Induction of differentiation of intrahepatic cholangiocarcinoma cells to functional hepatocytes using an organoid culture system.

Abstract:

:Intrahepatic cholangiocarcinoma (IHCC) is a highly aggressive malignancy with a poor prognosis. It is thought to originate from cholangiocytes, which are the component cells of intrahepatic bile ducts. However, as patients with viral hepatitis often develop IHCC, it has been suggested that transformed hepatocytes may play a role in IHCC development. To investigate whether IHCC cells can be converted to functional hepatocytes, we established organoids derived from human IHCC and cultured them under conditions suitable for hepatocyte differentiation. IHCC organoids after hepatocyte differentiation acquired functions of mature hepatocytes such as albumin secretion, bile acid production and increased CYP3A4 activity. Studies using a mouse model of IHCC indicate that Wnt3a derived from macrophages recruited upon inflammation in the liver may promote the malignant transformation of hepatocytes to IHCC cells. The results of the present study support the recently proposed hypothesis that IHCC cells are derived from hepatocytes.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Saito Y,Nakaoka T,Muramatsu T,Ojima H,Sukeda A,Sugiyama Y,Uchida R,Furukawa R,Kitahara A,Sato T,Kanai Y,Saito H

doi

10.1038/s41598-018-21121-6

subject

Has Abstract

pub_date

2018-02-12 00:00:00

pages

2821

issue

1

issn

2045-2322

pii

10.1038/s41598-018-21121-6

journal_volume

8

pub_type

杂志文章
  • RNA-Seq identifies genes whose proteins are transformative in the differentiation of cytotrophoblast to syncytiotrophoblast, in human primary villous and BeWo trophoblasts.

    abstract::The fusion of villous cytotrophoblasts into the multinucleated syncytiotrophoblast is critical for the essential functions of the mammalian placenta. Using RNA-Seq gene expression and quantitative protein expression, we identified genes and their cognate proteins which are coordinately up- or down-regulated in two cel...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-23379-2

    authors: Azar C,Valentine M,Trausch-Azar J,Druley T,Nelson DM,Schwartz AL

    更新日期:2018-03-23 00:00:00

  • Circular RNA differential expression in blood cell populations and exploration of circRNA deregulation in pediatric acute lymphoblastic leukemia.

    abstract::Circular RNAs (circRNAs) are abundantly expressed in the haematopoietic compartment, but knowledge on their diversity among blood cell types is still limited. Nevertheless, emerging data indicate an array of circRNA functions exerted through interactions with other RNAs and proteins, by translation into peptides, and ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-50864-z

    authors: Gaffo E,Boldrin E,Dal Molin A,Bresolin S,Bonizzato A,Trentin L,Frasson C,Debatin KM,Meyer LH,Te Kronnie G,Bortoluzzi S

    更新日期:2019-10-11 00:00:00

  • Bile signalling promotes chronic respiratory infections and antibiotic tolerance.

    abstract::Despite aggressive antimicrobial therapy, many respiratory pathogens persist in the lung, underpinning the chronic inflammation and eventual lung decline that are characteristic of respiratory disease. Recently, bile acid aspiration has emerged as a major comorbidity associated with a range of lung diseases, shaping t...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep29768

    authors: Reen FJ,Flynn S,Woods DF,Dunphy N,Chróinín MN,Mullane D,Stick S,Adams C,O'Gara F

    更新日期:2016-07-19 00:00:00

  • Universal roles of hydrogen in electrochemical performance of graphene: high rate capacity and atomistic origins.

    abstract::Atomic hydrogen exists ubiquitously in graphene materials made by chemical methods. Yet determining the effect of hydrogen on the electrochemical performance of graphene remains a significant challenge. Here we report the experimental observations of high rate capacity in hydrogen-treated 3-dimensional (3D) graphene n...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep16190

    authors: Ye J,Ong MT,Heo TW,Campbell PG,Worsley MA,Liu Y,Shin SJ,Charnvanichborikarn S,Matthews MJ,Bagge-Hansen M,Lee JR,Wood BC,Wang YM

