Genomic instability in repeated sequences is an early somatic event in colorectal tumorigenesis that persists after transformation.

Abstract:

:Genomic instability at simple repeated sequences (SRS) is a landmark for some sporadic and hereditary cancers of the colon. We have identified several human tumour cell lines with up to 1,000-fold increases in mutation rates for endogenous microsatellite sequences, relative to normal cells or tumour cells without the mutator phenotype and show that they are very early events in tumorigenesis. Our in vivo and in vitro results show that the genomic instability persists after transformation and that microsatellite mutations accumulate as consecutive somatic slippage events of a single or a few repeated units. This mechanism may account for the repeat expansions in triplet hereditary diseases and the same defect in replication fidelity in non-polyposis colon cancer could also contribute to the non-mendelian anticipation in these diseases.

journal_name

Nat Genet

journal_title

Nature genetics

authors

Shibata D,Peinado MA,Ionov Y,Malkhosyan S,Perucho M

doi

10.1038/ng0394-273

subject

Has Abstract

pub_date

1994-03-01 00:00:00

pages

273-81

issue

3

eissn

1061-4036

issn

1546-1718

journal_volume

6

pub_type

杂志文章
  • A single-nucleotide polymorphism tagging set for human drug metabolism and transport.

    abstract::Interindividual variability in drug response, ranging from no therapeutic benefit to life-threatening adverse reactions, is influenced by variation in genes that control the absorption, distribution, metabolism and excretion of drugs. We genotyped 904 single-nucleotide polymorphisms (SNPs) from 55 such genes in two po...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/ng1488

    authors: Ahmadi KR,Weale ME,Xue ZY,Soranzo N,Yarnall DP,Briley JD,Maruyama Y,Kobayashi M,Wood NW,Spurr NK,Burns DK,Roses AD,Saunders AM,Goldstein DB

    更新日期:2005-01-01 00:00:00

  • Genome-wide meta-analysis identifies 56 bone mineral density loci and reveals 14 loci associated with risk of fracture.

    abstract::Bone mineral density (BMD) is the most widely used predictor of fracture risk. We performed the largest meta-analysis to date on lumbar spine and femoral neck BMD, including 17 genome-wide association studies and 32,961 individuals of European and east Asian ancestry. We tested the top BMD-associated markers for repli...

    journal_title:Nature genetics

    pub_type: 杂志文章,meta分析

    doi:10.1038/ng.2249

    authors: Estrada K,Styrkarsdottir U,Evangelou E,Hsu YH,Duncan EL,Ntzani EE,Oei L,Albagha OM,Amin N,Kemp JP,Koller DL,Li G,Liu CT,Minster RL,Moayyeri A,Vandenput L,Willner D,Xiao SM,Yerges-Armstrong LM,Zheng HF,Alonso N,E

    更新日期:2012-04-15 00:00:00

  • Publisher Correction: Multiancestry genome-wide association study of 520,000 subjects identifies 32 loci associated with stroke and stroke subtypes.

    abstract::An amendment to this paper has been published and can be accessed via a link at the top of the paper. ...

    journal_title:Nature genetics

    pub_type: 已发布勘误

    doi:10.1038/s41588-019-0449-0

    authors: Malik R,Chauhan G,Traylor M,Sargurupremraj M,Okada Y,Mishra A,Rutten-Jacobs L,Giese AK,van der Laan SW,Gretarsdottir S,Anderson CD,Chong M,Adams HHH,Ago T,Almgren P,Amouyel P,Ay H,Bartz TM,Benavente OR,Bevan S,Bon

    更新日期:2019-07-01 00:00:00

  • A genome-wide association study identifies new susceptibility loci for esophageal adenocarcinoma and Barrett's esophagus.

    abstract::Esophageal adenocarcinoma is a cancer with rising incidence and poor survival. Most such cancers arise in a specialized intestinal metaplastic epithelium, which is diagnostic of Barrett's esophagus. In a genome-wide association study, we compared esophageal adenocarcinoma cases (n = 2,390) and individuals with precanc...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/ng.2796

    authors: Levine DM,Ek WE,Zhang R,Liu X,Onstad L,Sather C,Lao-Sirieix P,Gammon MD,Corley DA,Shaheen NJ,Bird NC,Hardie LJ,Murray LJ,Reid BJ,Chow WH,Risch HA,Nyrén O,Ye W,Liu G,Romero Y,Bernstein L,Wu AH,Casson AG,Chano

