Defective mitochondrial DNA homeostasis in the substantia nigra in Parkinson disease.

Abstract:

:Increased somatic mitochondrial DNA (mtDNA) mutagenesis causes premature aging in mice, and mtDNA damage accumulates in the human brain with aging and neurodegenerative disorders such as Parkinson disease (PD). Here, we study the complete spectrum of mtDNA changes, including deletions, copy-number variation and point mutations, in single neurons from the dopaminergic substantia nigra and other brain areas of individuals with Parkinson disease and neurologically healthy controls. We show that in dopaminergic substantia nigra neurons of healthy individuals, mtDNA copy number increases with age, maintaining the pool of wild-type mtDNA population in spite of accumulating deletions. This upregulation fails to occur in individuals with Parkinson disease, however, resulting in depletion of the wild-type mtDNA population. By contrast, neuronal mtDNA point mutational load is not increased in Parkinson disease. Our findings suggest that dysregulation of mtDNA homeostasis is a key process in the pathogenesis of neuronal loss in Parkinson disease.

journal_name

Nat Commun

journal_title

Nature communications

authors

Dölle C,Flønes I,Nido GS,Miletic H,Osuagwu N,Kristoffersen S,Lilleng PK,Larsen JP,Tysnes OB,Haugarvoll K,Bindoff LA,Tzoulis C

doi

10.1038/ncomms13548

subject

Has Abstract

pub_date

2016-11-22 00:00:00

pages

13548

issn

2041-1723

pii

ncomms13548

journal_volume

7

pub_type

杂志文章
  • Weaker plant-enemy interactions decrease tree seedling diversity with edge-effects in a fragmented tropical forest.

    abstract::In fragmented forests, tree diversity declines near edges but the ecological processes underlying this loss of diversity remain poorly understood. Theory predicts that top-down regulation of seedling recruitment by insect herbivores and fungal pathogens contributes to maintaining tree diversity in forests, but it is u...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-018-06997-2

    authors: Krishnadas M,Bagchi R,Sridhara S,Comita LS

    更新日期:2018-10-30 00:00:00

  • Microglia and monocytes synergistically promote the transition from acute to chronic pain after nerve injury.

    abstract::Microglia and peripheral monocytes contribute to hypersensitivity in rodent models of neuropathic pain. However, the precise respective function of microglia and peripheral monocytes has not been investigated in these models. To address this question, here we combined transgenic mice and pharmacological tools to speci...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms12029

    authors: Peng J,Gu N,Zhou L,B Eyo U,Murugan M,Gan WB,Wu LJ

    更新日期:2016-06-28 00:00:00

  • Highly selective inhibition of histone demethylases by de novo macrocyclic peptides.

    abstract::The JmjC histone demethylases (KDMs) are linked to tumour cell proliferation and are current cancer targets; however, very few highly selective inhibitors for these are available. Here we report cyclic peptide inhibitors of the KDM4A-C with selectivity over other KDMs/2OG oxygenases, including closely related KDM4D/E ...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms14773

    authors: Kawamura A,Münzel M,Kojima T,Yapp C,Bhushan B,Goto Y,Tumber A,Katoh T,King ON,Passioura T,Walport LJ,Hatch SB,Madden S,Müller S,Brennan PE,Chowdhury R,Hopkinson RJ,Suga H,Schofield CJ

    更新日期:2017-04-06 00:00:00

  • Imaging with a small number of photons.

    abstract::Low-light-level imaging techniques have application in many diverse fields, ranging from biological sciences to security. A high-quality digital camera based on a multi-megapixel array will typically record an image by collecting of order 10(5) photons per pixel, but by how much could this photon flux be reduced? In t...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms6913

    authors: Morris PA,Aspden RS,Bell JE,Boyd RW,Padgett MJ

    更新日期:2015-01-05 00:00:00

  • Conformational maps of human 20S proteasomes reveal PA28- and immuno-dependent inter-ring crosstalks.

    abstract::Hydrogen-Deuterium eXchange coupled to Mass Spectrometry (HDX-MS) is now common practice in structural biology. However, it is most of the time applied to rather small oligomeric complexes. Here, we report on the use of HDX-MS to investigate conformational differences between the human standard 20S (std20S) and immuno...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-19934-z

    authors: Lesne J,Locard-Paulet M,Parra J,Zivković D,Menneteau T,Bousquet MP,Burlet-Schiltz O,Marcoux J

    更新日期:2020-12-01 00:00:00

  • A supervised learning framework for chromatin loop detection in genome-wide contact maps.