    更新日期:2015-11-05 00:00:00

  • Genome and secretome analysis of Pochonia chlamydosporia provide new insight into egg-parasitic mechanisms.

    abstract::Pochonia chlamydosporia infects eggs and females of economically important plant-parasitic nematodes. The fungal isolates parasitizing different nematodes are genetically distinct. To understand their intraspecific genetic differentiation, parasitic mechanisms, and adaptive evolution, we assembled seven putative chrom...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-19169-5

    authors: Lin R,Qin F,Shen B,Shi Q,Liu C,Zhang X,Jiao Y,Lu J,Gao Y,Suarez-Fernandez M,Lopez-Moya F,Lopez-Llorca LV,Wang G,Mao Z,Ling J,Yang Y,Cheng X,Xie B

    更新日期:2018-01-18 00:00:00

  • Age-different extent of resection for clinical IA non-small cell lung cancer: analysis of nodal metastasis.

    abstract::Whether age has any impact on the risk of lymph node (LN) metastasis in patients with early-stage non-small cell lung cancer (NSCLC) remains controversial. Therefore, we aimed to objectively compare the risk of LN metastasis between elderly and young patients so as to justify for age-different extent of surgical resec...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-66509-5

    authors: Deng HY,Zhou J,Wang RL,Jiang R,Qiu XM,Zhu DX,Tang XJ,Zhou Q

    更新日期:2020-06-12 00:00:00

  • Generation of westerly wind bursts by forcing outside the tropics.

    abstract::The westerly wind burst (WWB) is an important triggering mechanism of El Niño and typically occurs in the western Pacific Ocean. The Fourier spectrum of the wind field over the western tropical Pacific is characterised by a large variety of peaks distributed from intra-seasonal to decadal time scales, suggesting that ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-79655-7

    authors: Sullivan A,Zhong W,Borzelli GLE,Geng T,Mackallah C,Ng B,Hong CC,Cai W,Huang AY,Bodman R

    更新日期:2021-01-13 00:00:00

  • Immunization with DNA prime-subunit protein boost strategy based on influenza H9N2 virus conserved matrix protein M1 and its epitope screening.

    abstract::Developing an effective universal influenza vaccine against influenza virus with highly conserved antigenic epitopes could induce a broad-spectrum immune response to prevent infection. The soluble protein M1 that can induce the M1 specific immune response was first confirmed in our previous study. In this study, we ch...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-60783-z

    authors: Liu F,Wang X,Zheng M,Xiong F,Liu X,Zhou L,Tan W,Chen Z

    更新日期:2020-03-05 00:00:00

  • New Immunosuppressive Sphingoid Base and Ceramide Analogues in Wild Cordyceps.

    abstract::A comprehensive identification of sphingoid bases and ceramides in wild Cordyceps was performed by integrating a sequential chromatographic enrichment procedure and an UHPLC-ultrahigh definition-Q-TOF-MS based sphingolipidomic approach. A total of 43 sphingoid bases and 303 ceramides were identified from wild Cordycep...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep38641

    authors: Mi JN,Han Y,Xu Y,Kou J,Wang JR,Jiang ZH

    更新日期:2016-12-14 00:00:00

  • New structural insight of C-terminal region of Syntenin-1, enhancing the molecular dimerization and inhibitory function related on Syndecan-4 signaling.

    abstract::The PDZ domain-containing scaffold protein, syntenin-1, binds to the transmembrane proteoglycan, syndecan-4, but the molecular mechanism/function of this interaction are unknown. Crystal structure analysis of syntenin-1/syndecan-4 cytoplasmic domains revealed that syntenin-1 forms a symmetrical pair of dimers anchored...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep36818

    authors: Choi Y,Yun JH,Yoo J,Lee I,Kim H,Son HN,Kim IS,Yoon HS,Zimmermann P,Couchman JR,Cho HS,Oh ES,Lee W

