Hidden resources in the Escherichia coli genome restore PLP synthesis and robust growth after deletion of the essential gene pdxB.

abstract：:Acetyl-CoA synthase from Clostridium thermoaceticum (ACS(Ct)) is an alpha(2)beta(2) tetramer containing two novel Ni-X-Fe(4)S(4) active sites (the A and C clusters) and a standard Fe(4)S(4) cluster (the B cluster). The acsA and acsB genes encoding the enzyme were cloned into Escherichia coli strain JM109 and overexpre...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Loke HK,Bennett GN,Lindahl PA

更新日期：2000-11-07 00:00:00

abstract：:Inferring causal effects from observational and interventional data is a highly desirable but ambitious goal. Many of the computational and statistical methods are plagued by fundamental identifiability issues, instability, and unreliable performance, especially for large-scale systems with many measured variables. We...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Meinshausen N,Hauser A,Mooij JM,Peters J,Versteeg P,Bühlmann P

更新日期：2016-07-05 00:00:00

abstract：:1-Aminocyclopropane-1-carboxylate (ACC) synthase (EC 4.4.1.14), extracted from tomato pericarp tissue, was purified 6500-fold by conventional and high-performance liquid chromatography. Two-dimensional gel electrophoresis of this preparation indicated that ACC synthase activity was associated with a protein band at 50...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Bleecker AB,Kenyon WH,Somerville SC,Kende H

更新日期：1986-10-01 00:00:00

abstract：:Food choices are shifting globally in ways that are negatively affecting both human health and the environment. Here we consider how consuming an additional serving per day of each of 15 foods is associated with 5 health outcomes in adults and 5 aspects of agriculturally driven environmental degradation. We find that ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Clark MA,Springmann M,Hill J,Tilman D

更新日期：2019-11-12 00:00:00

abstract：:The origins and consequences of a regulatory T cell (Treg) disorder in systemic lupus erythematosus (SLE) are poorly understood. In the (NZBxNZW) F(1) mouse model of lupus, we found that CD4(+)Foxp3(+) Treg failed to maintain a competitive pool size in the peripheral lymphoid organs resulting in a progressive homeosta...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Humrich JY,Morbach H,Undeutsch R,Enghard P,Rosenberger S,Weigert O,Kloke L,Heimann J,Gaber T,Brandenburg S,Scheffold A,Huehn J,Radbruch A,Burmester GR,Riemekasten G

更新日期：2010-01-05 00:00:00

abstract：:We have investigated the interaction of human cytomegalovirus (CMV) with cultured primary granulocyte-macrophage progenitors, a suspected natural site of viral latency, and have established conditions for latent infection and reactivation in this cell population. Progenitor cells from human fetal liver or bone marrow ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kondo K,Kaneshima H,Mocarski ES

更新日期：1994-12-06 00:00:00

abstract：:It is believed that neural representations of recent experiences become reactivated during sleep, and that this process serves to stabilize associated memories in long-term memory. Here, we initiated this reactivation process for specific memories during slow-wave sleep. Participants studied 50 object-location associa...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： van Dongen EV,Takashima A,Barth M,Zapp J,Schad LR,Paller KA,Fernández G

更新日期：2012-06-26 00:00:00

abstract：:Although still poorly understood, the chemistry that occurs on the surfaces of interstellar dust particles profoundly affects the growth of molecules in the interstellar medium. The most important surface reaction is the conversion of atomic to molecular hydrogen, which is a precursor for all subsequent molecular deve...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Herbst E,Cuppen HM

更新日期：2006-08-15 00:00:00

abstract：:Ferulic, caffeic, chlorogenic, and ellagic acids, four naturally occurring plant phenols, inhibit the mutagenicity and cytotoxicity of (+/-)-7beta,8alpha-dihydroxy-9alpha, 10alpha-epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene (B[a]P 7,8-diol-9,10-epoxide-2), the only known ultimate carcinogenic metabolite of benzo[a]pyrene....