    abstract::Accurately predicting chromatin loops from genome-wide interaction matrices such as Hi-C data is critical to deepening our understanding of proper gene regulation. Current approaches are mainly focused on searching for statistically enriched dots on a genome-wide map. However, given the availability of orthogonal data...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-17239-9

    authors: Salameh TJ,Wang X,Song F,Zhang B,Wright SM,Khunsriraksakul C,Ruan Y,Yue F

    更新日期:2020-07-09 00:00:00

  • Editing of human K(V)1.1 channel mRNAs disrupts binding of the N-terminus tip at the intracellular cavity.

    abstract::In the nervous system, A→I RNA editing has an important role in regulating neuronal excitability. Ligand-gated membrane receptors, synaptic proteins, as well as ion channels, are targets for recoding by RNA editing. Although scores of editing sites have been identified in the mammalian brain, little is known about the...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms1446

    authors: Gonzalez C,Lopez-Rodriguez A,Srikumar D,Rosenthal JJ,Holmgren M

    更新日期:2011-08-16 00:00:00

  • Author Correction: Tespa1 regulates T cell receptor-induced calcium signals by recruiting inositol 1,4,5-trisphosphate receptors.

    abstract::This corrects the article DOI: 10.1038/ncomms15732. ...

    journal_title:Nature communications

    pub_type: 杂志文章,已发布勘误

    doi:10.1038/ncomms16183

    authors: Liang J,Lyu J,Zhao M,Li D,Zheng M,Fang Y,Zhao F,Lou J,Guo C,Wang L,Wang D,Liu W,Lu L

    更新日期:2018-03-12 00:00:00

  • Human noise blindness drives suboptimal cognitive inference.

    abstract::Humans typically make near-optimal sensorimotor judgements but show systematic biases when making more cognitive judgements. Here we test the hypothesis that, while humans are sensitive to the noise present during early sensory encoding, the "optimality gap" arises because they are blind to noise introduced by later c...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-019-09330-7

    authors: Herce Castañón S,Moran R,Ding J,Egner T,Bang D,Summerfield C

    更新日期:2019-04-12 00:00:00

  • Imaging enzyme-triggered self-assembly of small molecules inside live cells.

    abstract::Self-assembly of small molecules in water to form nanofibres, besides generating sophisticated biomaterials, promises a simple system inside cells for regulating cellular processes. But lack of a convenient approach for studying the self-assembly of small molecules inside cells hinders the development of such systems....

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms2040

    authors: Gao Y,Shi J,Yuan D,Xu B

    更新日期:2012-01-01 00:00:00

  • Earthworms facilitate carbon sequestration through unequal amplification of carbon stabilization compared with mineralization.

    abstract::A recent review concluded that earthworm presence increases CO₂ emissions by 33% but does not affect soil organic carbon stocks. However, the findings are controversial and raise new questions. Here we hypothesize that neither an increase in CO₂ emission nor in stabilized carbon would entirely reflect the earthworms' ...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms3576

    authors: Zhang W,Hendrix PF,Dame LE,Burke RA,Wu J,Neher DA,Li J,Shao Y,Fu S

    更新日期:2013-01-01 00:00:00

  • Topographical pathways guide chemical microswimmers.

    abstract::Achieving control over the directionality of active colloids is essential for their use in practical applications such as cargo carriers in microfluidic devices. So far, guidance of spherical Janus colloids was mainly realized using specially engineered magnetic multilayer coatings combined with external magnetic fiel...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms10598

    authors: Simmchen J,Katuri J,Uspal WE,Popescu MN,Tasinkevych M,Sánchez S

    更新日期:2016-02-09 00:00:00

  • Weakening of the stratospheric polar vortex by Arctic sea-ice loss.

    abstract::Successive cold winters of severely low temperatures in recent years have had critical social and economic impacts on the mid-latitude continents in the Northern Hemisphere. Although these cold winters are thought to be partly driven by dramatic losses of Arctic sea-ice, the mechanism that links sea-ice loss to cold w...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms5646

    authors: Kim BM,Son SW,Min SK,Jeong JH,Kim SJ,Zhang X,Shim T,Yoon JH

    更新日期:2014-09-02 00:00:00

  • Induced cortical tension restores functional junctions in adhesion-defective carcinoma cells.

    abstract::Normal epithelial cells are stably connected to each other via the apical junctional complex (AJC). AJCs, however, tend to be disrupted during tumor progression, and this process is implicated in cancer dissemination. Here, using colon carcinoma cells that fail to form AJCs, we investigated molecular defects behind th...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-017-01945-y

    authors: Ito S,Okuda S,Abe M,Fujimoto M,Onuki T,Nishimura T,Takeichi M

    更新日期:2017-11-28 00:00:00

  • Calcium oscillations coordinate feather mesenchymal cell movement by SHH dependent modulation of gap junction networks.