    更新日期:2016-11-10 00:00:00

  • The bacterial DNA repair protein Mfd confers resistance to the host nitrogen immune response.

    abstract::Production of reactive nitrogen species (NO) is a key step in the immune response following infections. NO induces lesions to bacterial DNA, thus limiting bacterial growth within hosts. Using two pathogenic bacteria, Bacillus cereus and Shigella flexneri, we show that the DNA-repair protein Mfd (Mutation-Frequency-Dec...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep29349

    authors: Guillemet E,Leréec A,Tran SL,Royer C,Barbosa I,Sansonetti P,Lereclus D,Ramarao N

    更新日期:2016-07-20 00:00:00

  • Exosome surface glycans reflect osteogenic differentiation of mesenchymal stem cells: Profiling by an evanescent field fluorescence-assisted lectin array system.

    abstract::Extracellular vesicles (EVs) carry information between cells in the form of biomolecules. Such molecules have been found to serve as biomarkers. Glycans attached to surface molecules on EVs are involved in their cellular uptake. In this study, we examined glycan profiles of small EVs which are generally termed exosome...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-47760-x

    authors: Shimoda A,Sawada SI,Sasaki Y,Akiyoshi K

    更新日期:2019-08-08 00:00:00

  • Identification of Genes Associated with Smad3-dependent Renal Injury by RNA-seq-based Transcriptome Analysis.

    abstract::Transforming growth factor-β/Smad3 signaling plays a critical role in the process of chronic kidney disease (CKD), but targeting Smad3 systematically may cause autoimmune disease by impairing immunity. In this study, we used whole-transcriptome RNA-sequencing to identify the differential gene expression profile, gene ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep17901

    authors: Zhou Q,Xiong Y,Huang XR,Tang P,Yu X,Lan HY

    更新日期:2015-12-09 00:00:00

  • A putative chordate luciferase from a cosmopolitan tunicate indicates convergent bioluminescence evolution across phyla.

    abstract::Pyrosomes are tunicates in the phylum Chordata, which also contains vertebrates. Their gigantic blooms play important ecological and biogeochemical roles in oceans. Pyrosoma, meaning "fire-body", derives from their brilliant bioluminescence. The biochemistry of this light production is unknown, but has been hypothesiz...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-73446-w

    authors: Tessler M,Gaffney JP,Oliveira AG,Guarnaccia A,Dobi KC,Gujarati NA,Galbraith M,Mirza JD,Sparks JS,Pieribone VA,Wood RJ,Gruber DF

    更新日期:2020-10-20 00:00:00

  • A Rapid Method for Label-Free Enrichment of Rare Trophoblast Cells from Cervical Samples.

    abstract::Extravillous trophoblasts (EVTs) have the potential to provide the entire fetal genome for prenatal testing. Previous studies have demonstrated the presence of EVTs in the cervical canal and the ability to retrieve a small quantity of these cells by cervical sampling. However, these small quantities of trophoblasts ar...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-48346-3

    authors: Bailey-Hytholt CM,Sayeed S,Kraus M,Joseph R,Shukla A,Tripathi A

    更新日期:2019-08-20 00:00:00

  • Author Correction: Diversity of gut microflora is required for the generation of B cell with regulatory properties in a skin graft model.

    abstract::An amendment to this paper has been published and can be accessed via a link at the top of the paper. ...

    journal_title:Scientific reports

    pub_type: 已发布勘误

    doi:10.1038/s41598-020-62381-5

    authors: Alhabbab R,Blair P,Elgueta R,Stolarczyk E,Marks E,Becker PD,Ratnasothy K,Smyth L,Safinia N,Sharif-Paghaleh E,O'Connell S,Noelle RJ,Lord GM,Howard JK,Spencer J,Lechler RI,Lombardi G

    更新日期:2020-04-06 00:00:00

  • Highly efficient and robust cathode materials for low-temperature solid oxide fuel cells: PrBa0.5Sr0.5Co(2-x)Fe(x)O(5+δ).

