Nucleotide-sequence-specific de novo methylation in a somatic murine cell line.

abstract：:The cochlear implant (CI) is a neuroprosthesis that allows profoundly deaf patients to recover speech intelligibility. This recovery goes through long-term adaptative processes to build coherent percepts from the coarse information delivered by the implant. Here we analyzed the longitudinal postimplantation evolution ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Rouger J,Lagleyre S,Fraysse B,Deneve S,Deguine O,Barone P

更新日期：2007-04-24 00:00:00

abstract：:Pancreatic cancer is one of the most deadly cancers affecting the Western world. Because the disease is highly metastatic and difficult to diagnosis until late stages, the 5-y survival rate is around 5%. The identification of molecular cancer drivers is critical for furthering our understanding of the disease and deve...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Mann KM,Ward JM,Yew CC,Kovochich A,Dawson DW,Black MA,Brett BT,Sheetz TE,Dupuy AJ,Australian Pancreatic Cancer Genome Initiative.,Chang DK,Biankin AV,Waddell N,Kassahn KS,Grimmond SM,Rust AG,Adams DJ,Jenkins NA,Copela

更新日期：2012-04-17 00:00:00

abstract：:Cyclin E is an important regulator of cell cycle progression that together with cyclin-dependent kinase (cdk) 2 is crucial for the G1/S transition during the mammalian cell cycle. Previously, we showed that severe overexpression of cyclin E protein in tumor cells and tissues results in the appearance of lower molecula...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Gray-Bablin J,Zalvide J,Fox MP,Knickerbocker CJ,DeCaprio JA,Keyomarsi K

更新日期：1996-12-24 00:00:00

abstract：:To probe the structure of the gamma heavy chain of membrane IgG and the mRNA and gene segments that encode it, we have analyzed cDNA clones derived from a gamma 1 membrane RNA of B lymphoma 2PK-3. The nucleotide sequence of the clones indicated that membrane gamma 1 chains bear a COOH-terminal 71-residue segment that ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Tyler BM,Cowman AF,Gerondakis SD,Adams JM,Bernard O

更新日期：1982-03-01 00:00:00

abstract：:The functional significance of the portal vascular link between the beta cells of the pancreatic islets and the liver has not been established. Previous studies indicated that insulin does not acutely regulate glucose metabolism by a direct hepatic effect. More recent observations suggest that the role of insulin in r...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Griffen SC,Russell SM,Katz LS,Nicoll CS

更新日期：1987-10-01 00:00:00

abstract：:Purified inside-out vesicles from human erythrocytes were used to investigate the active transport of oxidized glutathione (GSSG). Incubation of vesicles and GSSG in the presence of ATP resulted in the transport of GSSG into the vesicles. When vesicles were incubated with reduced glutathione (GSH), no transport was ob...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kondo T,Dale GL,Beutler E

更新日期：1980-11-01 00:00:00

abstract：:Myelin basic proteins (MBP) are major constituents of the myelin sheath of oligodendrocytes and Schwann cells in the central nervous system and the peripheral nervous system, respectively. We previously showed that MBP-related transcripts are present in the bone marrow and the immune system. These mRNAs are transcribe...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Marty MC,Alliot F,Rutin J,Fritz R,Trisler D,Pessac B

更新日期：2002-06-25 00:00:00

abstract：:Restriction factors are effectors of the innate immune response to viral pathogens that inhibit viral replication by operating as molecular barriers to steps of the viral life cycle. The restriction factor SAMHD1 blocks lentiviral reverse transcription in myeloid cells and resting CD4+ T cells. Many lineages of lentiv...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Spragg CJ,Emerman M

更新日期：2013-12-24 00:00:00

abstract：:The avian neuroretina (NR) is part of the central nervous system and is composed of photoreceptors, neuronal cells, and Müller (glial) cells. These cells are derived from proliferating neuroectodermal precursors that differentiate after terminal mitosis and become organized in cell strata. Genes that are specifically ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Guermah M,Crisanti P,Laugier D,Dezelee P,Bidou L,Pessac B,Calothy G

更新日期：1991-05-15 00:00:00

abstract：:The properties of glycine receptors (GlyRs) from newborn and adult rat spinal cord were studied in Xenopus oocytes injected with whole mRNA or the heavy (H) or light (L) mRNA fractions encoding their respective GlyRs. Mean open times and conductances of channels gated by H- or L-GlyRs were determined by noise analysis...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Morales A,Nguyen QT,Miledi R