    更新日期:2013-12-01 00:00:00

  • Polygenic control of autoimmune diabetes in nonobese diabetic mice.

    abstract::Partial exclusion mapping of the nonobese (NOD) diabetic mouse genome has shown linkage of diabetes to at least five different chromosomes. We have now excluded almost all of the genome for the presence of susceptibility genes with fully recessive effects and have obtained evidence of linkage of ten distinct loci to d...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/ng0893-404

    authors: Ghosh S,Palmer SM,Rodrigues NR,Cordell HJ,Hearne CM,Cornall RJ,Prins JB,McShane P,Lathrop GM,Peterson LB

    更新日期:1993-08-01 00:00:00

  • Lung cancer susceptibility locus at 5p15.33.

    abstract::We carried out a genome-wide association study of lung cancer (3,259 cases and 4,159 controls), followed by replication in 2,899 cases and 5,573 controls. Two uncorrelated disease markers at 5p15.33, rs402710 and rs2736100 were detected by the genome-wide data (P = 2 x 10(-7) and P = 4 x 10(-6)) and replicated by the ...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/ng.254

    authors: McKay JD,Hung RJ,Gaborieau V,Boffetta P,Chabrier A,Byrnes G,Zaridze D,Mukeria A,Szeszenia-Dabrowska N,Lissowska J,Rudnai P,Fabianova E,Mates D,Bencko V,Foretova L,Janout V,McLaughlin J,Shepherd F,Montpetit A,Narod S

    更新日期:2008-12-01 00:00:00

  • Pyruvate kinase deficiency in mice protects against malaria.

    abstract::The global health impact of malaria is enormous, with an estimated 300-500 million clinical cases and 1 million annual deaths. In humans, initial susceptibility to infection with Plasmodium species, disease severity and ultimate outcome of malaria (self-healing or lethal) are under complex genetic control. Alleles ass...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/ng1260

    authors: Min-Oo G,Fortin A,Tam MF,Nantel A,Stevenson MM,Gros P

    更新日期:2003-12-01 00:00:00

  • Mutations in IRF6 cause Van der Woude and popliteal pterygium syndromes.

    abstract::Interferon regulatory factor 6 (IRF6) belongs to a family of nine transcription factors that share a highly conserved helix-turn-helix DNA-binding domain and a less conserved protein-binding domain. Most IRFs regulate the expression of interferon-alpha and -beta after viral infection, but the function of IRF6 is unkno...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/ng985

    authors: Kondo S,Schutte BC,Richardson RJ,Bjork BC,Knight AS,Watanabe Y,Howard E,de Lima RL,Daack-Hirsch S,Sander A,McDonald-McGinn DM,Zackai EH,Lammer EJ,Aylsworth AS,Ardinger HH,Lidral AC,Pober BR,Moreno L,Arcos-Burgos M,V

    更新日期:2002-10-01 00:00:00

  • Increased LIS1 expression affects human and mouse brain development.

    abstract::Deletions of the PAFAH1B1 gene (encoding LIS1) in 17p13.3 result in isolated lissencephaly sequence, and extended deletions including the YWHAE gene (encoding 14-3-3epsilon) cause Miller-Dieker syndrome. We identified seven unrelated individuals with submicroscopic duplication in 17p13.3 involving the PAFAH1B1 and/or ...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/ng.302

    authors: Bi W,Sapir T,Shchelochkov OA,Zhang F,Withers MA,Hunter JV,Levy T,Shinder V,Peiffer DA,Gunderson KL,Nezarati MM,Shotts VA,Amato SS,Savage SK,Harris DJ,Day-Salvatore DL,Horner M,Lu XY,Sahoo T,Yanagawa Y,Beaudet AL,

    更新日期:2009-02-01 00:00:00

  • Specific interaction between genotype, smoking and autoimmunity to citrullinated alpha-enolase in the etiology of rheumatoid arthritis.

    abstract::Gene-environment associations are important in rheumatoid arthritis (RA) susceptibility, with an association existing between smoking, HLA- DRB1 'shared epitope' alleles, PTPN22 and antibodies to cyclic citrullinated peptides (CCP). Here, we test the hypothesis that a subset of the anti-CCP response, with specific aut...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/ng.480

    authors: Mahdi H,Fisher BA,Källberg H,Plant D,Malmström V,Rönnelid J,Charles P,Ding B,Alfredsson L,Padyukov L,Symmons DP,Venables PJ,Klareskog L,Lundberg K