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Wood AW,Huang MT,Chang RL,Newmark HL,Lehr RE,Yagi H,Sayer JM,Jerina DM,Conney AH

更新日期：1982-09-01 00:00:00

abstract：:Cellular imbalance in the levels of antioxidants and reactive oxygen species resulting in apoptosis is directly associated with a number of parasitic infections, aging, and several genetic and multifactorial diseases. The baculovirus AcNPV-encoded antiapoptotic p35 gene prevents apoptosis induced by a variety of apopt...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Sah NK,Taneja TK,Pathak N,Begum R,Athar M,Hasnain SE

更新日期：1999-04-27 00:00:00

abstract：:For most intracellular structures with larger than molecular dimensions, little is known about the connection between underlying molecular activities and higher order organization such as size and shape. Here, we show that both the size and shape of the amphibian oocyte nucleolus ultimately arise because nucleoli beha...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Brangwynne CP,Mitchison TJ,Hyman AA

更新日期：2011-03-15 00:00:00

abstract：:Assembly of protein complexes is a key mechanism for achieving spatial and temporal coordination in processes involving many enzymes. Growth of rod-shaped bacteria is a well-studied example requiring such coordination; expansion of the cell wall is thought to involve coordination of the activity of synthetic enzymes w...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Lee TK,Tropini C,Hsin J,Desmarais SM,Ursell TS,Gong E,Gitai Z,Monds RD,Huang KC

更新日期：2014-03-25 00:00:00

abstract：:To assess the effect of transforming growth factor beta 1 on the skin in vivo, we have targeted its expression to the epidermis of transgenic mice. To ensure that active TGF-beta 1 was expressed, we used a porcine TGF-beta 1 cDNA with mutations of Cys-223-->Ser and Cys-225-->Ser, which allow constitutive activation. M...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Sellheyer K,Bickenbach JR,Rothnagel JA,Bundman D,Longley MA,Krieg T,Roche NS,Roberts AB,Roop DR

更新日期：1993-06-01 00:00:00

abstract：:Recent evidence suggests that the Myc and Mad1 proteins are implicated in the regulation of the gene encoding the human telomerase reverse transcriptase (hTERT), the catalytic subunit of telomerase. We have analyzed the in vivo interaction between endogenous c-Myc and Mad1 proteins and the hTERT promoter in HL60 cells...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Xu D,Popov N,Hou M,Wang Q,Björkholm M,Gruber A,Menkel AR,Henriksson M

更新日期：2001-03-27 00:00:00

abstract：:Ectopic expression of transcription factors can reprogram somatic cells to a pluripotent state. However, most of the studies used skin fibroblasts as the starting population for reprogramming, which usually take weeks for expansion from a single biopsy. We show here that induced pluripotent stem (iPS) cells can be gen...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Sun N,Panetta NJ,Gupta DM,Wilson KD,Lee A,Jia F,Hu S,Cherry AM,Robbins RC,Longaker MT,Wu JC

更新日期：2009-09-15 00:00:00

abstract：:Single cortical neurons in the mammalian brain receive signals arising from multiple sensory input channels. Dendritic integration of these afferent signals is critical in determining the amplitude and time course of the neurons' output signals. As of yet, little is known about the spatial and temporal organization of...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Varga Z,Jia H,Sakmann B,Konnerth A

更新日期：2011-09-13 00:00:00

abstract：:Heat shock factors (HSFs) are the master regulators of transcription under protein-damaging conditions, acting in an environment where the overall transcription is silenced. We determined the genomewide transcriptional program that is rapidly provoked by HSF1 and HSF2 under acute stress in human cells. Our results rev...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Vihervaara A,Sergelius C,Vasara J,Blom MA,Elsing AN,Roos-Mattjus P,Sistonen L

更新日期：2013-09-03 00:00:00

abstract：:The effect of RNA secondary structure on rho-independent and rho-dependent termination of transcription of T3 DNA by Escherichia coli RNA polymerase has been studied by incorporating, into nascent transcripts, base analogs that lead to altered base-pairing properties. A guanine --> hypoxanthine substitution, with atte...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Adhya S,Sarkar P,Valenzuela D,Maitra U

更新日期：1979-04-01 00:00:00

abstract：:Monocytes originate from precursors made in the bone and remain in the circulation for nearly 24 h. Much effort has been done to identify the molecules regulating transendothelial migration of monocytes during inflammatory conditions. In contrast, considerably less is known about the process of constitutive monocyte e...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Thomas-Ecker S,Lindecke A,Hatzmann W,Kaltschmidt C,Zänker KS,Dittmar T