更新日期：1994-04-12 00:00:00

abstract：:Ovine pulmonary surfactant is bactericidal for Pasteurella haemolytica when surfactant and bacteria mixtures are incubated with normal ovine serum. To isolate this component, surfactant (1 mg/ml) was centrifuged at 100,000 x gav, and the supernatant was fractionated by HPLC. Fractions were eluted with acetonitrile (10...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Brogden KA,De Lucca AJ,Bland J,Elliott S

更新日期：1996-01-09 00:00:00

abstract：:The O(2) reduction site of cytochrome c oxidase (CcO), comprising iron (Fe(a3)) and copper (Cu(B)) ions, is probed by x-ray structural analyses of CO, NO, and CN(-) derivatives to investigate the mechanism of the complete reduction of O(2). Formation of the derivative contributes to the trigonal planar coordination of...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Muramoto K,Ohta K,Shinzawa-Itoh K,Kanda K,Taniguchi M,Nabekura H,Yamashita E,Tsukihara T,Yoshikawa S

更新日期：2010-04-27 00:00:00

abstract：:The BvgAS phosphorelay regulates ∼10% of the annotated genomes of Bordetella pertussis and Bordetella bronchiseptica and controls their infectious cycles. The hierarchical organization of the regulatory network allows the integration of contextual signals to control all or specific subsets of BvgAS-regulated genes. He...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Ahuja U,Shokeen B,Cheng N,Cho Y,Blum C,Coppola G,Miller JF

更新日期：2016-03-01 00:00:00

abstract：:Complex gene regulatory circuits contain many interacting components. In principle, all of these components and interactions may be essential to the function of the circuit. Alternatively, some of them may be refinements to a simpler version of the circuit that improve its fitness. In this work, we have tested whether...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Babić AC,Little JW

更新日期：2007-11-06 00:00:00

abstract：:New neurons are generated in adult mammalians and may contribute to repairing the brain after injury. Here, we show that the number of new neurons in the dentate gyrus of adult rats increased in cerebral ischemic stroke and correlated with activation of the cAMP-response-element-binding protein (CREB). Inhibition of e...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Zhu DY,Lau L,Liu SH,Wei JS,Lu YM

更新日期：2004-06-22 00:00:00

abstract：:The cytoplasmic Myc protein (c-Myc) regulates various human genes and is dysregulated in many human cancers. Phosphorylation mediates the protein activation of c-Myc and is essential for the function of this transcription factor in normal cell behavior and tumor growth. To date, however, the targeting of Myc as a ther...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Fan-Minogue H,Cao Z,Paulmurugan R,Chan CT,Massoud TF,Felsher DW,Gambhir SS

更新日期：2010-09-07 00:00:00

abstract：:High-valent intermediates of binuclear nonheme iron enzymes are structurally unknown despite their importance for understanding enzyme reactivity. Nuclear resonance vibrational spectroscopy combined with density functional theory calculations has been applied to structurally well-characterized high-valent mono- and di...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Park K,Bell CB 3rd,Liu LV,Wang D,Xue G,Kwak Y,Wong SD,Light KM,Zhao J,Alp EE,Yoda Y,Saito M,Kobayashi Y,Ohta T,Seto M,Que L Jr,Solomon EI

更新日期：2013-04-16 00:00:00

abstract：:Mutations in the dystrophin gene cause Duchenne muscular dystrophy (DMD) most commonly through loss of protein expression. In a small subpopulation of patients, missense mutations can cause DMD, Becker muscular dystrophy, or X-linked cardiomyopathy. Nearly one-half of disease-causing missense mutations are located in ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Henderson DM,Lee A,Ervasti JM

更新日期：2010-05-25 00:00:00

abstract：:Encoding ribonuclease H1 (RNase H1) degrades RNA hybridized to DNA, and its function is essential for mitochondrial DNA maintenance in the developing mouse. Here we define the role of RNase H1 in mitochondrial DNA replication. Analysis of replicating mitochondrial DNA in embryonic fibroblasts lacking RNase H1 reveals ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Holmes JB,Akman G,Wood SR,Sakhuja K,Cerritelli SM,Moss C,Bowmaker MR,Jacobs HT,Crouch RJ,Holt IJ

更新日期：2015-07-28 00:00:00

abstract：:Recent experiments have shown that mouse primary visual cortex (V1) is very different from that of cat or monkey, including response properties-one of which is that contrast invariance in the orientation selectivity (OS) of the neurons' firing rates is replaced in mouse with contrast-dependent sharpening (broadening) ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Dai WP,Zhou D,McLaughlin DW,Cai D

