Engineering Escherichia coli to convert acetic acid to β-caryophyllene.

Abstract:

BACKGROUND:Under aerobic conditions, acetic acid is the major byproduct produced by E. coli during the fermentation. And acetic acid is detrimental to cell growth as it destroys transmembrane pH gradients. Hence, how to reduce the production of acetic acid and how to utilize it as a feedstock are of intriguing interest. In this study, we provided an evidence to produce β-caryophyllene by the engineered E. coli using acetic acid as the only carbon source. RESULTS:Firstly, to construct the robust acetate-utilizing strain, acetyl-CoA synthases from three different sources were introduced and screened in the E. coli. Secondly, to establish the engineered strains converting acetic acid to β-caryophyllene, acetyl-CoA synthase (ACS), β-caryophyllene synthase (QHS1) and geranyl diphosphate synthase (GPPS2) were co-expressed in the E. coli cells. Thirdly, to further enhance β-caryophyllene production from acetic acid, the heterologous MVA pathway was introduced into the cells. What's more, acetoacetyl-CoA synthase (AACS) was also expressed in the cells to increase the precursor acetoacetyl-CoA and accordingly resulted in the increase of β-caryophyllene. The final genetically modified strain, YJM67, could accumulate the production of biomass and β-caryophyllene up to 12.6 and 1.05 g/L during 72 h, respectively, with a specific productivity of 1.15 mg h(-1) g(-1) dry cells, and the conversion efficiency of acetic acid to β-caryophyllene (gram to gram) reached 2.1%. The yield of β-caryophyllene on acetic acid of this strain also reached approximately 5.6% of the theoretical yield. CONCLUSIONS:In the present study, a novel biosynthetic pathway for β-caryophyllene has been investigated by means of conversion of acetic acid to β-caryophyllene using an engineered Escherichia coli. This was the first successful attempt in β-caryophyllene production by E. coli using acetic acid as the only carbon source. Therefore, we have provided a new metabolic engineering tool for β-caryophyllene synthesis.

journal_name

Microb Cell Fact

journal_title

Microbial cell factories

authors

Yang J,Nie Q

doi

10.1186/s12934-016-0475-x

subject

Has Abstract

pub_date

2016-05-05 00:00:00

pages

74

issn

1475-2859

pii

10.1186/s12934-016-0475-x

journal_volume

15

pub_type

杂志文章
  • Increasing cell biomass in Saccharomyces cerevisiae increases recombinant protein yield: the use of a respiratory strain as a microbial cell factory.

    abstract:BACKGROUND:Recombinant protein production is universally employed as a solution to obtain the milligram to gram quantities of a given protein required for applications as diverse as structural genomics and biopharmaceutical manufacture. Yeast is a well-established recombinant host cell for these purposes. In this study...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/1475-2859-9-47

    authors: Ferndahl C,Bonander N,Logez C,Wagner R,Gustafsson L,Larsson C,Hedfalk K,Darby RA,Bill RM

    更新日期:2010-06-17 00:00:00

  • A novel fungal beta-propeller phytase from nematophagous Arthrobotrys oligospora: characterization and potential application in phosphorus and mineral release for feed processing.

    abstract::Phytases are widely utilized in feed industry to increase the utilization of phosphorus, minerals, and amino acids for improvement of animal and human nutrition. At present, all known β-propeller phytases (BPP) have been generated from bacteria, particularly Bacillus. In this work we report for the first time a new fu...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/s12934-020-01346-9

    authors: Hou X,Shen Z,Li N,Kong X,Sheng K,Wang J,Wang Y

    更新日期:2020-04-06 00:00:00

  • Rational selection and engineering of exogenous principal sigma factor (σ(HrdB)) to increase teicoplanin production in an industrial strain of Actinoplanes teichomyceticus.

    abstract:BACKGROUND:Transcriptional engineering has presented a strong ability of phenotypic improvement in microorganisms. However, it could not be directly applied to Actinoplanes teichomyceticus L-27 because of the paucity of endogenous transcription factors in the strain. In this study, exogenous transcription factors were ...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/1475-2859-13-10

    authors: Wang H,Yang L,Wu K,Li G

    更新日期:2014-01-16 00:00:00

  • Genetic manipulation of longevity-related genes as a tool to regulate yeast life span and metabolite production during winemaking.

