Comparing local ancestry inference models in populations of two- and three-way admixture.

abstract：:Barnacles and their allies (Thecostraca) are a biologically diverse, monophyletic crustacean group, which includes both intensely studied taxa, such as the acorn and stalked barnacles, as well as cryptic taxa, for example, Facetotecta. Recent efforts have clarified phylogenetic relationships in many different parts of...

journal_title：PeerJ

authors： Ewers-Saucedo C,Owen CL,Pérez-Losada M,Høeg JT,Glenner H,Chan BKK,Crandall KA

更新日期：2019-08-16 00:00:00

abstract：Background:Herpesviral hematopoietic necrosis disease, caused by cyprinid herpesvirus-2 (CyHV-2), is responsible for massive mortalities in the aquaculture of goldfish, Carassius auratus. Permissive cell lines for the isolation and propagation of CyHV-2 have been established from various goldfish tissues by sacrificing...

journal_title：PeerJ

authors： Dharmaratnam A,Kumar R,Valaparambil BS,Sood N,Pradhan PK,Das S,Swaminathan TR

更新日期：2020-07-14 00:00:00

abstract：BACKGROUND:The NDUFS4 gene encodes an 18-kD subunit of mitochondria complex I, and mutations in this gene lead to the development of a severe neurodegenerative disease called Leigh syndrome (LS) in humans. To investigate the disease phenotypes and molecular mechanisms of Leigh syndrome, the Ndufs4 knockout (KO) mouse h...

journal_title：PeerJ

authors： Wang M,Huang YP,Wu H,Song K,Wan C,Chi AN,Xiao YM,Zhao XY

更新日期：2017-05-18 00:00:00

abstract：:The Pomacentridae (damselfish) and Apogonidae (cardinalfish) are among the most common fish families on coral reefs and in the aquarium trade. Members of both families undergo a pelagic larvae phase prior to settlement on the reef, where adults play key roles in benthic habitat structuring and trophic interactions. Fi...

journal_title：PeerJ

authors： Parris DJ,Brooker RM,Morgan MA,Dixson DL,Stewart FJ

更新日期：2016-08-31 00:00:00

abstract：:Sustained-release formulations of ivermectin (IVM) are useful for controlling parasitic diseases in animals. In this work, an IVM bolus made from microcrystalline cellulose (MCC), starch and low-substituted hydroxypropyl cellulose (LS-HPC) was optimized by response surface methodology. The bolus was dissolved in a cup...

journal_title：PeerJ

authors： Ruan X,Gao X,Gao Y,Peng L,Ji H,Guo D,Jiang S

更新日期：2018-07-31 00:00:00

abstract：:Many marine biology studies depend on field work on ships or remote sampling locations where sophisticated sample preservation techniques (e.g., high-pressure freezing) are often limited or unavailable. Our aim was to optimize the ultrastructural preservation of marine invertebrates, especially when working in the fie...

journal_title：PeerJ

authors： Montanaro J,Gruber D,Leisch N

更新日期：2016-03-31 00:00:00

abstract：:Protein aggregation into highly-structured amyloid fibrils is linked to several neurodegenerative diseases. Such fibril formation by superoxide dismutase I (SOD1) is considered to be related to amyotrophic lateral sclerosis, a late-onset and fatal disorder. Despite much effort and the discovery of numerous anti-amyloi...

journal_title：PeerJ

authors： Musteikyte G,Ziaunys M,Smirnovas V

更新日期：2020-08-14 00:00:00

abstract：:To understand the mechanism of photosynthetic inhibition and generation of reactive oxygen species (ROS) in Symbiodinium types under stress, chemicals such as dichlorophenyl dimethylurea (DCMU) are widely used. Moreover, DCMU and recently menthol were used to generate aposymbiotic cnidarian hosts. While the effects of...

journal_title：PeerJ

authors： Wang JT,Keshavmurthy S,Chu TY,Chen CA

更新日期：2017-10-02 00:00:00

abstract：:Root hairs are unicellular elongations of certain rhizodermal cells that improve the uptake of sparingly soluble and immobile soil nutrients. Among different Arabidopsis thaliana genotypes, root hair density, length and the local acclimation to low inorganic phosphate (Pi) differs considerably, when analyzed on split ...

journal_title：PeerJ

authors： Stetter MG,Benz M,Ludewig U

更新日期：2017-01-24 00:00:00

abstract：:The fates of genetic polymorphisms maintained by balancing selection depend on evolutionary dynamics at linked sites. While coevolution across linked, epigenetically-interacting loci has been extensively explored, such supergenes may be relatively rare. However, genes harboring adaptive variation can occur in close ph...

