Combined molecular dynamics and neural network method for predicting protein antifreeze activity.

abstract：:Agrobacterium tumefaciens harboring the tumor-inducing Ti plasmid incites crown gall tumor on dicotyledonous species. Upon infection of these plants, Ti plasmid DNA sequence is stably transferred (T-DNA) by unknown mechanisms to plant cells to be integrated into nuclear DNA. The T-DNA processing and transfer require t...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Usami S,Okamoto S,Takebe I,Machida Y

更新日期：1988-06-01 00:00:00

abstract：:A cDNA library prepared from human liver has been screened for factor IX (Christmas factor), a clotting factor that participates in the middle phase of blood coagulation. The library was screened with a single-stranded DNA prepared from enriched mRNA for baboon factor IX and a synthetic oligonucleotide mixture. A plas...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kurachi K,Davie EW

更新日期：1982-11-01 00:00:00

abstract：:We present a mechanism by which organisms with only a single photoreceptor, which have a monochromatic view of the world, can achieve color discrimination. An off-axis pupil and the principle of chromatic aberration (where different wavelengths come to focus at different distances behind a lens) can combine to provide...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Stubbs AL,Stubbs CW

更新日期：2016-07-19 00:00:00

abstract：:Adoptive cellular immunotherapy, infusions of interleukin 2 (IL-2) in conjunction with in vitro-activated killer cells, has brought new hope to patients with cancer. The broad application of this strategy, however, is constrained by the need for repeated leukapheresis and by the labor-intensive process of in vitro act...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Nakajima F,Khanna A,Xu G,Lagman M,Haschemeyer R,Mouradian J,Wang JC,Stenzel KH,Rubin AL,Suthanthiran M

更新日期：1994-08-16 00:00:00

abstract：:Defining prospective pathways by which zoonoses evolve and emerge as human pathogens is critical for anticipating and controlling both natural and deliberate pandemics. However, predicting tenable pathways of animal-to-human movement has been hindered by challenges in identifying reservoir species, cultivating zoonoti...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Becker MM,Graham RL,Donaldson EF,Rockx B,Sims AC,Sheahan T,Pickles RJ,Corti D,Johnston RE,Baric RS,Denison MR

更新日期：2008-12-16 00:00:00

abstract：:We have previously described an antigen-specific I-Ad-restricted T-cell hybridoma, A1.1, that constitutively releases an antigen-specific immunoregulatory activity into supernatants. Using retrovirally mediated gene transfer, we have found that transfer of the T-cell receptor alpha chain (TCR alpha) gene from A1.1 to ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Green DR,Bissonnette R,Zheng HG,Onda T,Echeverri F,Mogil RJ,Steele JK,Voralia M,Fotedar A

更新日期：1991-10-01 00:00:00

abstract：:A long (20-30 micrometer), wide (3-5 micrometer) microbial-mat bacterium from the Ebro Delta (Tarragona, Spain) was grown in mixed culture and videographed live. Intracellular elemental sulfur globules and unique cell termini were observed in scanning-electron-microprobe and transmission-electron micrographs. A polar ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Guerrero R,Haselton A,Solé M,Wier A,Margulis L

更新日期：1999-09-28 00:00:00

abstract：:Kaposi's sarcoma-associated herpesvirus (KSHV), etiologically associated with Kaposi's sarcoma, uses integrins (α3β1, αVβ3, and αVβ5) and associated signaling to enter human dermal microvascular endothelial cells (HMVEC-d), an in vivo target of infection. KSHV infection activated c-Cbl, which induced the selective tra...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Chakraborty S,Veettil MV,Bottero V,Chandran B

更新日期：2012-05-08 00:00:00

abstract：:The radial distributions of the Calpha and side-chain atoms in a sample of 13 native proteins have been examined. It is found that there are substantial differences in behavior between different atoms of the same amino acid. In particular, the Calpha atoms of polar residues show no particular preference for being far ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Rackovsky S,Scheraga HA

更新日期：1977-12-01 00:00:00

abstract：:We stabilize nematic droplets with handles against surface tension-driven instabilities, using a yield-stress material as outer fluid, and study the complex nematic textures and defect structures that result from the competition between topological constraints and the elasticity of the nematic liquid crystal. We uncov...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Pairam E,Vallamkondu J,Koning V,van Zuiden BC,Ellis PW,Bates MA,Vitelli V,Fernandez-Nieves A