    abstract:BACKGROUND:Yeast viability and vitality are essential for different industrial processes where the yeast Saccharomyces cerevisiae is used as a biotechnological tool. Therefore, the decline of yeast biological functions during aging may compromise their successful biotechnological use. Life span is controlled by a varie...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/1475-2859-12-1

    authors: Orozco H,Matallana E,Aranda A

    更新日期:2013-01-02 00:00:00

  • Open access to sequence: browsing the Pichia pastoris genome.

    abstract::The first genome sequences of the important yeast protein production host Pichia pastoris have been released into the public domain this spring. In order to provide the scientific community easy and versatile access to the sequence, two web-sites have been installed as a resource for genomic sequence, gene and protein...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/1475-2859-8-53

    authors: Mattanovich D,Callewaert N,Rouzé P,Lin YC,Graf A,Redl A,Tiels P,Gasser B,De Schutter K

    更新日期:2009-10-16 00:00:00

  • Overexpression of artificially fused bifunctional enzyme 4CL1-CCR: a method for production of secreted 4-hydroxycinnamaldehydes in Escherichia coli.

    abstract:BACKGROUND:4-Hydroxycinnamaldehydes are important intermediates in several secondary metabolism pathways, including those involved in the biosynthesis of phenolic acids, flavonoids, terpenoids and monolignols. They are also involved in the biosynthesis and degradation of lignins, which are important limiting factors du...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/s12934-015-0309-2

    authors: Liu S,Qi Q,Chao N,Hou J,Rao G,Xie J,Lu H,Jiang X,Gai Y

    更新日期:2015-08-12 00:00:00

  • Reversed paired-gRNA plasmid cloning strategy for efficient genome editing in Escherichia coli.

    abstract:BACKGROUND:Co-expression of two distinct guide RNAs (gRNAs) has been used to facilitate the application of CRISPR/Cas9 system in fields such as large genomic deletion. The paired gRNAs are often placed adjacently in the same direction and expressed individually by two identical promoters, constituting direct repeats (D...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/s12934-020-01321-4

    authors: Ding T,Huang C,Liang Z,Ma X,Wang N,Huo YX

    更新日期:2020-03-10 00:00:00

  • Sandwich hybridisation assay for quantitative detection of yeast RNAs in crude cell lysates.

    abstract::BACKGROUND: A rapid microtiter plate based sandwich hybridization assay was developed for detection and quantification of single RNA species using magnetic beads. Following solution hybridization target RNA molecules were collected by biotin-streptavidin affinity binding and detected by fluorescence signal generated b...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/1475-2859-2-4

    authors: Rautio J,Barken KB,Lahdenperä J,Breitenstein A,Molin S,Neubauer P

    更新日期:2003-04-28 00:00:00

  • Systems analysis of methylerythritol-phosphate pathway flux in E. coli: insights into the role of oxidative stress and the validity of lycopene as an isoprenoid reporter metabolite.

    abstract:BACKGROUND:High-throughput screening methods assume that the output measured is representative of changes in metabolic flux toward the desired product and is not affected by secondary phenotypes. However, metabolic engineering can result in unintended phenotypes that may go unnoticed in initial screening. The red pigme...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/s12934-015-0381-7

    authors: Bongers M,Chrysanthopoulos PK,Behrendorff JB,Hodson MP,Vickers CE,Nielsen LK

    更新日期:2015-11-26 00:00:00

  • Use and improvement of microbial redox enzymes for environmental purposes.

    abstract::Industrial development may result in the increase of environmental risks. The enzymatic transformation of polluting compounds to less toxic or even innocuous products is an alternative to their complete removal. In this regard, a number of different redox enzymes are able to transform a wide variety of toxic pollutant...

    journal_title:Microbial cell factories

    pub_type: 社论

    doi:10.1186/1475-2859-3-10

    authors: Garcia-Arellano H,Alcalde M,Ballesteros A

    更新日期:2004-08-02 00:00:00

  • Metabolic engineering of microorganisms for the production of L-arginine and its derivatives.