    更新日期:2009-12-01 00:00:00

  • GRIN2A mutations in acquired epileptic aphasia and related childhood focal epilepsies and encephalopathies with speech and language dysfunction.

    abstract::Epileptic encephalopathies are severe brain disorders with the epileptic component contributing to the worsening of cognitive and behavioral manifestations. Acquired epileptic aphasia (Landau-Kleffner syndrome, LKS) and continuous spike and waves during slow-wave sleep syndrome (CSWSS) represent rare and closely relat...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/ng.2726

    authors: Lesca G,Rudolf G,Bruneau N,Lozovaya N,Labalme A,Boutry-Kryza N,Salmi M,Tsintsadze T,Addis L,Motte J,Wright S,Tsintsadze V,Michel A,Doummar D,Lascelles K,Strug L,Waters P,de Bellescize J,Vrielynck P,de Saint Martin A

    更新日期:2013-09-01 00:00:00

  • Emergence of scarlet fever Streptococcus pyogenes emm12 clones in Hong Kong is associated with toxin acquisition and multidrug resistance.

    abstract::A scarlet fever outbreak began in mainland China and Hong Kong in 2011 (refs. 1-6). Macrolide- and tetracycline-resistant Streptococcus pyogenes emm12 isolates represent the majority of clinical cases. Recently, we identified two mobile genetic elements that were closely associated with emm12 outbreak isolates: the in...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/ng.3147

    authors: Davies MR,Holden MT,Coupland P,Chen JH,Venturini C,Barnett TC,Zakour NL,Tse H,Dougan G,Yuen KY,Walker MJ

    更新日期:2015-01-01 00:00:00

  • Genetic variation in the prostate stem cell antigen gene PSCA confers susceptibility to urinary bladder cancer.

    abstract::We conducted a genome-wide association study on 969 bladder cancer cases and 957 controls from Texas. For fast-track validation, we evaluated 60 SNPs in three additional US populations and validated the top SNP in nine European populations. A missense variant (rs2294008) in the PSCA gene showed consistent association ...

    journal_title:Nature genetics

    pub_type: 信件

    doi:10.1038/ng.421

    authors: Wu X,Ye Y,Kiemeney LA,Sulem P,Rafnar T,Matullo G,Seminara D,Yoshida T,Saeki N,Andrew AS,Dinney CP,Czerniak B,Zhang ZF,Kiltie AE,Bishop DT,Vineis P,Porru S,Buntinx F,Kellen E,Zeegers MP,Kumar R,Rudnai P,Gurzau

    更新日期:2009-09-01 00:00:00

  • An inducible long noncoding RNA amplifies DNA damage signaling.

    abstract::Long noncoding RNAs (lncRNAs) are prevalent genes with frequently precise regulation but mostly unknown functions. Here we demonstrate that lncRNAs guide the organismal DNA damage response. DNA damage activated transcription of the DINO (Damage Induced Noncoding) lncRNA via p53. DINO was required for p53-dependent gen...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/ng.3673

    authors: Schmitt AM,Garcia JT,Hung T,Flynn RA,Shen Y,Qu K,Payumo AY,Peres-da-Silva A,Broz DK,Baum R,Guo S,Chen JK,Attardi LD,Chang HY

    更新日期:2016-11-01 00:00:00

  • Reconstitution of human telomerase with the template RNA component hTR and the catalytic protein subunit hTRT.

    abstract::The maintenance of chromosome termini, or telomeres, requires the action of the enzyme telomerase, as conventional DNA polymerases cannot fully replicate the ends of linear molecules. Telomerase is expressed and telomere length is maintained in human germ cells and the great majority of primary human tumours. However,...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/ng1297-498

    authors: Weinrich SL,Pruzan R,Ma L,Ouellette M,Tesmer VM,Holt SE,Bodnar AG,Lichtsteiner S,Kim NW,Trager JB,Taylor RD,Carlos R,Andrews WH,Wright WE,Shay JW,Harley CB,Morin GB

    更新日期:1997-12-01 00:00:00

  • The genome of the platyfish, Xiphophorus maculatus, provides insights into evolutionary adaptation and several complex traits.

