Abstract:
:The molecular pathogenesis of salivary gland acinic cell carcinoma (AciCC) is poorly understood. The secretory Ca-binding phosphoprotein (SCPP) gene cluster at 4q13 encodes structurally related phosphoproteins of which some are specifically expressed at high levels in the salivary glands and constitute major components of saliva. Here we report on recurrent rearrangements [t(4;9)(q13;q31)] in AciCC that translocate active enhancer regions from the SCPP gene cluster to the region upstream of Nuclear Receptor Subfamily 4 Group A Member 3 (NR4A3) at 9q31. We show that NR4A3 is specifically upregulated in AciCCs, and that active chromatin regions and gene expression signatures in AciCCs are highly correlated with the NR4A3 transcription factor binding motif. Overexpression of NR4A3 in mouse salivary gland cells increases expression of known NR4A3 target genes and has a stimulatory functional effect on cell proliferation. We conclude that NR4A3 is upregulated through enhancer hijacking and has important oncogenic functions in AciCC.
journal_name
Nat Communjournal_title
Nature communicationsauthors
Haller F,Bieg M,Will R,Körner C,Weichenhan D,Bott A,Ishaque N,Lutsik P,Moskalev EA,Mueller SK,Bähr M,Woerner A,Kaiser B,Scherl C,Haderlein M,Kleinheinz K,Fietkau R,Iro H,Eils R,Hartmann A,Plass C,Wiemann S,Agadoi
10.1038/s41467-018-08069-xsubject
Has Abstractpub_date
2019-01-21 00:00:00pages
368issue
1issn
2041-1723pii
10.1038/s41467-018-08069-xjournal_volume
10pub_type
杂志文章abstract::Exfoliated two-dimensional (2D) sheets can readily stack to form flexible, free-standing films with lamellar microstructure. The interlayer spaces in such lamellar films form a percolated network of molecularly sized, 2D nanochannels that could be used to regulate molecular transport. Here we report self-assembled cla...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms8602
更新日期:2015-07-13 00:00:00
abstract::Metal-organic frameworks (MOFs) are well known for their tunable structure and porosity. Many studies have shown they are promising for various important applications, for which their performance can be further enhanced by encapsulating functional species, such as luminescent guest molecules, within the frameworks. Al...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms3717
更新日期:2013-01-01 00:00:00
abstract::A non-classical light source emitting pairs of identical photons represents a versatile resource of interdisciplinary importance with applications in quantum optics and quantum biology. To date, photon twins have mostly been generated using parametric downconversion sources, relying on Poissonian number distributions,...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms14870
更新日期:2017-04-03 00:00:00
abstract::Protein-protein interactions featuring intricate binding epitopes remain challenging targets for synthetic inhibitors. Interactions of NEMO, a scaffolding protein central to NF-κB signaling, exemplify this challenge. Various regulators are known to interact with different coiled coil regions of NEMO, but the topologic...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-020-15576-3
更新日期:2020-04-14 00:00:00
abstract::No method exists to measure large-scale translation of genes in uncultured organisms in microbiomes. To overcome this limitation, we develop MetaRibo-Seq, a method for simultaneous ribosome profiling of tens to hundreds of organisms in microbiome samples. MetaRibo-Seq was benchmarked against gold-standard Ribo-Seq in ...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-020-17081-z
更新日期:2020-06-29 00:00:00
abstract::The human brain has the capacity to rapidly change state, and in epilepsy these state changes can be catastrophic, resulting in loss of consciousness, injury and even death. Theoretical interpretations considering the brain as a dynamical system suggest that prior to a seizure, recorded brain signals may exhibit criti...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-020-15908-3
更新日期:2020-05-01 00:00:00
abstract::Increased somatic mitochondrial DNA (mtDNA) mutagenesis causes premature aging in mice, and mtDNA damage accumulates in the human brain with aging and neurodegenerative disorders such as Parkinson disease (PD). Here, we study the complete spectrum of mtDNA changes, including deletions, copy-number variation and point ...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms13548
更新日期:2016-11-22 00:00:00
abstract::The alloy-design strategy of combining multiple elements in near-equimolar ratios has shown great potential for producing exceptional engineering materials, often known as 'high-entropy alloys'. Understanding the elemental distribution, and, thus, the evolution of the configurational entropy during solidification, is ...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms6964