    abstract::Collective cell migration mediates multiple tissue morphogenesis processes. Yet how multi-dimensional mesenchymal cell movements are coordinated remains mostly unknown. Here we report that coordinated mesenchymal cell migration during chicken feather elongation is accompanied by dynamic changes of bioelectric currents...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-018-07661-5

    authors: Li A,Cho JH,Reid B,Tseng CC,He L,Tan P,Yeh CY,Wu P,Li Y,Widelitz RB,Zhou Y,Zhao M,Chow RH,Chuong CM

    更新日期:2018-12-18 00:00:00

  • Advection shapes Southern Ocean microbial assemblages independent of distance and environment effects.

    abstract::Although environmental selection and spatial separation have been shown to shape the distribution and abundance of marine microorganisms, the effects of advection (physical transport) have not been directly tested. Here we examine 25 samples covering all major water masses of the Southern Ocean to determine the effect...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms3457

    authors: Wilkins D,van Sebille E,Rintoul SR,Lauro FM,Cavicchioli R

    更新日期:2013-01-01 00:00:00

  • Identification of the PGRMC1 protein complex as the putative sigma-2 receptor binding site.

    abstract::The sigma-2 receptor, whose gene remains to be cloned, has been validated as a biomarker for tumour cell proliferation. Here we report the use of a novel photoaffinity probe, WC-21, to identify the sigma-2 receptor-binding site. WC-21, a sigma-2 ligand containing both a photoactive azide moiety and a fluorescein isoth...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms1386

    authors: Xu J,Zeng C,Chu W,Pan F,Rothfuss JM,Zhang F,Tu Z,Zhou D,Zeng D,Vangveravong S,Johnston F,Spitzer D,Chang KC,Hotchkiss RS,Hawkins WG,Wheeler KT,Mach RH

    更新日期:2011-07-05 00:00:00

  • Atomic scale dynamics of ultrasmall germanium clusters.

    abstract::Starting from the gas phase, small clusters can be produced and deposited with huge flexibility with regard to composition, materials choice and cluster size. Despite many advances in experimental characterization, a detailed morphology of such clusters is still lacking. Here we present an atomic scale observation as ...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms1887

    authors: Bals S,Van Aert S,Romero CP,Lauwaet K,Van Bael MJ,Schoeters B,Partoens B,Yücelen E,Lievens P,Van Tendeloo G

    更新日期:2012-06-12 00:00:00

  • A broadly tunable synthesis of linear α-olefins.

    abstract::The catalytic synthesis of linear α-olefins from ethylene is a technologically highly important reaction. A synthesis concept allowing the formation of selective products and various linear α-olefin product distributions with one catalyst system is highly desirable. Here, we describe a trimetallic catalyst system (Y-A...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-017-01507-2

    authors: Gollwitzer A,Dietel T,Kretschmer WP,Kempe R

    更新日期:2017-10-31 00:00:00

  • Ultrafast electron cooling in an expanding ultracold plasma.

    abstract::Plasma dynamics critically depends on density and temperature, thus well-controlled experimental realizations are essential benchmarks for theoretical models. The formation of an ultracold plasma can be triggered by ionizing a tunable number of atoms in a micrometer-sized volume of a 87Rb Bose-Einstein condensate (BEC...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-20815-8

    authors: Kroker T,Großmann M,Sengstock K,Drescher M,Wessels-Staarmann P,Simonet J

    更新日期:2021-01-26 00:00:00

  • Prebiotic plausibility and networks of paradox-resolving independent models.

    abstract::The plausibility of any model in science comes from the extent of its interconnections to other models that are grounded in different premises and reasoning. Focusing research on paradoxes in those models, logic whereby they appear to generate unacceptable conclusions from seemingly indisputable premises, helps find t...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-018-07274-y

    authors: Benner SA

    更新日期:2018-12-12 00:00:00

  • Drought reduces blue-water fluxes more strongly than green-water fluxes in Europe.

    abstract::Drought comprehensively affects different interlinked aspects of the terrestrial water cycle, which have so far been mostly investigated without direct comparison. Resolving the partitioning of water deficit during drought into blue-water runoff and green-water evapotranspiration fluxes is critical, as anomalies in th...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-018-06013-7

    authors: Orth R,Destouni G

    更新日期:2018-09-06 00:00:00

  • Modeling medulloblastoma in vivo and with human cerebellar organoids.