    abstract::Several attributes intuitively considered to be typical mammalian features, such as complex behavior, live birth and malignant disease such as cancer, also appeared several times independently in lower vertebrates. The genetic mechanisms underlying the evolution of these elaborate traits are poorly understood. The pla...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/ng.2604

    authors: Schartl M,Walter RB,Shen Y,Garcia T,Catchen J,Amores A,Braasch I,Chalopin D,Volff JN,Lesch KP,Bisazza A,Minx P,Hillier L,Wilson RK,Fuerstenberg S,Boore J,Searle S,Postlethwait JH,Warren WC

    更新日期:2013-05-01 00:00:00

  • Large-scale association analysis identifies 13 new susceptibility loci for coronary artery disease.

    abstract::We performed a meta-analysis of 14 genome-wide association studies of coronary artery disease (CAD) comprising 22,233 individuals with CAD (cases) and 64,762 controls of European descent followed by genotyping of top association signals in 56,682 additional individuals. This analysis identified 13 loci newly associate...

    journal_title:Nature genetics

    pub_type: 杂志文章,meta分析

    doi:10.1038/ng.784

    authors: Schunkert H,König IR,Kathiresan S,Reilly MP,Assimes TL,Holm H,Preuss M,Stewart AF,Barbalic M,Gieger C,Absher D,Aherrahrou Z,Allayee H,Altshuler D,Anand SS,Andersen K,Anderson JL,Ardissino D,Ball SG,Balmforth AJ,Ba

    更新日期:2011-03-06 00:00:00

  • Complementation cloning identifies CDG-IIc, a new type of congenital disorders of glycosylation, as a GDP-fucose transporter deficiency.

    abstract::Congenital disorders of glycosylation (CDG) comprise a rapidly growing group of inherited disorders in which glycosylation of glycoproteins is defective due to mutations in genes required for the assembly of lipid-linked oligosaccharides, their transfer to nascent glycoproteins (CDG-I) or the processing of protein-bou...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/ng0501-73

    authors: Lübke T,Marquardt T,Etzioni A,Hartmann E,von Figura K,Körner C

    更新日期:2001-05-01 00:00:00

  • Establishment of functional imprinting of the H19 gene in human developing placentae.

    abstract::We have found that the imprinted H19 gene can be expressed either biallelically or monoallelically in the developing human placentae. H19 biallelic expression is confined to the placenta until 10 weeks of gestation, after which it becomes exclusively maternal, and does not affect allele-specificity or levels of IGF2 e...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/ng0795-318

    authors: Jinno Y,Ikeda Y,Yun K,Maw M,Masuzaki H,Fukuda H,Inuzuka K,Fujishita A,Ohtani Y,Okimoto T

    更新日期:1995-07-01 00:00:00

  • Mutation of DNASE1 in people with systemic lupus erythematosus.

    abstract::Systemic lupus erythematosus (SLE) is a highly prevalent human autoimmune diseases that causes progressive glomerulonephritis, arthritis and an erythematoid rash. Mice deficient in deoxyribonuclease I (Dnase1) develop an SLE-like syndrome. Here we describe two patients with a heterozygous nonsense mutation in exon 2 o...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/91070

    authors: Yasutomo K,Horiuchi T,Kagami S,Tsukamoto H,Hashimura C,Urushihara M,Kuroda Y

    更新日期:2001-08-01 00:00:00

  • Candidate lung tumor susceptibility genes identified through whole-genome association analyses in inbred mice.

    abstract::We performed a whole-genome association analysis of lung tumor susceptibility using dense SNP maps ( approximately 1 SNP per 20 kb) in inbred mice. We reproduced the pulmonary adenoma susceptibility 1 (Pas1) locus identified in previous linkage studies and further narrowed this quantitative trait locus (QTL) to a regi...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/ng1849

    authors: Liu P,Wang Y,Vikis H,Maciag A,Wang D,Lu Y,Liu Y,You M

    更新日期:2006-08-01 00:00:00

  • Genetic variants at 6p21.33 are associated with susceptibility to follicular lymphoma.

    abstract::We conducted genome-wide association studies of non-Hodgkin lymphoma using Illumina HumanHap550 BeadChips to identify subtype-specific associations in follicular, diffuse large B-cell and chronic lymphocytic leukemia/small lymphocytic lymphomas. We found that rs6457327 on 6p21.33 was associated with susceptibility to ...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/ng.419

    authors: Skibola CF,Bracci PM,Halperin E,Conde L,Craig DW,Agana L,Iyadurai K,Becker N,Brooks-Wilson A,Curry JD,Spinelli JJ,Holly EA,Riby J,Zhang L,Nieters A,Smith MT,Brown KM