更新日期:2015-01-20 00:00:00
abstract::Across phyla, body size is linked to climate. For example, rearing fruit flies at lower temperatures results in bigger body sizes than those observed at higher temperatures. The underlying molecular basis of this effect is poorly understood. Here we provide evidence that the temperature-dependent regulation of Drosoph...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms10083
更新日期:2015-12-09 00:00:00
abstract::Human height is a representative phenotype to elucidate genetic architecture. However, the majority of large studies have been performed in European population. To investigate the rare and low-frequency variants associated with height, we construct a reference panel (N = 3,541) for genotype imputation by integrating t...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-019-12276-5
更新日期:2019-09-27 00:00:00
abstract::Bacterial contamination of biological channels, catheters or water resources is a major threat to public health, which can be amplified by the ability of bacteria to swim upstream. The mechanisms of this 'rheotaxis', the reorientation with respect to flow gradients, are still poorly understood. Here, we follow individ...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-019-11360-0
更新日期:2019-07-31 00:00:00
abstract::Clustering of the T-cell receptor (TCR) is thought to initiate downstream signalling. However, the detection of protein clustering with high spatial and temporal resolution remains challenging. Here we establish a Förster resonance energy transfer (FRET) sensor, named CliF, which reports intermolecular associations of...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms15100
更新日期:2017-04-28 00:00:00
abstract::Lymphocyte function-associated antigen 1 (LFA-1) affinity and avidity changes have been assumed to mediate adhesion to intercellular adhesion molecule-1 for T-cell conjugation to dendritic cells (DC). Although the T-cell receptor (TCR) and LFA-1 can generate intracellular signals, the immune cell adaptor protein linke...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms16001
更新日期:2017-07-12 00:00:00
abstract::The plausibility of any model in science comes from the extent of its interconnections to other models that are grounded in different premises and reasoning. Focusing research on paradoxes in those models, logic whereby they appear to generate unacceptable conclusions from seemingly indisputable premises, helps find t...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-018-07274-y
更新日期:2018-12-12 00:00:00
abstract::The original version of this Article contained an error in Fig. 2f, in which the phospholipid was incorrectly labelled 'PE' rather than the correct 'PC'. This has now been corrected in the PDF and HTML versions of the Article. ...
journal_title:Nature communications
pub_type: 杂志文章,已发布勘误
doi:10.1038/s41467-019-08907-6
更新日期:2019-02-19 00:00:00
abstract::Blood brain barrier (BBB) breakdown is not only a consequence of but also contributes to many neurological disorders, including stroke and Alzheimer's disease. How the basement membrane (BM) contributes to the normal functioning of the BBB remains elusive. Here we use conditional knockout mice and an acute adenovirus-...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms4413
更新日期:2014-03-03 00:00:00
abstract::Mitochondrial quality control is essential in highly structured cells such as neurons and muscles. In skeletal muscle the mitochondrial fission proteins are reduced in different physiopathological conditions including ageing sarcopenia, cancer cachexia and chemotherapy-induced muscle wasting. However, whether mitochon...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-019-10226-9
更新日期:2019-06-12 00:00:00
abstract::Hidden hearing loss (HHL) is a recently described auditory neuropathy believed to contribute to speech discrimination and intelligibility deficits in people with normal audiological tests. Animals and humans with HHL have normal auditory thresholds but defective cochlear neurotransmission, that is, reduced suprathresh...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms14487
更新日期:2017-02-17 00:00:00
abstract::Conventional interferometers usually utilize beam splitters for wave splitting and recombination. These interferometers are widely used for precision measurement. Their sensitivity for phase measurement is limited by the shot noise, which can be suppressed with squeezed states of light. Here we study a new type of int...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms4049