    abstract::L-arginine (ARG) is an important amino acid for both medicinal and industrial applications. For almost six decades, the research has been going on for its improved industrial level production using different microorganisms. While the initial approaches involved random mutagenesis for increased tolerance to ARG and con...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/s12934-014-0166-4

    authors: Shin JH,Lee SY

    更新日期:2014-12-03 00:00:00

  • Elevated CO2 improves both lipid accumulation and growth rate in the glucose-6-phosphate dehydrogenase engineered Phaeodactylum tricornutum.

    abstract:BACKGROUND:Numerous studies have shown that stress induction and genetic engineering can effectively increase lipid accumulation, but lead to a decrease of growth in the majority of microalgae. We previously found that elevated CO2 concentration increased lipid productivity as well as growth in Phaeodactylum tricornutu...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/s12934-019-1214-x

    authors: Wu S,Gu W,Huang A,Li Y,Kumar M,Lim PE,Huan L,Gao S,Wang G

    更新日期:2019-09-23 00:00:00

  • Over-expression and characterization of NS3 and NS5A of Hepatitis C virus genotype 3a.

    abstract:BACKGROUND:Hepatitis C virus (HCV) is a common and leading cause for liver cirrhosis and hepatocellular carcinoma. Current therapies to treat HCV infection are shown to be partially effective and poorly tolerated. Therefore, ample efforts are underway to rationally design therapies targeting the HCV non-structural prot...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/1475-2859-12-111

    authors: Anwar MI,Iqbal M,Yousef MS,Rahman M

    更新日期:2013-11-16 00:00:00

  • Isolation identification and biochemical characterization of a novel halo-tolerant lipase from the metagenome of the marine sponge Haliclona simulans.

    abstract:BACKGROUND:Lipases (EC 3.1.1.3) catalyze the hydrolysis of triacyl glycerol to glycerol and are involved in the synthesis of both short chain and long chain acylglycerols. They are widely used industrially in various applications, such as baking, laundry detergents and as biocatalysts in alternative energy strategies. ...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/1475-2859-11-72

    authors: Selvin J,Kennedy J,Lejon DP,Kiran GS,Dobson AD

    更新日期:2012-06-01 00:00:00

  • Customized microscale approach for optimizing two-phase bio-oxidations of alkanes with high reproducibility.

    abstract:BACKGROUND:Numerous challenges remain to achieve industrially competitive space-time yields for bio-oxidations. The ability to rapidly screen bioconversion reactions for characterization and optimization is of major importance in bioprocess development and biocatalyst selection; studies at conventional lab scale are ti...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/s12934-017-0788-4

    authors: Kolmar JF,Thum O,Baganz F

    更新日期:2017-10-10 00:00:00

  • One-step of tryptophan attenuator inactivation and promoter swapping to improve the production of L-tryptophan in Escherichia coli.

    abstract:BACKGROUND:L-tryptophan is an aromatic amino acid widely used in the food, chemical and pharmaceutical industries. In Escherichia coli, L-tryptophan is synthesized from phosphoenolpyruvate and erythrose 4-phosphate by enzymes in the shikimate pathway and L-tryptophan branch pathway, while L-serine and phosphoribosylpyr...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/1475-2859-11-30

    authors: Gu P,Yang F,Kang J,Wang Q,Qi Q

    更新日期:2012-03-02 00:00:00

  • Invertase Suc2-mediated inulin catabolism is regulated at the transcript level in Saccharomyces cerevisiae.

    abstract:BACKGROUND:Invertase Suc2 was recently identified as a key hydrolase for inulin catabolism in Saccharomyces cerevisiae, whereas the Suc2 activity degrading inulin varies greatly in different S. cerevisiae strains. The molecular mechanism causing such variation remained obscure. The aim of this study is to investigate h...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/s12934-015-0243-3

    authors: Yang F,Liu ZC,Wang X,Li LL,Yang L,Tang WZ,Yu ZM,Li X

    更新日期:2015-04-17 00:00:00

  • Heterologous expression of antigenic peptides in Bacillus subtilis biofilms.

