A highly efficient method for extracting next-generation sequencing quality RNA from adipose tissue of recalcitrant animal species.

Abstract:

:The next-generation sequencing (NGS) based RNA sequencing (RNA-Seq) and transcriptome profiling offers an opportunity to unveil complex biological processes. Successful RNA-Seq and transcriptome profiling requires a large amount of high-quality RNA. However, NGS-quality RNA isolation is extremely difficult from recalcitrant adipose tissue (AT) with high lipid content and low cell numbers. Further, the amount and biochemical composition of AT lipid varies depending upon the animal species which can pose different degree of resistance to RNA extraction. Currently available approaches may work effectively in one species but can be almost unproductive in another species. Herein, we report a two step protocol for the extraction of NGS quality RNA from AT across a broad range of animal species.

journal_name

J Cell Physiol

authors

Sharma D,Golla N,Singh D,Onteru SK

doi

10.1002/jcp.25951

subject

Has Abstract

pub_date

2018-03-01 00:00:00

pages

1971-1974

issue

3

eissn

0021-9541

issn

1097-4652

journal_volume

233

pub_type

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