Optimization of T4 phage engineering via CRISPR/Cas9.

Abstract:

:A major limitation hindering the widespread use of synthetic phages in medical and industrial settings is the lack of an efficient phage-engineering platform. Classical T4 phage engineering and several newly proposed methods are often inefficient and time consuming and consequently, only able to produce an inconsistent range of genomic editing rates between 0.03-3%. Here, we review and present new understandings of the CRISPR/Cas9 assisted genome engineering technique that significantly improves the genomic editing rate of T4 phages. Our results indicate that crRNAs selection is a major rate limiting factor in T4 phage engineering via CRISPR/Cas9. We were able to achieve an editing rate of > 99% for multiple genes that functionalizes the phages for further applications. We envision that this improved phage-engineering platform will accelerate the fields of individualized phage therapy, biocontrol, and rapid diagnostics.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Duong MM,Carmody CM,Ma Q,Peters JE,Nugen SR

doi

10.1038/s41598-020-75426-6

subject

Has Abstract

pub_date

2020-10-26 00:00:00

pages

18229

issue

1

issn

2045-2322

pii

10.1038/s41598-020-75426-6

journal_volume

10

pub_type

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