may protect their ho...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Hermenau R,Kugel S,Komor AJ,Hertweck C

更新日期：2020-09-22 00:00:00

abstract：:Methionine sulfoxide reductase A (MsrA) catalyzes the reduction of methionine sulfoxide to methionine and is specific for the S epimer of methionine sulfoxide. The enzyme participates in defense against oxidative stresses by reducing methionine sulfoxide residues in proteins back to methionine. Because oxidation of me...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Lim JC,You Z,Kim G,Levine RL

更新日期：2011-06-28 00:00:00

abstract：:In the yeast Saccharomyces cerevisiae, mutations in either of two unlinked genes, RAM1 or RAM2, abolish the farnesyltransferase activity responsible for prenylation of Ras proteins and the a-factor mating pheromone. Here we report that the function of RAM1 and RAM2 genes is required for the membrane localization of Ra...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： He B,Chen P,Chen SY,Vancura KL,Michaelis S,Powers S

更新日期：1991-12-15 00:00:00

abstract：:The complexed (ribosome-bearing) membrane fraction of Bacillus subtilis contains several proteins (CM-proteins) that are virtually absent from the ribosome-free fraction and hence might be components of the apparatus of protein secretion. We have determined, by trypsin digestion and by labeling with a nonpenetrating r...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Horiuchi S,Tai PC,Davis BD

更新日期：1983-06-01 00:00:00

abstract：:The epithelial-derived cytokine thymic stromal lymphopoietin (TSLP) is important for the initiation of allergic airway inflammation through a dendritic cell-mediated T helper 2 response. To identify the factors that control TSLP expression, we examined the ability of inflammatory mediators to regulate TSLP production ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Lee HC,Ziegler SF

更新日期：2007-01-16 00:00:00

abstract：:Message passing is a fundamental technique for performing calculations on networks and graphs with applications in physics, computer science, statistics, and machine learning, including Bayesian inference, spin models, satisfiability, graph partitioning, network epidemiology, and the calculation of matrix eigenvalues....

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Cantwell GT,Newman MEJ

更新日期：2019-11-19 00:00:00

abstract：:Plant soil specialists contribute greatly to global diversity; however, the ecoevolutionary forces responsible for generating this diversity are poorly understood. We integrate molecular phylogenies with descriptive and experimental ecological data, creating a powerful framework with which to elucidate forces driving ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Cacho NI,Strauss SY

更新日期：2014-10-21 00:00:00

abstract：:Rad51 is the primary eukaryotic recombinase responsible for initiating DNA strand exchange during homologous recombination. Although the subject of intense study for over a decade, many molecular details of the reactions promoted by Rad51 and related recombinases remain unknown. Using total internal reflection fluores...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Granéli A,Yeykal CC,Robertson RB,Greene EC

更新日期：2006-01-31 00:00:00

abstract：:Bacteriophage lambda encodes a number of genes involved in the recombinational repair of DNA double-strand breaks. The product of one of these genes, rap, has been purified. Truncated Rap proteins that copurify with the full-length form are derived, at least in part, from a rho-dependent transcription terminator locat...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Sharples GJ,Corbett LM,Graham IR

更新日期：1998-11-10 00:00:00

abstract：:Eukaryotic translation initiation factor (eIF) 5 is crucial for the assembly of the eukaryotic preinitiation complex. This activity is mediated by the ability of its C-terminal HEAT domain to interact with eIF1, eIF2, and eIF3 in the multifactor complex and with eIF4G in the 48S complex. However, the binding sites for...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Yamamoto Y,Singh CR,Marintchev A,Hall NS,Hannig EM,Wagner G,Asano K

更新日期：2005-11-08 00:00:00

abstract：:Purified human platelet-derived growth factor (PDGF) induces an increase in amino acid uptake via system A in quiescent human diploid fibroblasts. Cells must be exposed to PDGF for 45 min to obtain maximum transport stimulation. Transport stimulation requires protein synthesis. Transient exposure to PDGF, alone, in th...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Owen AJ 3rd,Geyer RP,Antoniades HN

更新日期：1982-05-01 00:00:00

abstract：:The mechanistic basis for chloroquine resistance (CQR) in Plasmodium falciparum recently has been linked to the polymorphic gene pfcrt. Alleles associated with CQR in natural parasite isolates harbor threonine (T), as opposed to lysine (K) at amino acid 76. P. falciparum CQR strains of African and Southeast Asian orig...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Mehlotra RK,Fujioka H,Roepe PD,Janneh O,Ursos LM,Jacobs-Lorena V,McNamara DT,Bockarie MJ,Kazura JW,Kyle DE,Fidock DA,Zimmerman PA