更新日期：2013-06-04 00:00:00

abstract：:Primary--i.e., nonsyndromal-postlingual deafness is inherited as an autosomal dominant phenotype in a large kindred in Costa Rica. Genetically susceptible individuals begin to lose hearing at low frequencies at about age 10 years, after language and speaking are learned. Deafness inevitably progresses by age 30 years ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Leon PE,Raventos H,Lynch E,Morrow J,King MC

更新日期：1992-06-01 00:00:00

abstract：:The tightly coupled nature of the reaction sequence catalyzed by monoterpene cyclases has precluded direct observation of the topologically required isomerization step leading from geranyl pyrophosphate to the presumptive, enzyme-bound, tertiary allylic intermediate linalyl pyrophosphate, which ultimately cyclizes to ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Wheeler CJ,Croteau RB

更新日期：1987-07-01 00:00:00

abstract：:cGMP is a key regulatory molecule in visual transduction, integration of neuronal response to excitatory neurotransmitters, relaxation of smooth muscle, intestinal secretion of water and salt, and reabsorption of sodium and water in the distal tubules of the nephron. Some of these cellular functions are associated wit...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Ruth P,Wang GX,Boekhoff I,May B,Pfeifer A,Penner R,Korth M,Breer H,Hofmann F

更新日期：1993-04-01 00:00:00

abstract：:A PCR strategy is described for global amplification of DNA from a single eukaryotic cell that enables the comprehensive analysis of the whole genome. By comparative genomic hybridization, not only gross DNA copy number variations, such as monosomic X and trisomic 21 in single male cells and cells from Down's syndrome...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Klein CA,Schmidt-Kittler O,Schardt JA,Pantel K,Speicher MR,Riethmüller G

更新日期：1999-04-13 00:00:00

abstract：:To some extent, the genetic theory of adaptive evolution in bacteria is a simple extension of that developed for sexually reproducing eukaryotes. In other, fundamental ways, the process of adaptive evolution in bacteria is quantitatively and qualitatively different from that of organisms for which recombination is an ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Levin BR,Bergstrom CT

更新日期：2000-06-20 00:00:00

abstract：:The primary photochemistry of Fe-depleted and Zn-reconstituted reaction centers from Rhodopseudomonas sphaeroides R-26.1 was studied by transient absorption spectroscopy and compared with native, Fe(2+)-containing reaction centers. Excitation of metal-free reaction centers with 30-ps flashes produced the initial charg...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kirmaier C,Holten D,Debus RJ,Feher G,Okamura MY

更新日期：1986-09-01 00:00:00

abstract：:Electron micrographs of replicating lambda DNA molecules, during the period of progeny-particle DNA formation, show single-tailed circular structures. The tails are, predominantly, shorter than one viral genome. ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kiger JA Jr,Sinsheimer RL

更新日期：1971-01-01 00:00:00

abstract：:We have investigated the minimum extent of DNA sequence required for the attachment site of bacteriophage lambda to function in integrative recombination. A DNA fragment carrying the phage attachment site (attP) of bacteriophage lambda was trimmed, recloned, and tested for recombination proficiency. In order to recomb...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Mizuuchi M,Mizuuchi K

更新日期：1980-06-01 00:00:00

abstract：:As countries pursue sustainable development across sectors as diverse as health, agriculture, and infrastructure, sectoral policies interact, generating synergies that alter their effectiveness. Identifying those synergies ex ante facilitates the harmonization of policies and provides an important lever to achieve the...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Pedercini M,Arquitt S,Collste D,Herren H

更新日期：2019-11-12 00:00:00

abstract：:The dauer larva state and the age-1 mutation, both of which extend life-span in Caenorhabditis elegans, were tested for hyperresistance to cellular damage that may be relevant to aging. The age-1 strain TJ401 displayed hyperresistance to oxidative stress relative to its parental strain. The activities of two enzymes t...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Larsen PL

更新日期：1993-10-01 00:00:00

abstract：:Plant soil specialists contribute greatly to global diversity; however, the ecoevolutionary forces responsible for generating this diversity are poorly understood. We integrate molecular phylogenies with descriptive and experimental ecological data, creating a powerful framework with which to elucidate forces driving ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Cacho NI,Strauss SY