    abstract:BACKGROUND:Numerous strategies have been developed for the display of heterologous proteins in the surface of live bacterial carriers, which can be used as vaccines, immune-modulators, cancer therapy or bioremediation. Bacterial biofilms have emerged as an interesting approach for the expression of proteins of interest...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/s12934-016-0532-5

    authors: Vogt CM,Schraner EM,Aguilar C,Eichwald C

    更新日期:2016-08-11 00:00:00

  • Active protein aggregates induced by terminally attached self-assembling peptide ELK16 in Escherichia coli.

    abstract:BACKGROUND:In recent years, it has been gradually realized that bacterial inclusion bodies (IBs) could be biologically active. In particular, several proteins including green fluorescent protein, β-galactosidase, β-lactamase, alkaline phosphatase, D-amino acid oxidase, polyphosphate kinase 3, maltodextrin phosphorylase...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/1475-2859-10-9

    authors: Wu W,Xing L,Zhou B,Lin Z

    更新日期:2011-02-15 00:00:00

  • Enhanced production of gamma-aminobutyrate (GABA) in recombinant Corynebacterium glutamicum strains from empty fruit bunch biosugar solution.

    abstract:BACKGROUND:Recent interest has been focused on the production of platform chemicals from renewable biomass due to increasing concerns on global warming and depletion of fossil fuel reserves. Microbial production of platform chemicals in biorefineries has been suggested to be a promising solution for these problems. Gam...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/s12934-018-0977-9

    authors: Baritugo KA,Kim HT,David Y,Khang TU,Hyun SM,Kang KH,Yu JH,Choi JH,Song JJ,Joo JC,Park SJ

    更新日期:2018-08-21 00:00:00

  • Identification, characterization of two NADPH-dependent erythrose reductases in the yeast Yarrowia lipolytica and improvement of erythritol productivity using metabolic engineering.

    abstract:BACKGROUND:Erythritol is a four-carbon sugar alcohol with sweetening properties that is used by the agro-food industry as a food additive. In the yeast Yarrowia lipolytica, the last step of erythritol synthesis involves the reduction of erythrose by specific erythrose reductase(s). In the earlier report, an erythrose r...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/s12934-018-0982-z

    authors: Cheng H,Wang S,Bilal M,Ge X,Zhang C,Fickers P,Cheng H

    更新日期:2018-08-29 00:00:00

  • Combined metabolic engineering of precursor and co-factor supply to increase α-santalene production by Saccharomyces cerevisiae.

    abstract:BACKGROUND:Sesquiterpenes are a class of natural products with a diverse range of attractive industrial proprieties. Due to economic difficulties of sesquiterpene production via extraction from plants or chemical synthesis there is interest in developing alternative and cost efficient bioprocesses. The hydrocarbon α-sa...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/1475-2859-11-117

    authors: Scalcinati G,Partow S,Siewers V,Schalk M,Daviet L,Nielsen J

    更新日期:2012-08-31 00:00:00

  • The comprehensive profile of fermentation products during in situ CO2 recycling by Rubisco-based engineered Escherichia coli.

    abstract:BACKGROUND:In our previous study, the feasibility of Rubisco-based engineered E. coli (that contains heterologous phosphoribulokinase (PrkA) and Rubisco) for in situ CO2 recycling during the fermentation of pentoses or hexoses was demonstrated. Nevertheless, it is perplexing to see that only roughly 70 % of the carbon ...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/s12934-016-0530-7

    authors: Yang CH,Liu EJ,Chen YL,Ou-Yang FY,Li SY

    更新日期:2016-08-02 00:00:00

  • Metabolic engineering of the purine biosynthetic pathway in Corynebacterium glutamicum results in increased intracellular pool sizes of IMP and hypoxanthine.

    abstract:BACKGROUND:Purine nucleotides exhibit various functions in cellular metabolism. Besides serving as building blocks for nucleic acid synthesis, they participate in signaling pathways and energy metabolism. Further, IMP and GMP represent industrially relevant biotechnological products used as flavor enhancing additives i...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/1475-2859-11-138

    authors: Peifer S,Barduhn T,Zimmet S,Volmer DA,Heinzle E,Schneider K

    更新日期:2012-10-24 00:00:00

  • Low-mutation-rate, reduced-genome Escherichia coli: an improved host for faithful maintenance of engineered genetic constructs.

