From canonical to modified nucleotides: balancing translation and metabolism.

abstract：:Torsin ATPases (Torsins) belong to the widespread AAA+ (ATPases associated with a variety of cellular activities) family of ATPases, which share structural similarity but have diverse cellular functions. Torsins are outliers in this family because they lack many characteristics of typical AAA+ proteins, and they are t...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Rose AE,Brown RS,Schlieker C

更新日期：2015-01-01 00:00:00

abstract：:The plasma coagulation system in mammalian blood consists of a cascade of enzyme activation events in which serine proteases activate the proteins (proenzymes and procofactors) in the next step of the cascade via limited proteolysis. The ultimate outcome is the polymerization of fibrin and the activation of platelets,...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Smith SA,Travers RJ,Morrissey JH

更新日期：2015-01-01 00:00:00

abstract：:Telomere DNA-binding proteins protect the ends of chromosomes in eukaryotes. A subset of these proteins are constructed with one or more OB folds and bind with G+T-rich single-stranded DNA found at the extreme termini. The resulting DNA-OB protein complex interacts with other telomere components to coordinate critical...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Horvath MP

更新日期：2011-10-01 00:00:00

abstract：:The nicotinic acetylcholine receptor (nAcChR) is a ligand-gated ion channel found in the postsynaptic membranes of electric organs, at the neuromuscular junction, and at nicotinic cholinergic synapses of the mammalian central and peripheral nervous system. The nAcChR from Torpedo electric organ and mammalian muscle is...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Huganir RL,Miles K

更新日期：1989-01-01 00:00:00

abstract：:Following a brief introduction of cellular response to stimulation comprising leukocyte activation, three major areas are discussed: (1) the neutrophil oxidase; (2) myeloperoxidase (MPO)-dependent oxidative microbicidal reactions; and (3) MPO-independent oxidative reactions. Topics included in section (A) are current ...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Hurst JK,Barrette WC Jr

更新日期：1989-01-01 00:00:00

abstract：:DNA double-strand breaks are highly toxic DNA lesions that cause genomic instability, if not efficiently repaired. RecQ helicases are a family of highly conserved proteins that maintain genomic stability through their important roles in several DNA repair pathways, including DNA double-strand break repair. Double-stra...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Keijzers G,Maynard S,Shamanna RA,Rasmussen LJ,Croteau DL,Bohr VA

更新日期：2014-11-01 00:00:00

abstract：:This article is an overview of current research in the area of sulfate activation. Emphasis is placed on presenting unresolved issues in an appropriate context for critical evaluation by the reader. The energetics of sulfate activation is reevaluated in light of recent findings that demonstrate that the synthesis of a...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Leyh TS

更新日期：1993-01-01 00:00:00

abstract：:Clathrin constitutes the coat of vesicles involved in three receptor-mediated intracellular transport pathways; the export of aggregated material from the trans-Golgi network for regulated secretion, the transfer of lysosomal hydrolases from the trans-Golgi network to lysosomes and receptor-mediated endocytosis at the...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Pley U,Parham P

更新日期：1993-01-01 00:00:00

abstract：:The major intrinsic protein (MIP) of the bovine lens fiber cell membrane was the first member of the MIP family of proteins to be sequenced and characterized. It is probably a homotetramer with transmembrane channel activity that plays a role in lens biogenesis or maintenance. The polypeptide chain of each subunit may...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Reizer J,Reizer A,Saier MH Jr

更新日期：1993-01-01 00:00:00

abstract：:Translational control mechanisms are, besides transcriptional control and mRNA stability, the most determining for final protein levels. A large number of accessory factors that assist the ribosome during initiation, elongation, and termination of translation are required for protein synthesis. Cap-dependent translati...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Van Der Kelen K,Beyaert R,Inzé D,De Veylder L

更新日期：2009-07-01 00:00:00

abstract：:O-linked β-N-acetylglucosamine (O-GlcNAc) is a regulatory post-translational modification of intracellular proteins. The dynamic and inducible cycling of the modification is governed by O-GlcNAc transferase (OGT) and O-GlcNAcase (OGA) in response to UDP-GlcNAc levels in the hexosamine biosynthetic pathway (HBP). Due t...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Vaidyanathan K,Durning S,Wells L

更新日期：2014-03-01 00:00:00

abstract：:The reorganization of metabolic pathways in cancer facilitates the flux of carbon and reducing equivalents into anabolic pathways at the expense of oxidative phosphorylation. This provides rapidly dividing cells with the necessary precursors for membrane, protein and nucleic acid synthesis. A fundamental metabolic per...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Ridgway ND

更新日期：2013-01-01 00:00:00

abstract：:The demonstration that ribosomal peptide synthesis is a ribozyme-catalyzed reaction makes it almost certain that there was once an RNA World. The central problem for origin-of-life studies, therefore, is to understand how a protein-free RNA World became established on the primitive Earth. We first review the literatur...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Orgel LE

更新日期：2004-03-01 00:00:00

abstract：:The eukaryotic MCM2-7 complex is recruited onto origins of replication during the G1 phase of the cell cycle and acts as the main helicase at the replication fork during the S phase. Over the last few years a number of structural reports on MCM proteins using both electron microscopy and protein crystallography have b...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Costa A,Onesti S

更新日期：2009-09-01 00:00:00

abstract：:Low-copy nuclear genes in plants are a rich source of phylogenetic information. They hold a great potential to improve the robustness of phylogenetic reconstruction at all taxonomic levels, especially where universal markers such as cpDNA and nrDNA are unable to generate strong phylogenetic hypotheses. Low-copy nuclea...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Sang T