    abstract::Solid oxide fuel cells (SOFC) are the cleanest, most efficient, and cost-effective option for direct conversion to electricity of a wide variety of fuels. While significant progress has been made in anode materials with enhanced tolerance to coking and contaminant poisoning, cathodic polarization still contributes con...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep02426

    authors: Choi S,Yoo S,Kim J,Park S,Jun A,Sengodan S,Kim J,Shin J,Jeong HY,Choi Y,Kim G,Liu M

    更新日期:2013-01-01 00:00:00

  • Optogenetic and chemogenetic strategies for sustained inhibition of pain.

    abstract::Spatially targeted, genetically-specific strategies for sustained inhibition of nociceptors may help transform pain science and clinical management. Previous optogenetic strategies to inhibit pain have required constant illumination, and chemogenetic approaches in the periphery have not been shown to inhibit pain. Her...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep30570

    authors: Iyer SM,Vesuna S,Ramakrishnan C,Huynh K,Young S,Berndt A,Lee SY,Gorini CJ,Deisseroth K,Delp SL

    更新日期:2016-08-03 00:00:00

  • Minimal memory for details in real life events.

    abstract::The extent to which the details of past experiences are retained or forgotten remains controversial. Some studies suggest massive storage while others describe memories as fallible summary recreations of original events. The discrepancy can be ascribed to the content of memories and how memories are evaluated. Many st...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-33792-2

    authors: Misra P,Marconi A,Peterson M,Kreiman G

    更新日期:2018-11-12 00:00:00

  • Elucidation of microstructural changes in leaves during senescence using spectral domain optical coherence tomography.

    abstract::Leaf senescence provides a unique window to explore the age-dependent programmed degradation at organ label in plants. Here, spectral domain optical coherence tomography (SD-OCT) has been used to study in vivo senescing leaf microstructural changes in the deciduous plant Acer serrulatum Hayata. Hayata leaves show autu...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-38165-3

    authors: Anna T,Chakraborty S,Cheng CY,Srivastava V,Chiou A,Kuo WC

    更新日期:2019-02-04 00:00:00

  • The prognostic values of CYP2B6 genetic polymorphisms and metastatic sites for advanced breast cancer patients treated with docetaxel and thiotepa.

    abstract::This study investigated interactive effects of CYP2B6 genotypes and liver metastasis on the prognosis of metastatic breast cancer patients who received combined chemotherapy of docetaxel and thiotepa. Totally 153 patients were retrospectively genotyped rs8192719 (c.1294 + 53C > T) and rs2279343 (c.785A > G). Kaplan-Me...

    journal_title:Scientific reports

    pub_type: 临床试验,杂志文章

    doi:10.1038/srep16775

    authors: Song Q,Zhou X,Yu J,Dong N,Wang X,Yang H,Ren J,Lyerly HK

    更新日期:2015-11-25 00:00:00

  • Maintaining physical activity during refeeding improves body composition, intestinal hyperpermeability and behavior in anorectic mice.

    abstract::A role of gut-brain axis emerges in the pathophysiology of anorexia nervosa and maintaining adapted physical activity during refeeding remains discussed. We aimed to assess gastrointestinal protein metabolism and investigate the contribution of physical activity during refeeding in C57BL/6 mice with activity-based ano...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep21887

    authors: Achamrah N,Nobis S,Breton J,Jésus P,Belmonte L,Maurer B,Legrand R,Bôle-Feysot C,do Rego JL,Goichon A,Rego JC,Déchelotte P,Fetissov SO,Claeyssens S,Coëffier M

    更新日期:2016-02-24 00:00:00

  • Dopaminergic neurons regenerate following chemogenetic ablation in the olfactory bulb of adult Zebrafish (Danio rerio).