更新日期：2014-10-21 00:00:00

abstract：:Autophagy is responsible for nonspecific, bulk degradation of cytoplasmic components. Recent work has revealed also that there is specific, autophagic degradation of polyubiquitinated protein aggregates, whose buildup occurs during neurodegenerative disease. Here, we report that simple mono-ubiquitination of normally ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kim PK,Hailey DW,Mullen RT,Lippincott-Schwartz J

更新日期：2008-12-30 00:00:00

abstract：:The properties of glycine receptors (GlyRs) from newborn and adult rat spinal cord were studied in Xenopus oocytes injected with whole mRNA or the heavy (H) or light (L) mRNA fractions encoding their respective GlyRs. Mean open times and conductances of channels gated by H- or L-GlyRs were determined by noise analysis...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Morales A,Nguyen QT,Miledi R

更新日期：1994-04-12 00:00:00

abstract：:Here we show how a simple inorganic salt can spontaneously form autocatalytic sets of replicating inorganic molecules that work via molecular recognition based on the {PMo12} ≡ [PMo12O40]3- Keggin ion, and {Mo36} ≡ [H3Mo57M6(NO)6O183(H2O)18]22- cluster. These small clusters are able to catalyze their own formation via...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Miras HN,Mathis C,Xuan W,Long DL,Pow R,Cronin L

更新日期：2020-05-19 00:00:00

abstract：:Insulin activates sterol regulatory element-binding protein-1c (SREBP-1c) in liver, thereby increasing fatty acid and triglyceride synthesis. We created a line of transgenic rats that produce epitope-tagged human SREBP-1c in liver under control of the constitutive apolipoprotein E promoter/enhancer. This system allows...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Owen JL,Zhang Y,Bae SH,Farooqi MS,Liang G,Hammer RE,Goldstein JL,Brown MS

更新日期：2012-10-02 00:00:00

abstract：:In biosynthesis of the pancreatic cancer drug streptozotocin, the tridomain nonheme-iron oxygenase SznF hydroxylates Nδ and Nω' of Nω-methyl-l-arginine before oxidatively rearranging the triply modified guanidine to the N-methyl-N-nitrosourea pharmacophore. A previously published structure visualized the monoiron cofa...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： McBride MJ,Pope SR,Hu K,Okafor CD,Balskus EP,Bollinger JM Jr,Boal AK

更新日期：2021-01-26 00:00:00

abstract：:Nitrogenase is an ATP-requiring enzyme capable of carrying out multielectron reductions of inert molecules. A purified remodeled nitrogenase containing two amino acid substitutions near the site of its FeMo cofactor was recently described as having the capacity to reduce carbon dioxide (CO2) to methane (CH4). Here, we...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Fixen KR,Zheng Y,Harris DF,Shaw S,Yang ZY,Dean DR,Seefeldt LC,Harwood CS

更新日期：2016-09-06 00:00:00

abstract：:Staphylococcus aureus is a major cause of community-acquired and nosocomial infections including the life-threatening conditions endocarditis, necrotizing pneumonia, necrotizing fasciitis, and septicemia. Toll-like receptor (TLR)-2, a membrane-bound microbial sensor, detects staphylococcal components, but macrophages ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Hruz P,Zinkernagel AS,Jenikova G,Botwin GJ,Hugot JP,Karin M,Nizet V,Eckmann L

更新日期：2009-08-04 00:00:00

abstract：:Niemann-Pick type C disease (NP-C) is an inherited neurovisceral lipid storage disorder characterized by progressive neurodegeneration. Most cases of NP-C result from inactivating mutations of NPC1, a recently identified member of a family of genes encoding membrane-bound proteins containing putative sterol sensing do...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Patel SC,Suresh S,Kumar U,Hu CY,Cooney A,Blanchette-Mackie EJ,Neufeld EB,Patel RC,Brady RO,Patel YC,Pentchev PG,Ong WY

更新日期：1999-02-16 00:00:00

abstract：:A DNA fragment homologous to U6 small nuclear RNA was isolated from a human genomic library and sequenced. The immediate 5'-flanking region of the U6 DNA clone had significant homology with a potential mouse U6 gene, including a "TATA box" at a position 26-29 nucleotides upstream from the transcription start site. Alt...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kunkel GR,Maser RL,Calvet JP,Pederson T

更新日期：1986-11-01 00:00:00