更新日期：2001-10-23 00:00:00

abstract：:Sparse sensor placement is a central challenge in the efficient characterization of complex systems when the cost of acquiring and processing data is high. Leading sparse sensing methods typically exploit either spatial or temporal correlations, but rarely both. This work introduces a sparse sensor optimization that i...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Mohren TL,Daniel TL,Brunton SL,Brunton BW

更新日期：2018-10-16 00:00:00

abstract：:Genetic variation in the serotonin transporter gene (SLC6A4) is associated with vulnerability to affective disorders and pharmacotherapy efficacy. We recently identified sequence polymorphisms in the common marmoset SLC6A4 repeat region (AC/C/G and CT/T/C) associated with individual differences in anxiety-like trait, ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Santangelo AM,Sawiak SJ,Fryer T,Hong Y,Shiba Y,Clarke HF,Riss PJ,Ferrari V,Tait R,Suckling J,Aigbirhio FI,Roberts AC

更新日期：2019-07-16 00:00:00

abstract：:To study the behavior of hematopoietic stem cells in vivo, we transplanted glucose-6-phosphate dehydrogenase (G6PD) heterozygous (female Safari) cats with small amounts of autologous marrow. The G6PD phenotypes of erythroid burst-forming units and granulocyte/macrophage colony-forming units were repeatedly assayed for...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Abkowitz JL,Persik MT,Shelton GH,Ott RL,Kiklevich JV,Catlin SN,Guttorp P

更新日期：1995-03-14 00:00:00

abstract：:IFN-gamma treatment of cells leads to tyrosine phosphorylation of signal transducer and activator of transcription (STAT) 1 followed by dimerization through a reciprocal Src homology 2-phosphotyrosine interaction near the -COOH end of each monomer, forming a parallel structure that accumulates in the nucleus to drive ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Zhong M,Henriksen MA,Takeuchi K,Schaefer O,Liu B,ten Hoeve J,Ren Z,Mao X,Chen X,Shuai K,Darnell JE Jr

更新日期：2005-03-15 00:00:00

abstract：:The Etruscans, the only preclassical European population that has been genetically characterized so far, share only two haplotypes with their modern geographic counterparts, the Tuscans, who, nonetheless, appear to be their closest relatives. We modeled 10 demographic scenarios spanning the last 2,500 years and tested...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Belle EM,Ramakrishnan U,Mountain JL,Barbujani G

更新日期：2006-05-23 00:00:00

abstract：:Negative elongation factor (NELF) and 5,6-dichloro-1-beta-D-ribofuranosylbenzimidazole sensitivity-inducing factor (DSIF) are involved in pausing RNA Polymerase II (Pol II) in the promoter-proximal region of the hsp70 gene in Drosophila, before heat shock induction. Such blocks in elongation are widespread in the Dros...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Missra A,Gilmour DS

更新日期：2010-06-22 00:00:00

abstract：:We report dynamic glycoprotein recognition of gels prepared by biomolecular imprinting using lectin and antibody molecules as ligands for tumor-specific marker glycoproteins. The glycoprotein-imprinted gels prepared with minute amounts of cross-linkers could dynamically recognize tumor-specific marker glycoproteins by...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Miyata T,Jige M,Nakaminami T,Uragami T

更新日期：2006-01-31 00:00:00

abstract：:Rivers around the world are being regulated by dams to accommodate the needs of a rapidly growing global population. These regulatory efforts usually oppose the natural tendency of rivers to flood, move sediment, and migrate. Although an economic benefit, river regulation has come at unforeseen and unevaluated cumulat...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Trush WJ,McBain SM,Leopold LB

更新日期：2000-10-24 00:00:00

abstract：:Genetic recombination provides an important mechanism for the repair of DNA double-strand breaks. Homologous pairing and strand exchange lead to the formation of DNA intermediates, in which sister chromatids or homologous chromosomes are covalently linked by four-way Holliday junctions (HJs). Depending on the type of ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Shah Punatar R,Martin MJ,Wyatt HD,Chan YW,West SC

更新日期：2017-01-17 00:00:00