更新日期：2002-01-01 00:00:00

abstract：:Studies with biomimetic models can yield considerable insight into mechanisms of enzymatic catalysis. The discussion above indicates how such information has been important in the cases of flavoproteins, hemoproteins, and, to a lesser extent, the copper protein dopamine beta-hydroxylase. Some of the moieties that we g...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Guengerich FP

更新日期：1990-01-01 00:00:00

abstract：:This review focuses on how microbes live on CO as a sole source of carbon and energy and with CO by generating carbon monoxide as a metabolic intermediate. The use of CO is a property of organisms that use the Wood-L jungdahl pathway of autotrophic growth. The review discusses when CO metabolism originated, when and h...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Ragsdale SW

更新日期：2004-05-01 00:00:00

abstract：:As we learn more about the biology of the Toll-like receptors (TLRs), a wide range of molecules that can activate this fascinating family of pattern recognition receptors emerges. In addition to conserved pathogenic components, endogenous danger signals created upon tissue damage are also sensed by TLRs. Detection of ...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Bryant CE,Gay NJ,Heymans S,Sacre S,Schaefer L,Midwood KS

更新日期：2015-01-01 00:00:00

abstract：:HEPN (Higher Eukaryotes and Prokaryotes Nucleotide-binding) RNases are an emerging class of functionally diverse RNA processing and degradation enzymes. Members are defined by a small α-helical bundle encompassing a short consensus RNase motif. HEPN dimerization is a universal requirement for RNase activation as the c...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Pillon MC,Gordon J,Frazier MN,Stanley RE

更新日期：2021-02-01 00:00:00

abstract：:Eukaryogenesis, the origin of the eukaryotic cell, represents one of the fundamental evolutionary transitions in the history of life on earth. This event, which is estimated to have occurred over one billion years ago, remains rather poorly understood. While some well-validated examples of fossil microbial eukaryotes ...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Koumandou VL,Wickstead B,Ginger ML,van der Giezen M,Dacks JB,Field MC

更新日期：2013-07-01 00:00:00

abstract：:Type 1 protein phosphatases (PP-1) comprise a group of widely distributed enzymes that specifically dephosphorylate serine and threonine residues of certain phosphoproteins. They all contain an isoform of the same catalytic subunit, which has an extremely conserved primary structure. One of the properties of PP-1 that...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Bollen M,Stalmans W

更新日期：1992-01-01 00:00:00

abstract：:DNA damaging agents have been a cornerstone of cancer therapy for nearly a century. The discovery of many of these chemicals, particularly the alkylating agents, are deeply entwined with the development of poisonous materials originally intended for use in warfare. Over the last decades, their anti-proliferative effec...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Tsao N,Schärer OD,Mosammaparast N

更新日期：2021-01-12 00:00:00

abstract：:Our understanding of the fundamental regulatory roles that tyrosine phosphatases play within cells has advanced significantly in the last two decades. Out-dated ideas that tyrosine phosphatases acts solely as the "off" switch counterbalancing the action of tyrosine kinases has proved to be flawed. PTP1B is the most ch...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Feldhammer M,Uetani N,Miranda-Saavedra D,Tremblay ML

更新日期：2013-09-01 00:00:00

abstract：:The purpose of this review is to provide an analysis of the latest developments on the functions of the carbon catabolite-repression 4-Not (Ccr4-Not) complex in regulating eukaryotic gene expression. Ccr4-Not is a nine-subunit protein complex that is conserved in sequence and function throughout the eukaryotic kingdom...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Miller JE,Reese JC

更新日期：2012-07-01 00:00:00

abstract：:Glycosaminoglycans (GAGs) play an intricate role in the extracellular matrix (ECM), not only as soluble components and polyelectrolytes, but also by specific interactions with growth factors and other transient components of the ECM. Modifications of GAG chains, such as isomerization, sulfation, and acetylation, gener...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Ernst S,Langer R,Cooney CL,Sasisekharan R

更新日期：1995-01-01 00:00:00

abstract：:Ribonucleases (RNases) are mediators in most reactions of RNA metabolism. In recent years, there has been a surge of new information about RNases and the roles they play in cell physiology. In this review, a detailed description of bacterial RNases is presented, focusing primarily on those from Escherichia coli and Ba...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Bechhofer DH,Deutscher MP

更新日期：2019-06-01 00:00:00

abstract：:For more than a century amyloid was considered to be an interesting, unique, but inconsequential pathologic entity that rarely caused significant clinical problems. We now recognize that amyloid is not one entity. In vivo it is a uniform organization of a disease, or process, specific protein co-deposited with a set o...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Kisilevsky R,Fraser PE

更新日期：1997-01-01 00:00:00

abstract：:The spontaneous and unregulated polymerization of actin filaments is inhibited in cells by actin monomer-binding proteins such as profilin and Tbeta4. Eukaryotic cells and certain pathogens use filament nucleators to stabilize actin polymerization nuclei, whose formation is rate-limiting. Known filament nucleators inc...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Dominguez R

更新日期：2009-11-01 00:00:00

abstract：:We know of three routes that organisms have evolved to synthesize complex organic molecules from CO2: the Calvin cycle, the reverse tricarboxylic acid cycle, and the reductive acetyl-CoA pathway. This review describes the enzymatic steps involved in the acetyl-CoA pathway, also called the Wood pathway, which is the ma...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Ragsdale SW

更新日期：1991-01-01 00:00:00

abstract：:Transferrin is one of the sources of iron that is most readily available to colonizing and invading pathogens. In this review, we look at iron uptake by the bacterial transferrin receptor that is found in the families Neisseriaceae, Pasteurellaceae and Moraxellaceae. This bipartite receptor consists of the TonB-depend...

journal_title：Critical reviews in biochemistry and molecular biology

authors： Pogoutse AK,Moraes TF

更新日期：2017-06-01 00:00:00