Abstract:
:Using a free boundary approach based on an analogy with ice melting models, we propose a deterministic PDE framework to describe the dynamics of fitness distributions in the presence of beneficial mutations with non-epistatic effects on fitness. Contrarily to most approaches based on deterministic models, our framework does not rely on an infinite population size assumption, and successfully captures the transient as well as the long time dynamics of fitness distributions. In particular, consistently with stochastic individual-based approaches or stochastic PDE approaches, it leads to a constant asymptotic rate of adaptation at large times, that most deterministic approaches failed to describe. We derive analytic formulas for the asymptotic rate of adaptation and the full asymptotic distribution of fitness. These formulas depend explicitly on the population size, and are shown to be accurate for a wide range of population sizes and mutation rates, compared to individual-based simulations. Although we were not able to derive an analytic description for the transient dynamics, numerical computations lead to accurate predictions and are computationally efficient compared to stochastic simulations. These computations show that the fitness distribution converges towards a travelling wave with constant speed, and whose profile can be computed analytically.
journal_name
Sci Repjournal_title
Scientific reportsauthors
Roques L,Garnier J,Martin Gdoi
10.1038/s41598-017-17212-5subject
Has Abstractpub_date
2017-12-19 00:00:00pages
17838issue
1issn
2045-2322pii
10.1038/s41598-017-17212-5journal_volume
7pub_type
杂志文章abstract::The dominant seagrass in Port Phillip Bay (PPB), Australia, Zostera nigricaulis, declined between 2000 and 2011, coinciding with the 'Millennium drought' that ended in 2009. These seagrasses are nitrogen-limited, underpinning the need to develop nitrogen budgets for better ecosystem management. Environmentally realist...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-018-35549-3
更新日期:2018-11-21 00:00:00
abstract::Studies have assessed individual components of a western diet, but no study has assessed the long-term, cumulative effects of a western diet on aging and Alzheimer's disease (AD). Therefore, we have formulated the first western-style diet that mimics the fat, carbohydrate, protein, vitamin and mineral levels of wester...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep21568
更新日期:2016-02-18 00:00:00
abstract::The effect of substrate surface roughening on the capacitance of Ni(OH)2/NiOOH nanowall array samples produced via chemical bath deposition for 2, 4, 6, 24 and 48 h on an as-received stainless steel substrate and the same substrate after sandblasting has been investigated. Symmetric cells were subjected to 120,000 cha...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-019-53365-1
更新日期:2019-11-14 00:00:00
abstract::Glioma is the most common primary intracranial tumor and is associated with very low survival rates. The development of reliable biomarkers can help to elucidate the molecular mechanisms involved in glioma development. Here the expression of ABCC8 mRNA, clinical characteristics, and survival information based on 1893 ...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-020-69676-7
更新日期:2020-07-29 00:00:00
abstract::Silver nanowires have attracted much attention for use in flexible transparent conductive films (TCFs) due to their low sheet resistance and flexibility. However, the haze was too high for replacing indium-tin-oxide in high-quality display devices. Herein, we report flexible TCFs, which were prepared using a scalable ...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep16371
更新日期:2015-11-17 00:00:00
abstract::Extracellular vesicles (EVs) carry information between cells in the form of biomolecules. Such molecules have been found to serve as biomarkers. Glycans attached to surface molecules on EVs are involved in their cellular uptake. In this study, we examined glycan profiles of small EVs which are generally termed exosome...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-019-47760-x
更新日期:2019-08-08 00:00:00
abstract::Successful establishment of invasive species is often related to the existence of vacant niches. Competition occurs when invaders use the same limiting resources as members of the recipient community, which will be reflected in some overlap of their trophic niches. The concept of isotopic niche has been used to study ...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep09715
更新日期:2015-05-19 00:00:00
abstract::Although 3,5,3'-triiodothyronine (T3) is considered to be the primary bioactive thyroid hormone (TH) due to its high affinity for TH nuclear receptors (TRs), new data suggest that 3,5-diiodothyronine (T2) can also regulate transcriptional networks. To determine the functional relevance of these bioactive THs, RNA-seq ...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-017-14913-9
更新日期:2017-11-08 00:00:00
abstract::We report the results of a game-theoretic experiment with human players who solve problems of increasing complexity by cooperating in groups of increasing size. Our experimental environment is set up to make it complicated for players to use rational calculation for making the cooperative decisions. This environment i...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-019-41773-2
更新日期:2019-04-02 00:00:00
abstract::Trichoderma spp colonizes the plant rhizosphere and provides pathogen resistance, abiotic stress tolerance, and enhance growth and development. We evaluated the Arabidopsis-Trichoderma interaction using a split system in which Trichoderma atroviride and Trichoderma virens were grown on PDA or MS medium. Arabidopsis gr...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-018-34500-w
更新日期:2018-11-06 00:00:00
abstract::In eusocial Hymenoptera (ants, bees and wasps), queen and worker adult castes typically arise via environmental influences. A fundamental challenge is to understand how a single genome can thereby produce alternative phenotypes. A powerful approach is to compare the molecular basis of caste determination and different...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep45674
更新日期:2017-03-31 00:00:00
abstract::Chemotherapy (CTx)-induced premature ovarian failure (POF) in woman remains clinically irreversible. Amniotic fluid stem cells (AFSCs) have shown the potential to treat CTx-induced POF; however, the underlying mechanism is unclear. Here we demonstrate that AFSC-derived exosomes recapitulate the anti-apoptotic effect o...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep23120
更新日期:2016-03-16 00:00:00
abstract::The Pregnane X Receptor (PXR) is a ligand-activated transcription factor belonging to the nuclear receptor family. PXR can bind diverse drugs and environmental toxicants with different binding modes, making it an intriguing target for drug discovery. Here we investigated the binding mechanism of the SR12813 ligand to ...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-018-34373-z
更新日期:2018-11-01 00:00:00
abstract::An amendment to this paper has been published and can be accessed via a link at the top of the paper. ...