更新日期：2007-03-27 00:00:00

abstract：:Microbial fatty acid derivatives are emerging as promising alternatives to fossil fuel derived transportation fuels. Among bacterial fatty acid synthases (FAS), the Escherichia coli FAS is perhaps the most well studied, but little is known about its steady-state kinetic behavior. Here we describe the reconstitution of...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Yu X,Liu T,Zhu F,Khosla C

更新日期：2011-11-15 00:00:00

abstract：:The complete amino acid and DNA sequences of the human 40-kDa keratin are reported. The DNA sequence encodes a protein of 44,098 Da, which is unique in that it lacks the terminal non-alpha-helical tail segment found in all other keratins. When the human 40-kDa keratin amino acid sequence is compared to the correspondi...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Eckert RL

更新日期：1988-02-01 00:00:00

abstract：:Experimental circular dichroic (CD) spectra of three proteins have been combined with estimates of the content of peptide-chain structural modes obtained from x-ray diffraction studies of the same proteins. Solution of the simultaneous equations at a series of wavelengths permits the construction of a CD spectrum for ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Saxena VP,Wetlaufer DB

更新日期：1971-05-01 00:00:00

abstract：:The study of gene family members has been aided by the isolation of related genes on the basis of DNA homology. We have adapted the polymerase chain reaction to screen animal genomes very rapidly and reliably for likely gene family members. Using conserved amino acid sequences to design degenerate oligonucleotide prim...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kamb A,Weir M,Rudy B,Varmus H,Kenyon C

更新日期：1989-06-01 00:00:00

abstract：:Human and murine MHC nonclassical class Ib-restricted invariant T (iT) cell subsets, such as invariant natural killer T cells (iNKT) and mucosal-associated invariant T cells, have specialized functions early in immune responses, especially in modulating subsequent adaptive immune responses. Here, we characterize a pro...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Edholm ES,Albertorio Saez LM,Gill AL,Gill SR,Grayfer L,Haynes N,Myers JR,Robert J

更新日期：2013-08-27 00:00:00

abstract：:We report a combined thermodynamic and structural characterization of a DNA tetraplex. Using spectroscopic and calorimetric techniques, we demonstrate that d(TG3T) and d(TG3T2G3T), in the presence of K+, form stable tetramolecular complexes. From differential scanning calorimetry measurements, we obtain the following ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Jin R,Gaffney BL,Wang C,Jones RA,Breslauer KJ

更新日期：1992-09-15 00:00:00

abstract：:New experiments using scanning probe microcopies and advanced optical methods allow us to study molecules as individuals, not just as populations. The findings of these studies not only include the confirmation of results expected from studies of bulk matter, but also give substantially new information concerning the ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Bai C,Wang C,Xie XS,Wolynes PG

更新日期：1999-09-28 00:00:00

abstract：:The antimicrobial peptide hepcidin appears to play a central role in the regulation of iron homeostasis. In intact animals, iron overload or the injection of lipopolysaccharide (LPS) stimulates transcription of HAMP, the gene that encodes hepcidin. In isolated hepatocytes, IL-6, an inflammatory cytokine the production...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Lee P,Peng H,Gelbart T,Beutler E

更新日期：2004-06-22 00:00:00

abstract：:We compute parameters characterizing many-body quantum chaos for a critical Fermi surface without quasiparticle excitations. We examine a theory of [Formula: see text] species of fermions at nonzero density coupled to a [Formula: see text] gauge field in two spatial dimensions and determine the Lyapunov rate and the b...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Patel AA,Sachdev S

更新日期：2017-02-21 00:00:00

abstract：:Ecosystem restoration aims to restore biodiversity and valuable functions that have been degraded or lost. The Coral Triangle is a hotspot for marine biodiversity held in its coral reefs, seagrass meadows, and mangrove forests, all of which are in global decline. These coastal ecosystems support valuable fisheries and...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Williams SL,Ambo-Rappe R,Sur C,Abbott JM,Limbong SR

更新日期：2017-11-07 00:00:00

abstract：:Genetic analysis of Parkinson disease (PD) has identified several genes whose mutation causes inherited parkinsonism, as well as risk loci for sporadic PD. PTEN-induced kinase 1 (PINK1) and parkin, linked to autosomal recessive PD, act in a common genetic pathway regulating the autophagic degradation of mitochondria, ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Ivatt RM,Sanchez-Martinez A,Godena VK,Brown S,Ziviani E,Whitworth AJ

更新日期：2014-06-10 00:00:00