更新日期：2018-11-06 00:00:00

abstract：:Resequencing or reference-based assemblies reveal large parts of the small-scale sequence variation. However, they typically fail to separate such local variation into colinear and rearranged variation, because they usually do not recover the complement of large-scale rearrangements, including transpositions and inver...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Zapata L,Ding J,Willing EM,Hartwig B,Bezdan D,Jiao WB,Patel V,Velikkakam James G,Koornneef M,Ossowski S,Schneeberger K

更新日期：2016-07-12 00:00:00

abstract：:A single, modified nucleoside in Escherichia coli tRNA, 6-(3-methyl-2-butenylamino)-2-methyl-thio-9-beta-D-ribofuranosylpurine, has been desulfurized with Raney nickel to afford its probable biosynthetic precursor. The limitations of the reaction at the nucleoside and tRNA levels and its lack of inhibition of the amin...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Hecht SM,Kirkegaard LH,Bock RM

更新日期：1971-01-01 00:00:00

abstract：:Cortical networks that have been found to operate close to a critical point exhibit joint activations of large numbers of neurons. However, in motor cortex of the awake macaque monkey, we observe very different dynamics: massively parallel recordings of 155 single-neuron spiking activities show weak fluctuations on th...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Dahmen D,Grün S,Diesmann M,Helias M

更新日期：2019-06-25 00:00:00

abstract：:A dynamical theory for the evolution of the genetic code is presented, which accounts for its universality and optimality. The central concept is that a variety of collective, but non-Darwinian, mechanisms likely to be present in early communal life generically lead to refinement and selection of innovation-sharing pr...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Vetsigian K,Woese C,Goldenfeld N

更新日期：2006-07-11 00:00:00

abstract：:A method to identify 5-methylcytosine (m5Cyt) in DNA immobilized on nitrocellulose paper by using antibody against m5Cyt raised in rabbits is described. Immobilized restriction fragments of DNA are incubated first with purified antibody against m5Cyt and then with goat anti-rabbit IgG labeled with 125I. Restriction fr...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Sano H,Royer HD,Sager R

更新日期：1980-06-01 00:00:00

abstract：:The distribution of oriented, polymerized sickle cell hemoglobin (hemoglobin S) in erythrocytes is visualized with a microscope that produces an image proportional to linear dichroism. Monochromatic light alternately polarized along two perpendicular directions is incident on the sample. The image is focused on a diod...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Mickols W,Maestre MF,Tinoco I Jr,Embury SH

更新日期：1985-10-01 00:00:00

abstract：:In the presence of a single-stranded-DNA-binding protein (SSB), the elongation of primed DNA templates by DNA polymerase delta (pol delta) is dependent on ATP and two protein factors, activator 1 (A1) and proliferating cell nuclear antigen (PCNA). We have examined the interaction of these proteins with (dA)4500.(dT)12...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Lee SH,Hurwitz J

更新日期：1990-08-01 00:00:00

abstract：:Cytosine methylation is an epigenetic mark that promotes gene silencing and plays important roles in development and genome defense against transposons. Methylation patterns are established and maintained by DNA methyltransferases that catalyze transfer of a methyl group from S-adenosyl-L-methionine to cytosine bases ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Morales-Ruiz T,Ortega-Galisteo AP,Ponferrada-Marín MI,Martínez-Macías MI,Ariza RR,Roldán-Arjona T

更新日期：2006-05-02 00:00:00

abstract：:Visual transduction in Drosophila is a G protein-coupled phospholipase C-mediated process that leads to depolarization via activation of the transient receptor potential (TRP) calcium channel. Inactivation-no-afterpotential D (INAD) is an adaptor protein containing PDZ domains known to interact with TRP. Immunoprecipi...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Shieh BH,Zhu MY,Lee JK,Kelly IM,Bahiraei F

更新日期：1997-11-11 00:00:00

abstract：:Array technologies have made it straightforward to monitor simultaneously the expression pattern of thousands of genes. The challenge now is to interpret such massive data sets. The first step is to extract the fundamental patterns of gene expression inherent in the data. This paper describes the application of self-o...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Tamayo P,Slonim D,Mesirov J,Zhu Q,Kitareewan S,Dmitrovsky E,Lander ES,Golub TR

更新日期：1999-03-16 00:00:00