journal_title：PeerJ

authors： Tennessen JA

更新日期：2018-06-28 00:00:00

abstract：Background:Dengue is a major and rapidly increasing public health problem. In Argentina, the southern extreme of its distribution in the Americas, epidemic transmission takes place during the warm season. Since its re-emergence in 1998 two major outbreaks have occurred, the biggest during 2016. To identify the environm...

journal_title：PeerJ

authors： Carbajo AE,Cardo MV,Guimarey PC,Lizuain AA,Buyayisqui MP,Varela T,Utgés ME,Giovacchini CM,Santini MS

更新日期：2018-07-17 00:00:00

abstract：:The recent increased integration of evolutionary theory into conservation programs has greatly improved our ability to protect endangered species. A common application of such theory links population dynamics and indices of genetic diversity, usually estimated from neutrally evolving markers. However, some studies hav...

journal_title：PeerJ

authors： Baltazar-Soares M,Bracamonte SE,Bayer T,Chain FJ,Hanel R,Harrod C,Eizaguirre C

更新日期：2016-04-11 00:00:00

abstract：:Divergences between agricultural management can result in different types of biological interactions between plants and microorganisms, which may affect food quality and productivity. Conventional practices are well-established in the agroindustry as very efficient and lucrative; however, the increasing demand for sus...

journal_title：PeerJ

authors： Carvalho CR,Dias AC,Homma SK,Cardoso EJ

更新日期：2020-06-02 00:00:00

abstract：:Background. Physical, visual, chemical, and auditory cues signalling fighting ability have independently evolved in many animal taxa as a means to resolve conflicts without escalating to physical aggression. Facial width-to-height ratio (fWHR, i.e., the relative width to height of the face) has been associated with do...

journal_title：PeerJ

authors： Borgi M,Majolo B

更新日期：2016-03-21 00:00:00

abstract：:Rhizoctonia solani AG1 IA is a soil-borne fungal phytopathogen that can significantly harm crops resulting in economic loss. This species overwinters in grass roots and diseased plants, and produces sclerotia that infect future crops. R. solani AG1 IA does not produce spores; therefore, understanding the molecular mec...

journal_title：PeerJ

authors： Liu B,Wang H,Ma Z,Gai X,Sun Y,He S,Liu X,Wang Y,Xuan Y,Gao Z

更新日期：2018-06-18 00:00:00

abstract：:Advances in sequencing techniques have led to exponential growth in biological data, demanding the development of large-scale bioinformatics experiments. Because these experiments are computation- and data-intensive, they require high-performance computing techniques and can benefit from specialized technologies such ...

journal_title：PeerJ

authors： Mondelli ML,Magalhães T,Loss G,Wilde M,Foster I,Mattoso M,Katz D,Barbosa H,de Vasconcelos ATR,Ocaña K,Gadelha LMR Jr

更新日期：2018-08-29 00:00:00

abstract：Background and Aims:The link between gut microbiota and type 2 diabetes (T2D) has been addressed by numerous studies. Streptococcus thermophilus from fermented milk products, has been used as a probiotic in previous research. However, whether heat-killed S. thermophilus can improve the glycemic parameters of diabetic r...

journal_title：PeerJ

authors： Gao X,Wang F,Zhao P,Zhang R,Zeng Q

更新日期：2019-06-13 00:00:00

abstract：Background:The mangrove crab Ucides cordatus is considered a key species for the ecological balance of mangrove forests and a major source of employment and income for traditional crab collectors in Brazil. Several studies evidenced weak genetic variation among populations due to an efficient larval transport. However,...

journal_title：PeerJ

authors： Britto FB,Schmidt AJ,Carvalho AMF,Vasconcelos CCMP,Farias AM,Bentzen P,Diniz FM

更新日期：2018-04-30 00:00:00

abstract：:In the Mississippi River Basin of North America, invasive bigheaded carp (silver carp Hypophthalmichthys molitrix and bighead carp H. nobilis, also referred to as Asian carp) have spread rapidly over the past several decades. In the Illinois River, an important tributary of the Upper Mississippi River, reproduction ap...

journal_title：PeerJ

authors： Gibson-Reinemer DK,Solomon LE,Pendleton RM,Chick JH,Casper AF

更新日期：2017-09-14 00:00:00

abstract：:The ichthyoplankton assemblage structure in the Yangtze Estuary was analyzed based on four springs in 1999, 2001, 2004 and 2007 in order to provide detailed characterizations of the ichthyoplankton assemblage in springs, examine the long-term dynamics of spring ichthyoplankton assemblages, and evaluate the influence o...