    更新日期:2009-08-01 00:00:00

  • Minisatellite diversity supports a recent African origin for modern humans.

    abstract::In a study of human diversity at a highly variable locus, we have mapped the internal structures of tandem-repetitive alleles from different populations at the minisatellite MS205 (D16S309). The results give an unusually detailed view of the different allelic structures represented on modern human chromosomes, and of ...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/ng0696-154

    authors: Armour JA,Anttinen T,May CA,Vega EE,Sajantila A,Kidd JR,Kidd KK,Bertranpetit J,Pääbo S,Jeffreys AJ

    更新日期:1996-06-01 00:00:00

  • Multiple knockout analysis of genetic robustness in the yeast metabolic network.

    abstract::Genetic robustness characterizes the constancy of the phenotype in face of heritable perturbations. Previous investigations have used comprehensive single and double gene knockouts to study gene essentiality and pairwise gene interactions in the yeast Saccharomyces cerevisiae. Here we conduct an in silico multiple kno...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/ng1856

    authors: Deutscher D,Meilijson I,Kupiec M,Ruppin E

    更新日期:2006-09-01 00:00:00

  • Regional loss of imprinting and growth deficiency in mice with a targeted deletion of KvDMR1.

    abstract::Genomic imprinting is an epigenetic modification that results in expression from only one of the two parental copies of a gene. Differences in methylation between the two parental chromosomes are often observed at or near imprinted genes. Beckwith-Wiedemann syndrome (BWS), which predisposes to cancer and excessive gro...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/ng988

    authors: Fitzpatrick GV,Soloway PD,Higgins MJ

    更新日期:2002-11-01 00:00:00

  • Transferrin receptor is necessary for development of erythrocytes and the nervous system.

    abstract::Plasma iron circulates bound to transferrin (Trf), which solubilizes the ferric ion and attenuates its reactivity. Diferric Trf interacts with cell-surface Trf receptor (Trfr) to undergo receptor-mediated endocytosis into specialized endosomes. Endosomal acidification leads to iron release, and iron is transported out...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/7727

    authors: Levy JE,Jin O,Fujiwara Y,Kuo F,Andrews NC

    更新日期:1999-04-01 00:00:00

  • Loss of the Alox5 gene impairs leukemia stem cells and prevents chronic myeloid leukemia.

    abstract::Targeting of cancer stem cells is believed to be essential for curative therapy of cancers, but supporting evidence is limited. Few selective target genes in cancer stem cells have been identified. Here we identify the arachidonate 5-lipoxygenase (5-LO) gene (Alox5) as a critical regulator for leukemia stem cells (LSC...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/ng.389

    authors: Chen Y,Hu Y,Zhang H,Peng C,Li S

    更新日期:2009-07-01 00:00:00

  • Embryonic retinoic acid synthesis is essential for early mouse post-implantation development.

    abstract::A number of studies have suggested that the active derivative of vitamin A, retinoic acid (RA), may be important for early development of mammalian embryos. Severe vitamin A deprivation in rodents results in maternal infertility, precluding a thorough investigation of the role of RA during embryogenesis. Here we show ...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/7788

    authors: Niederreither K,Subbarayan V,Dollé P,Chambon P

    更新日期:1999-04-01 00:00:00

  • Amino-terminal phosphorylation of c-Jun regulates stress-induced apoptosis and cellular proliferation.

    abstract::c-Jun is a major component of the heterodimeric transcription factor AP-1 and is essential for embryonic development, as fetuses lacking Jun die at mid-gestation with impaired hepatogenesis and primary Jun-/- fibroblasts have a severe proliferation defect and undergo premature senescence in vitro. c-Jun and AP-1 activ...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/6854

    authors: Behrens A,Sibilia M,Wagner EF

    更新日期:1999-03-01 00:00:00

  • Expression pattern of the Kallmann syndrome gene in the olfactory system suggests a role in neuronal targeting.

    abstract::Kallmann syndrome is a genetic disorder characterized by a defect in olfactory system development, which appears to be due to an abnormality in the migration of olfactory axons and gonadotropin releasing hormone (Gn-RH) producing neurons. The X-linked Kallmann syndrome gene shares significant similarities with molecul...

    journal_title:Nature genetics

    pub_type: 杂志文章

    doi:10.1038/ng0593-19

    authors: Rugarli EI,Lutz B,Kuratani SC,Wawersik S,Borsani G,Ballabio A,Eichele G

    更新日期:1993-05-01 00:00:00