    abstract::Adult zebrafish have the ability to regenerate cells of the central nervous system. However, few neuronal regeneration studies in adult zebrafish addressed their ability to regenerate specific types of neurons following cell specific ablation. We show here that treatment of transgenic Tg(dat:CFP-NTR) adult zebrafish w...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-69734-0

    authors: Godoy R,Hua K,Kalyn M,Cusson VM,Anisman H,Ekker M

    更新日期:2020-07-30 00:00:00

  • Near-instant automatic access to visually presented words in the human neocortex: neuromagnetic evidence.

    abstract::Rapid and efficient processing of external information by the brain is vital to survival in a highly dynamic environment. The key channel humans use to exchange information is language, but the neural underpinnings of its processing are still not fully understood. We investigated the spatio-temporal dynamics of neural...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep26558

    authors: Shtyrov Y,MacGregor LJ

    更新日期:2016-05-24 00:00:00

  • Dcc Mediates Functional Assembly of Peripheral Auditory Circuits.

    abstract::Proper structural organization of spiral ganglion (SG) innervation is crucial for normal hearing function. However, molecular mechanisms underlying the developmental formation of this precise organization remain not well understood. Here, we report in the developing mouse cochlea that deleted in colorectal cancer (Dcc...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep23799

    authors: Kim YJ,Wang SZ,Tymanskyj S,Ma L,Tao HW,Zhang LI

    更新日期:2016-04-04 00:00:00

  • Spin-dependent manipulating of vector beams by tailoring polarization.

    abstract::We examine the spin-dependent manipulating of vector beams by tailoring the inhomogeneous polarization. The spin-dependent manipulating is attributed to the spin-dependent phase gradient in vector beams, which can be regarded as the intrinsic feature of inhomogeneous polarization. The desired polarization can be obtai...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep34276

    authors: Zhou J,Zhang W,Liu Y,Ke Y,Liu Y,Luo H,Wen S

    更新日期:2016-09-28 00:00:00

  • Solid-state 31P and 1H chemical MR micro-imaging of hard tissues and biomaterials with magic angle spinning at very high magnetic field.

    abstract::In this work, we show that it is possible to overcome the limitations of solid-state MRI for rigid tissues due to large line broadening and short dephasing times by combining Magic Angle Spinning (MAS) with rotating pulsed field gradients. This allows recording ex vivo 31P 3D and 2D slice-selected images of rigid tiss...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-08458-0

    authors: Yon M,Sarou-Kanian V,Scheler U,Bouler JM,Bujoli B,Massiot D,Fayon F

    更新日期:2017-08-15 00:00:00

  • Influence of deposition rate on the structural properties of plasma-enhanced CVD epitaxial silicon.

    abstract::Solar cells based on epitaxial silicon layers as the absorber attract increasing attention because of the potential cost reduction. In this work, we studied the influence of the deposition rate on the structural properties of epitaxial silicon layers produced by plasma-enhanced chemical vapor deposition (epi-PECVD) us...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep43968

    authors: Chen W,Cariou R,Hamon G,Léal R,Maurice JL,Cabarrocas PR

    更新日期:2017-03-06 00:00:00

  • Potential landscape of high dimensional nonlinear stochastic dynamics with large noise.

    abstract::Quantifying stochastic processes is essential to understand many natural phenomena, particularly in biology, including the cell-fate decision in developmental processes as well as the genesis and progression of cancers. While various attempts have been made to construct potential landscape in high dimensional systems ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-15889-2

    authors: Tang Y,Yuan R,Wang G,Zhu X,Ao P

    更新日期:2017-11-17 00:00:00

  • Oligonucleotide conjugated multi-functional adeno-associated viruses.

    abstract::Recombinant adeno-associated viruses (AAVs) are among the most commonly used vehicles for in vivo gene delivery. However, their tropism is limited, and additionally their efficacy can be negatively affected by prevalence of neutralizing antibodies in sera. Methodologies to systematically engineer AAV capsid properties...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-21742-x

    authors: Katrekar D,Moreno AM,Chen G,Worlikar A,Mali P

    更新日期:2018-02-26 00:00:00