更新日期:2014-01-01 00:00:00
abstract::In higher plants, the hormone auxin orchestrates a diverse array of developmental and environmental responses mainly exerted via transcriptional control. In its absence, auxin-mediated transcription is postulated to be repressed by histone deacetylases, which convert chromatin into a highly packed inactive state. Here...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms4883
更新日期:2014-05-27 00:00:00
abstract::The coupling of ordered electronic phases with lattice, spin, and orbital degrees of freedom are of central interest in strongly correlated systems. Their interplay has been intensively studied from femtosecond to picosecond time scales, while their dynamics beyond nanoseconds are usually assumed to follow lattice coo...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-018-04199-4
更新日期:2018-05-04 00:00:00
abstract::Stackable select devices such as the oxide p-n junction diode and the Schottky diode (one-way switch) have been proposed for non-volatile unipolar resistive switching devices; however, bidirectional select devices (or two-way switch) need to be developed for bipolar resistive switching devices. Here we report on a ful...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms3629
更新日期:2013-01-01 00:00:00
abstract::FoxO proteins are major targets of insulin action. To better define the role of FoxO1 in mediating insulin effects in the liver, we generated liver-specific insulin receptor knockout (LIRKO) and IR/FoxO1 double knockout (LIRFKO) mice. Here we show that LIRKO mice are severely insulin resistant based on glucose, insuli...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms8079
更新日期:2015-05-12 00:00:00
abstract::Long-term depression (LTD) underlies learning and memory in various brain regions. Although postsynaptic AMPA receptor trafficking mediates LTD, its underlying molecular mechanisms remain largely unclear. Here we show that stargazin, a transmembrane AMPA receptor regulatory protein, forms a ternary complex with adapto...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms3759
更新日期:2013-01-01 00:00:00
abstract::Synthetic biology tools, such as modular parts and combinatorial DNA assembly, are routinely used to optimise the productivity of heterologous metabolic pathways for biosynthesis or substrate utilisation, yet it is well established that host strain background is just as important for determining productivity. Here we ...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-018-03143-w
更新日期:2018-05-22 00:00:00
abstract::Organic-inorganic hybrid perovskites are promising candidates for the next-generation solar cells. Many efforts have been made to study their structures in the search for a better mechanistic understanding to guide the materials optimization. Here, we investigate the structure instability of the single-crystalline CH3...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-018-07177-y
更新日期:2018-11-15 00:00:00
abstract::Seed germination and young seedling establishment should be tightly regulated to maximize plant survival and thereby enable successful propagation. Plants have evolved developmental signalling networks to integrate environmental cues for proper control of these critical processes, in which brassinosteroids are known t...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms5138
更新日期:2014-06-18 00:00:00
abstract::The energy-level alignment of molecular transistors can be controlled by external gating to move molecular orbitals with respect to the Fermi levels of the source and drain electrodes. Two-terminal molecular tunnelling junctions, however, lack a gate electrode and suffer from Fermi-level pinning, making it difficult t...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms12066
更新日期:2016-07-26 00:00:00
abstract::Gross chromosomal rearrangements (GCRs), such as translocations, deletions or inversions, are often generated by illegitimate repair between two DNA breakages at regions with nucleotide sequences that might potentially adopt a non-B DNA conformation. We previously established a plasmid-based model system that recapitu...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms2595
更新日期:2013-01-01 00:00:00
abstract::Epilepsy is a common brain disorder throughout history. Epilepsy-related ligand-receptor complex, LGI1-ADAM22, regulates synaptic transmission and has emerged as a determinant of brain excitability, as their mutations and acquired LGI1 autoantibodies cause epileptic disorders in human. Here, we report the crystal stru...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-018-03947-w
更新日期:2018-04-18 00:00:00