    abstract:BACKGROUND:Molecular mechanisms generating genetic variation provide the basis for evolution and long-term survival of a population in a changing environment. In stable, laboratory conditions, the variation-generating mechanisms are dispensable, as there is limited need for the cell to adapt to adverse conditions. In f...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/1475-2859-11-11

    authors: Csörgo B,Fehér T,Tímár E,Blattner FR,Pósfai G

    更新日期:2012-01-20 00:00:00

  • Carbohydrate catabolic flexibility in the mammalian intestinal commensal Lactobacillus ruminis revealed by fermentation studies aligned to genome annotations.

    abstract:BACKGROUND:Lactobacillus ruminis is a poorly characterized member of the Lactobacillus salivarius clade that is part of the intestinal microbiota of pigs, humans and other mammals. Its variable abundance in human and animals may be linked to historical changes over time and geographical differences in dietary intake of...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/1475-2859-10-S1-S12

    authors: O'Donnell MM,Forde BM,Neville B,Ross PR,O'Toole PW

    更新日期:2011-08-30 00:00:00

  • The functional capacity of plantaricin-producing Lactobacillus plantarum SF9C and S-layer-carrying Lactobacillus brevis SF9B to withstand gastrointestinal transit.

    abstract:BACKGROUND:We evaluated the functional capacity of plantaricin-producing Lactobacillus plantarum SF9C and S-layer-carrying Lactobacillus brevis SF9B to withstand gastrointestinal transit and to compete among the gut microbiota in vivo. Considering the probiotic potential of Lb. brevis SF9B, this study aims to investiga...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/s12934-020-01365-6

    authors: Butorac K,Banić M,Novak J,Leboš Pavunc A,Uroić K,Durgo K,Oršolić N,Kukolj M,Radović S,Scalabrin S,Žučko J,Starčević A,Šušković J,Kos B

    更新日期:2020-05-19 00:00:00

  • Overexpression of a C4-dicarboxylate transporter is the key for rerouting citric acid to C4-dicarboxylic acid production in Aspergillus carbonarius.

    abstract:BACKGROUND:C4-dicarboxylic acids, including malic acid, fumaric acid and succinic acid, are valuable organic acids that can be produced and secreted by a number of microorganisms. Previous studies on organic acid production by Aspergillus carbonarius, which is capable of producing high amounts of citric acid from varie...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/s12934-017-0660-6

    authors: Yang L,Christakou E,Vang J,Lübeck M,Lübeck PS

    更新日期:2017-03-14 00:00:00

  • Production of human blood group B antigen epitope conjugated protein in Escherichia coli and utilization of the adsorption blood group B antibody.

    abstract:BACKGROUND:In the process of ABO-incompatible (ABOi) organ transplantation, removal of anti-A and/or B antibodies from blood plasma is a promising method to overcome hyperacute rejection and allograft loss caused by the immune response between anti-A and/or B antibodies and the A and/or B antigens in the recipient. Alt...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/s12934-016-0538-z

    authors: Shang W,Zhai Y,Ma Z,Yang G,Ding Y,Han D,Li J,Zhang H,Liu J,Wang PG,Liu XW,Chen M

    更新日期:2016-08-11 00:00:00

  • Metabolic engineering of indole pyruvic acid biosynthesis in Escherichia coli with tdiD.

    abstract:BACKGROUND:Indole pyruvic acid (IPA) is a versatile platform intermediate and building block for a number of high-value products in the pharmaceutical and food industries. It also has a wide range of applications, such as drugs for the nervous system, cosmetics, and luminophores. Chemical synthesis of IPA is a complica...

    journal_title:Microbial cell factories

    pub_type: 杂志文章

    doi:10.1186/s12934-016-0620-6

    authors: Zhu Y,Hua Y,Zhang B,Sun L,Li W,Kong X,Hong J

    更新日期:2017-01-03 00:00:00