journal_title：PeerJ

authors： Zhang H,Xian W,Liu S

更新日期：2015-08-18 00:00:00

abstract：BACKGROUND:The primary objective of this cross-sectional study was to estimate the crude, seasonal and cull-reason stratified prevalence of Salmonella fecal shedding in cull dairy cattle on seven California dairies. A secondary objective was to estimate and compare the relative sensitivity (Se) and specificity (Sp) for...

journal_title：PeerJ

authors： Abu Aboud OA,Adaska JM,Williams DR,Rossitto PV,Champagne JD,Lehenbauer TW,Atwill R,Li X,Aly SS

更新日期：2016-08-30 00:00:00

abstract：Background:Geographic variation in body size and condition can reveal differential local adaptation to resource availability or climatic factors. Body size and condition are related to fitness in garter snakes (Thamnophis), thus good body condition may increase survival, fecundity in females, and mating success in male...

journal_title：PeerJ

authors： Valencia-Flores E,Venegas-Barrera CS,Fajardo V,Manjarrez J

更新日期：2019-03-13 00:00:00

abstract：:Majority legumes in the temperate and arctic zones have water-impermeable seeds (physical dormancy, PY). However, various authors have reported that seeds of some Caragana species are water-permeable and thus non-dormant. We (1) tested seeds of 15 species of Caragana matured in the same site in 2014, 2016 and/or 2017 ...

journal_title：PeerJ

authors： Chen D,Zhang R,Baskin CC,Hu X

更新日期：2019-05-09 00:00:00

abstract：:Unworn teeth of herbivorous mammals are not immediately functional. They have to be partially worn to expose enamel ridges which can then act as shear-cutting blades to break the food down. We use the Plains Zebra (Equus quagga) as a hypsodont, herbivorous model organism to investigate how initial wear of the tooth cr...

journal_title：PeerJ

authors： Winkler DE,Kaiser TM

更新日期：2015-06-11 00:00:00

abstract：Background:Due to intensive sluice construction and other human disturbances, lakeshore vegetation has been destroyed and ecosystems greatly changed. Rhizospheric microbiota constitute a key part of a functioning rhizosphere ecosystem. Maintaining rhizosphere microbial diversity is a central, critical issue for sustain...

journal_title：PeerJ

authors： Zhang X,Wang H,Li Z,Xie J,Ni J

更新日期：2020-09-29 00:00:00

abstract：Background:The objective of the present study was to compare the effects of equal-volume resistance training (RT) performed with different training frequencies on muscle size and strength in trained young men. Methods:Sixteen men with at least one year of RT experience were divided into two groups, G1 and G2, that tra...

journal_title：PeerJ

authors： Gentil P,Fisher J,Steele J,Campos MH,Silva MH,Paoli A,Giessing J,Bottaro M

更新日期：2018-06-22 00:00:00

abstract：Background:Methylenetetrahydrofolate reductase (MTHFR) is indispensable for the conversion of homocysteine (Hcy) to methionine. The single nucleotide polymorphism (SNP) of MTHFR gene (rs1801133, C667T) is correlated with decreased enzyme activity that eventually results in elevated plasma Hcy levels. Hyperhomocysteinem...

journal_title：PeerJ

authors： Yuan H,Fu M,Yang X,Huang K,Ren X

更新日期：2020-02-20 00:00:00

abstract：:Molt summary tables reveal the sequence and mode of flight-feather replacement and how these feathers are divided into independent replacement series. Tables for summarizing molt are relatively new, and the rules for generating them were first formally illustrated using data from a temperate passerine. However, this f...

journal_title：PeerJ

authors： Rohwer S,Rohwer VG

更新日期：2018-09-07 00:00:00

abstract：Background and Purpose:Oxidative stress is involved in normal and pathological functioning of skeletal muscle. Protection of myoblasts from oxidative stress may improve muscle contraction and delay aging. Here we studied the effect of R. coriaria sumac fruit extract on human myoblasts and zebrafish embryos in condition...

journal_title：PeerJ

authors： Najjar F,Rizk F,Carnac G,Nassar R,Jabak S,Sobolev AP,Bou Saada Y,El Sabban M,Hamade A

更新日期：2017-12-12 00:00:00

abstract：:Rhodioloside, the main effective constituent of Rhodiola rosea, demonstrates antiaging and antioxidative stress functions and inhibits calcium overloading in cells. These functions imply that rhodioloside may exert protective effects on hippocampal neurons after total cerebral ischemia/reperfusion injury. In this stud...

journal_title：PeerJ

authors： Zhang Y,Guo X,Wang G,Liu J,Liang P,Wang H,Zhu C,Wu Q

更新日期：2020-11-09 00:00:00