journal_title:Scientific reports
pub_type: 已发布勘误
doi:10.1038/s41598-020-62742-0
更新日期:2020-04-10 00:00:00
abstract::Pre-clinical monitoring of tumor growth and identification of distal metastasis requires a balance between accuracy and expediency. Bioluminescence imaging (BLI) is often used to track tumor growth but is primarily limited to planar 2-dimensional (2D) imaging. Consistent subject placement within a standard top-mounted...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-018-21668-4
更新日期:2018-02-20 00:00:00
abstract::This paper addresses the issue of the sorption process on coal concerning propylene released from the source of coal heating in the deposit. In this study, the interaction between Polish coals and propylene molecules, as well as three other hydrocarbons (ethylene, ethane, and propane) with the application of a fixed-b...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-020-67472-x
更新日期:2020-07-09 00:00:00
abstract::The 37 currently recognized Bemisia tabaci cryptic species are economically important species and contain both primary and secondary endosymbionts, but their diversity has never been mapped systematically across the group. To achieve this, PacBio sequencing of full-length bacterial 16S rRNA gene amplicons was carried ...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-019-42793-8
更新日期:2019-04-25 00:00:00
abstract::Greenhouse and field studies were conducted to provide a reference for pre-emergence (PRE) application of isoxaflutole on maize in China. In greenhouse study, the isoxaflutole PRE application at 30 g active ingredient (a.i.) ha-1 could effectively control large numbers of weeds, especially some large-seeded broadleave...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-017-12696-7
更新日期:2017-10-04 00:00:00
abstract::The Fenton-like activity of nanoceria has attracted intensive attention for wastewater treatment in recent years. During the Fenton-like reaction, the adsorption of organic pollutants on catalyst surface plays a key role in their degradation. In this work, the adsorption-degradation of methylene blue (MB) and Congo re...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-018-36794-2
更新日期:2019-03-21 00:00:00
abstract::The influence of the growth conditions of multilayer CdTe/ZnTe quantum dots (QDs) on Si substrate upon their carrier dynamics is studied using intensity integration and broadening photoluminescence. The unusual temperature dependence of the line broadening is explained using a model for interband transitions that invo...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep08267
更新日期:2015-02-05 00:00:00
abstract::People with normal hearing thresholds can nonetheless have difficulty with understanding speech in noisy backgrounds. The origins of such supra-threshold hearing deficits remain largely unclear. Previously we showed that the auditory brainstem response to running speech is modulated by selective attention, evidencing ...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-019-50773-1
更新日期:2019-10-01 00:00:00
abstract::Hybridization between heterospecific individuals has been documented as playing a direct role in promoting paternal leakage and mitochondrial heteroplasmy in both natural populations and laboratory conditions, by relaxing the egg-sperm recognition mechanisms. Here, we tested the hypothesis that hybridization can lead ...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-019-55764-w
更新日期:2019-12-16 00:00:00
abstract::Plasmonics has established itself as a branch of physics which promises to revolutionize data processing, improve photovoltaics, and increase sensitivity of bio-detection. A widespread use of plasmonic devices is notably hindered by high losses and the absence of stable and inexpensive metal films suitable for plasmon...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep05517
更新日期:2014-07-01 00:00:00
abstract::This corrects the article DOI: 10.1038/srep30212. ...
journal_title:Scientific reports
pub_type: 杂志文章,已发布勘误
doi:10.1038/srep46831
更新日期:2017-05-26 00:00:00
abstract::An amendment to this paper has been published and can be accessed via a link at the top of the paper. ...
journal_title:Scientific reports
pub_type: 已发布勘误
doi:10.1038/s41598-020-63873-0
更新日期:2020-04-17 00:00:00
abstract::We formerly developed an automatic colony count system based on the time-lapse shadow image analysis (TSIA). Here this system has been upgraded and applied to practical rapid decision. A microbial sample was spread on/in an agar plate with 90 mm in diameter as homogeneously as possible. We could obtain the results wit...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep10061
更新日期:2015-05-15 00:00:00
abstract::Irreversible electroporation (IRE) is an emerging focal therapy which is demonstrating utility in the treatment of unresectable tumors where thermal ablation techniques are contraindicated. IRE uses ultra-short duration, high-intensity monopolar pulsed electric fields to permanently disrupt cell membranes within a wel...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep14999
更新日期:2015-10-13 00:00:00
abstract::The present study investigated the treatment and survival outcomes of patients with synchronous primary esophageal squamous cell carcinoma and gastric adenocarcinoma. The medical records of 10,783 patients with primary esophageal squamous cancer treated at our institution between 1995 and 2012 were retrospectively rev...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep13335
更新日期:2015-08-20 00:00:00
abstract::AS1411 is a G-rich DNA oligonucleotide that functions as an aptamer of the protein nucleolin, found at high levels on the surface of cancer cells but not on the surface of normal cells. Herein, we have studied AS1411 as a supramolecular carrier for the delivery of an acridine-based G-quadruplex ligand, C8, to HeLa can...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-019-44388-9
更新日期:2019-05-28 00:00:00
abstract::Silver (Ag) is one of the seven metals of antiquity and an important engineering material in the electronic, medical, and chemical industries because of its unique noble and catalytic properties. Ag thin films are extensively used in modern electronics primarily because of their oxidation-resistance. Here we report a ...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep34769
更新日期:2016-10-05 00:00:00