    abstract::Medulloblastoma (MB) is the most common malignant brain tumor in children and among the subtypes, Group 3 MB has the worst outcome. Here, we perform an in vivo, patient-specific screen leading to the identification of Otx2 and c-MYC as strong Group 3 MB inducers. We validated our findings in human cerebellar organoids...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-019-13989-3

    authors: Ballabio C,Anderle M,Gianesello M,Lago C,Miele E,Cardano M,Aiello G,Piazza S,Caron D,Gianno F,Ciolfi A,Pedace L,Mastronuzzi A,Tartaglia M,Locatelli F,Ferretti E,Giangaspero F,Tiberi L

    更新日期:2020-01-29 00:00:00

  • Ultraflexible organic amplifier with biocompatible gel electrodes.

    abstract::In vivo electronic monitoring systems are promising technology to obtain biosignals with high spatiotemporal resolution and sensitivity. Here we demonstrate the fabrication of a biocompatible highly conductive gel composite comprising multi-walled carbon nanotube-dispersed sheet with an aqueous hydrogel. This gel comp...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms11425

    authors: Sekitani T,Yokota T,Kuribara K,Kaltenbrunner M,Fukushima T,Inoue Y,Sekino M,Isoyama T,Abe Y,Onodera H,Someya T

    更新日期:2016-04-29 00:00:00

  • Mondo complexes regulate TFEB via TOR inhibition to promote longevity in response to gonadal signals.

    abstract::Germline removal provokes longevity in several species and shifts resources towards survival and repair. Several Caenorhabditis elegans transcription factors regulate longevity arising from germline removal; yet, how they work together is unknown. Here we identify a Myc-like HLH transcription factor network comprised ...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms10944

    authors: Nakamura S,Karalay Ö,Jäger PS,Horikawa M,Klein C,Nakamura K,Latza C,Templer SE,Dieterich C,Antebi A

    更新日期:2016-03-22 00:00:00

  • AdipoR1/AdipoR2 dual agonist recovers nonalcoholic steatohepatitis and related fibrosis via endoplasmic reticulum-mitochondria axis.

    abstract::Chronic nonalcoholic steatohepatitis (NASH) is a metabolic disorder that often leads to liver fibrosis, a condition with limited therapy options. Adiponectin is an adipocytokine that regulates glucose and lipid metabolism via binding to its receptors AdipoR1 and AdipoR2, and AdipoRs signaling is reported to enhance fa...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-19668-y

    authors: Xu H,Zhao Q,Song N,Yan Z,Lin R,Wu S,Jiang L,Hong S,Xie J,Zhou H,Wang R,Jiang X

    更新日期:2020-11-16 00:00:00

  • Abstract rule neurons in the endbrain support intelligent behaviour in corvid songbirds.

    abstract::Despite the lack of a layered neocortex and fundamental differences in endbrain organization in birds compared with mammals, intelligent species evolved from both vertebrate classes. Among birds, corvids show exceptional cognitive flexibility. Here we explore the neuronal foundation of corvid cognition by recording si...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms3878

    authors: Veit L,Nieder A

    更新日期:2013-01-01 00:00:00

  • Self-templated synthesis of uniform hollow spheres based on highly conjugated three-dimensional covalent organic frameworks.

    abstract::Covalent organic frameworks (COFs) have served as a family of porous crystalline molecules for various promising applications. However, controllable synthesis of COFs with uniform morphology is paramount yet still remains quite challenging. Herein, we report self-templated synthesis of uniform and unique hollow sphere...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-18844-4

    authors: Liu YY,Li XC,Wang S,Cheng T,Yang H,Liu C,Gong Y,Lai WY,Huang W

    更新日期:2020-11-03 00:00:00

  • The AAA + ATPase TorsinA polymerizes into hollow helical tubes with 8.5 subunits per turn.

    abstract::TorsinA is an ER-resident AAA + ATPase, whose deletion of glutamate E303 results in the genetic neuromuscular disease primary dystonia. TorsinA is an unusual AAA + ATPase that needs an external activator. Also, it likely does not thread a peptide substrate through a narrow central channel, in contrast to its closest s...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-019-11194-w

    authors: Demircioglu FE,Zheng W,McQuown AJ,Maier NK,Watson N,Cheeseman IM,Denic V,Egelman EH,Schwartz TU

    更新日期:2019-07-22 00:00:00

  • First direct observation of the Van Hove singularity in the tunnelling spectra of cuprates.

    abstract::In two-dimensional (2D) lattices, the electronic levels are unevenly spaced, and the density of states (DOS) displays a logarithmic divergence known as the Van Hove singularity (VHS). This is the case in particular for the layered cuprate superconductors. The scanning tunnelling microscope (STM) probes the DOS, and is...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms1229

    authors: Piriou A,Jenkins N,Berthod C,Maggio-Aprile I,Fischer O

    更新日期:2011-01-01 00:00:00