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Genome-wide association identifies several QTLs controlling cysteine and methionine content in soybean seed including some promising candidate genes.

Abstract：

:Soybean is an important source of protein, oil and carbohydrates, as well as other beneficial nutrients. A major function of proteins in nutrition is to supply adequate amounts of amino acids. Although they are essential for human nutrition, the sulfur-containing amino acids cysteine (Cys) and methionine (Met) are often limited and the genetic control of their content in soybean seeds is poorly characterized. This study aimed to characterize the phenotypic variation and identify quantitative trait loci (QTL) associated with Cys and Met content in a core set of 137 soybean lines, representative of the genetic diversity among Canadian short-season soybean, spanning maturity groups 000-II (MG000-II). Significant phenotypic differences were found among these lines for Cys, Met and Cys + Met content. Using both a mixed linear model and six multi-locus methods with a catalogue of 2.18 M SNPs, we report a total of nine QTLs and seventeen QTNs of which seven comprise promising candidate genes. This work allowed us to reproducibly detect multiple novel loci associated with sulfur-containing amino acid content. The markers and genes identified in this study may be useful for soybean genetic improvement aiming to increase Cys and Met content.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Malle S,Eskandari M,Morrison M,Belzile F

doi

10.1038/s41598-020-78907-w

subject

Has Abstract

pub_date

2020-12-11 00:00:00

pages

21812

issue

1

issn

2045-2322

pii

10.1038/s41598-020-78907-w

journal_volume

10

pub_type

杂志文章

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